1
|
Ji D, Zhao J, Liu Y, Wei D. Electrical Nanobiosensors for Nucleic Acid Based Diagnostics. J Phys Chem Lett 2023; 14:4084-4095. [PMID: 37125726 DOI: 10.1021/acs.jpclett.3c00495] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Recent advances in nanotechnologies have promoted the iterative updating of nucleic acid sensors. Among various sensing technologies, the electrical nanobiosensor is regarded as one of the most promising prospects to achieve rapid, precise, and point-of-care nucleic acid based diagnostics. In this Perspective, we introduce recent progresses in electrical nanobiosensors for nucleic acid detection. First, the strategies for improving detection performance are summarized, including chemical amplification and electrical amplification. Then, the detection mechanism of electrical nanobiosensors, such as electrochemical biosensors, field-effect transistors, and photoelectric enhanced biosensors, is illustrated. At the same time, their applications in cancer screening, pathogen detection, gene sequencing, and genetic disease diagnosis are introduced. Finally, challenges and future prospects in clinical application are discussed.
Collapse
Affiliation(s)
- Daizong Ji
- State Key Laboratory of Molecular Engineering of Polymers, Fudan University, Shanghai 200433, China
- Department of Macromolecular Science, Fudan University, Shanghai 200433, China
- Laboratory of Molecular Materials and Devices, Fudan University, Shanghai 200433, China
| | - Junhong Zhao
- State Key Laboratory of Molecular Engineering of Polymers, Fudan University, Shanghai 200433, China
- Department of Macromolecular Science, Fudan University, Shanghai 200433, China
- Laboratory of Molecular Materials and Devices, Fudan University, Shanghai 200433, China
| | - Yunqi Liu
- Laboratory of Molecular Materials and Devices, Fudan University, Shanghai 200433, China
- Institute of Chemistry, Chinese Academy of Science, Beijing 100190, China
| | - Dacheng Wei
- State Key Laboratory of Molecular Engineering of Polymers, Fudan University, Shanghai 200433, China
- Department of Macromolecular Science, Fudan University, Shanghai 200433, China
- Laboratory of Molecular Materials and Devices, Fudan University, Shanghai 200433, China
| |
Collapse
|
2
|
Development of environmental DNA chip for monitoring the invasive alien fishes in dam reservoirs. LANDSCAPE AND ECOLOGICAL ENGINEERING 2022. [DOI: 10.1007/s11355-022-00513-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
3
|
Verma V, Kala D, Gupta S, Kumar H, Kaushal A, Kuča K, Cruz-Martins N, Kumar D. Leptospira interrogans Outer Membrane Protein-Based Nanohybrid Sensor for the Diagnosis of Leptospirosis. SENSORS (BASEL, SWITZERLAND) 2021; 21:2552. [PMID: 33917354 PMCID: PMC8038715 DOI: 10.3390/s21072552] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Revised: 03/22/2021] [Accepted: 03/30/2021] [Indexed: 02/07/2023]
Abstract
Leptospirosis is an underestimated tropical disease caused by the pathogenic Leptospira species and responsible for several serious health problems. Here, we aimed to develop an ultrasensitive DNA biosensor for the rapid and on-site detection of the Loa22 gene of Leptospira interrogans using a gold nanoparticle-carbon nanofiber composite (AuN/CNF)-based screen-printed electrode. Cyclic voltammetry and electrochemical impedance were performed for electrochemical analysis. The sensitivity of the sensor was 5431.74 μA/cm2/ng with a LOD (detection limit) of 0.0077 ng/μL using cyclic voltammetry. The developed DNA biosensor was found highly specific to the Loa22 gene of L. interrogans, with a storage stability at 4 °C for 180 days and a 6% loss of the initial response. This DNA-based sensor only takes 30 min for rapid detection of the pathogen, with a higher specificity and sensitivity. The promising results obtained suggest the application of the developed sensor as a point of care device for the diagnosis of leptospirosis.
Collapse
Affiliation(s)
- Vivek Verma
- School of Bioengineering and Food Technology, Shoolini University, Solan 173229, HP, India; (V.V.); (H.K.)
| | - Deepak Kala
- Amity Center of Nanotechnology, Amity University, Gurugram 122413, HR, India;
| | - Shagun Gupta
- College of Horticulture & Forestry-Neri, Hamirpur 177001, HP, India;
| | - Harsh Kumar
- School of Bioengineering and Food Technology, Shoolini University, Solan 173229, HP, India; (V.V.); (H.K.)
| | - Ankur Kaushal
- Amity Center of Nanotechnology, Amity University, Gurugram 122413, HR, India;
| | - Kamil Kuča
- Center for Basic and Applied Research, Faculty of Informatics and Management, University of Hradec Kralove, 50003 Hradec Kralove, Czech Republic;
| | - Natália Cruz-Martins
- Faculty of Medicine, University of Porto, Alameda Prof. Hernâni Monteiro, 4200-319 Porto, Portugal
- Institute for Research and Innovation in Health (i3S), University of Porto, 4200-135 Porto, Portugal
- Laboratory of Neuropsychophysiology, Faculty of Psychology and Education Sciences, University of Porto, 4200-135 Porto, Portugal
| | - Dinesh Kumar
- School of Bioengineering and Food Technology, Shoolini University, Solan 173229, HP, India; (V.V.); (H.K.)
| |
Collapse
|
4
|
AuNPs/CNF-modified DNA biosensor for early and quick detection of O. tsutsugamushi in patients suffering from scrub typhus. 3 Biotech 2020; 10:446. [PMID: 33014689 DOI: 10.1007/s13205-020-02432-w] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2020] [Accepted: 09/08/2020] [Indexed: 01/20/2023] Open
Abstract
A novel approach has been developed for the detection of 56 kDa tissue-specific antigen (TSA) gene of Orientia tsutsugamushi a causative agent of scrub typhus disease. The approach was developed by immobilization of 5' NH2 labeled ssDNA probe selective to 56 kDa TSA gene, to the surface of AuNPs/CNF modified screen-printed electrode. An electrochemical response was recorded with single stranded genomic DNA (ssDNA) of O. tsutsugamushi isolated from patient sample, using cyclic voltammetry and electrochemical impedance spectroscopy. The electrode surface was characterized by Field-Emission Scanning electron microscope (FE-SEM), Fourier Transform Infrared Spectroscopy (FTIR) and Raman Spectroscopy at each step of fabrication. The DNA biosensor shows optimum response within 50-60 s at room temperature (25 ± 3 °C). The sensor shows higher sensitivity [7849 (µA/cm2)/ng DNA], fast response time (60 s), wider linear range (0.04-2.6 ng) with limit of detection of 0.02 ng/µl of ssDNA sample.
Collapse
|
5
|
Antibody Modified Gold Electrode as an Impedimetric Biosensor for the Detection of Streptococcus pyogenes. SENSORS 2020; 20:s20185324. [PMID: 32957594 PMCID: PMC7570824 DOI: 10.3390/s20185324] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/05/2020] [Revised: 09/09/2020] [Accepted: 09/15/2020] [Indexed: 12/31/2022]
Abstract
Streptococcus pyogenes is a known cause of a wide spectrum of diseases, from mild and acute to severe invasive infections. This paper concerns the development of a novel impedimetric biosensor for the detection of the mentioned human pathogen. The proposed biosensor is a gold disk electrode modified with commercially available antibodies attached to the surface of the electrode by carbodiimide chemistry. The conducted tests confirmed the specificity of the antibodies used, which was also demonstrated by the results obtained during the detection of S. pyogenes using electrochemical impedance spectroscopy. The developed sensor successfully detected the presence of S. pyogenes in the sample and the detection limit was calculated as 9.3 cfu/mL. The results obtained show a wide linear range for verified concentrations of this pathogen in a sample from 4.2 × 102 to 4.2 × 106 cfu/mL. Furthermore, the optimal experimentally determined time required to perform pathogen detection in the sample was estimated as 3 min, and the test did not lead to the degradation of the sample.
Collapse
|
6
|
Kala D, Gupta S, Nagraik R, Verma V, Thakur A, Kaushal A. Diagnosis of scrub typhus: recent advancements and challenges. 3 Biotech 2020; 10:396. [PMID: 32834918 PMCID: PMC7431554 DOI: 10.1007/s13205-020-02389-w] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2020] [Accepted: 08/10/2020] [Indexed: 02/07/2023] Open
Abstract
Scrub typhus is a mite-borne, acute febrile illness caused by the bacterium Orientia tsutsugamushi. It is a re-emerging infectious disease of the tsutsugamushi triangle. Scrub typhus is transmitted through bites of contaminated chiggers (larval stage). Diagnosis of scrub typhus is challenging as its symptoms mimic with other acute febrile illnesses. Several methods are effectual for diagnosis of scrub typhus that includes enzyme-linked immunosorbent assay (ELISA), immunofluorescence assay (IFA), immunochromatographic test (ICT), Weil-Felix, polymerase chain reaction (PCR) and loop-mediated isothermal amplification (LAMP). Weil-Felix test was initially used for the diagnosis of scrub typhus in underdeveloped countries but not preferred due to a lack of both specificity and sensitivity. Other immuno-based methods like IFA and ELISA are most outrank for detection of scrub typhus due to their higher sensitivity and specificity, but not vigorous to lay bare the infection at early stages and need the convalescent sampling for verification of positive samples. On another deed, PCR based methods becoming acceptable over era due to its dexterity of early-stage diagnosis with higher specificity and sensitivity but lack its applicability in circumstances of scrub typhus due to the variegated genetic makeup of Orientia tsutsugamushi among its serotypes. The present review focused on various detection methods along with their advantages and disadvantages used in the diagnosis of scrub typhus. A comparison between available methods of diagnosis with challenges in the detection of scrub typhus is also summarized.
Collapse
Affiliation(s)
- Deepak Kala
- Amity Center of Nanotechnology, Amity University, Haryana, 122413 India
| | | | | | | | - Atul Thakur
- Amity Center of Nanotechnology, Amity University, Haryana, 122413 India
| | - Ankur Kaushal
- Amity Center of Nanotechnology, Amity University, Haryana, 122413 India
| |
Collapse
|
7
|
Desai D, Kumar A, Bose D, Datta M. Ultrasensitive sensor for detection of early stage chronic kidney disease in human. Biosens Bioelectron 2018; 105:90-94. [DOI: 10.1016/j.bios.2018.01.031] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2017] [Revised: 01/11/2018] [Accepted: 01/15/2018] [Indexed: 12/20/2022]
|
8
|
Kozitsina AN, Svalova TS, Malysheva NN, Okhokhonin AV, Vidrevich MB, Brainina KZ. Sensors Based on Bio and Biomimetic Receptors in Medical Diagnostic, Environment, and Food Analysis. BIOSENSORS 2018; 8:E35. [PMID: 29614784 PMCID: PMC6022999 DOI: 10.3390/bios8020035] [Citation(s) in RCA: 71] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/15/2018] [Revised: 03/29/2018] [Accepted: 03/29/2018] [Indexed: 01/09/2023]
Abstract
Analytical chemistry is now developing mainly in two areas: automation and the creation of complexes that allow, on the one hand, for simultaneously analyzing a large number of samples without the participation of an operator, and on the other, the development of portable miniature devices for personalized medicine and the monitoring of a human habitat. The sensor devices, the great majority of which are biosensors and chemical sensors, perform the role of the latter. That last line is considered in the proposed review. Attention is paid to transducers, receptors, techniques of immobilization of the receptor layer on the transducer surface, processes of signal generation and detection, and methods for increasing sensitivity and accuracy. The features of sensors based on synthetic receptors and additional components (aptamers, molecular imprinted polymers, biomimetics) are discussed. Examples of bio- and chemical sensors' application are given. Miniaturization paths, new power supply means, and wearable and printed sensors are described. Progress in this area opens a revolutionary era in the development of methods of on-site and in-situ monitoring, that is, paving the way from the "test-tube to the smartphone".
Collapse
Affiliation(s)
- Alisa N Kozitsina
- Department of Analytical Chemistry, Institute of Chemical Engineering, Ural Federal University named after the first President of Russia B.N. Yeltsin, 620002 Yekaterinburg, Russia.
| | - Tatiana S Svalova
- Department of Analytical Chemistry, Institute of Chemical Engineering, Ural Federal University named after the first President of Russia B.N. Yeltsin, 620002 Yekaterinburg, Russia.
| | - Natalia N Malysheva
- Department of Analytical Chemistry, Institute of Chemical Engineering, Ural Federal University named after the first President of Russia B.N. Yeltsin, 620002 Yekaterinburg, Russia.
| | - Andrei V Okhokhonin
- Department of Analytical Chemistry, Institute of Chemical Engineering, Ural Federal University named after the first President of Russia B.N. Yeltsin, 620002 Yekaterinburg, Russia.
| | - Marina B Vidrevich
- Scientific and Innovation Center for Sensory Technologies, Ural State University of Economics, 620144 Yekaterinburg, Russia.
| | - Khiena Z Brainina
- Department of Analytical Chemistry, Institute of Chemical Engineering, Ural Federal University named after the first President of Russia B.N. Yeltsin, 620002 Yekaterinburg, Russia.
- Scientific and Innovation Center for Sensory Technologies, Ural State University of Economics, 620144 Yekaterinburg, Russia.
| |
Collapse
|
9
|
Chen Y, Wang Z, Liu Y, Wang X, Li Y, Ma P, Gu B, Li H. Recent advances in rapid pathogen detection method based on biosensors. Eur J Clin Microbiol Infect Dis 2018; 37:1021-1037. [DOI: 10.1007/s10096-018-3230-x] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2018] [Accepted: 03/12/2018] [Indexed: 12/28/2022]
|
10
|
Kashish, Bansal S, Jyoti A, Mahato K, Chandra P, Prakash R. Highly Sensitive in vitro
Biosensor for Enterotoxigenic Escherichia coli
Detection Based on ssDNA Anchored on PtNPs-Chitosan Nanocomposite. ELECTROANAL 2017. [DOI: 10.1002/elan.201600169] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Kashish
- School of Materials Science and Technology; Indian Institute of Technology (Banaras Hindu University); Varanasi- 221005 India
| | - Surbhi Bansal
- Amity Institute of Biotechnology; Amity University Madhya Pradesh; Gwalior- 474 005 India
| | - Anurag Jyoti
- Amity Institute of Biotechnology; Amity University Madhya Pradesh; Gwalior- 474 005 India
| | - Kuldeep Mahato
- Department of Biosciences and Bioengineering; Indian Institute of Technology Guwahati; Guwahati 781 039, Assam India
| | - Pranjal Chandra
- Department of Biosciences and Bioengineering; Indian Institute of Technology Guwahati; Guwahati 781 039, Assam India
| | - Rajiv Prakash
- School of Materials Science and Technology; Indian Institute of Technology (Banaras Hindu University); Varanasi- 221005 India
| |
Collapse
|