Prediction of arsenic and antimony transporter major intrinsic proteins from the genomes of crop plants

Managing antimony pollution: Insights into Soil-Plant system dynamics and remediation Strategies

Researchers are increasingly concerned about antimony (Sb) in ecosystems and the environment. Sb primarily enters the environment through anthropogenic (urbanization, industries, coal mining, cars, and biosolid wastes) and geological (natural and chemical weathering of parent material, leaching, and wet deposition) processes. Sb is a hazardous metal that can potentially harm human health. However, no comprehensive information is available on its sources, how it behaves in soil, and its bioaccumulation. Thus, this study reviews more than 160 peer-reviewed studies examining Sb's origins, geochemical distribution and speciation in soil, biogeochemical mechanisms regulating Sb mobilization, bioavailability, and plant phytotoxicity. In addition, Sb exposure effects plant physio-morphological and biochemical attributes were investigated. The toxicity of Sb has a pronounced impact on various aspects of plant life, including a reduction in seed germination and impeding plant growth and development, resulting from restricted essential nutrient uptake, oxidative damages, disruption of photosynthetic system, and amino acid and protein synthesis. Various widely employed methods for Sb remediation, such as organic manure and compost, coal fly ash, biochar, phytoremediation, microbial-based bioremediation, micronutrients, clay minerals, and nanoremediation, are reviewed with a critical assessment of their effectiveness, cost-efficiency, and suitability for use in agricultural soils. This review shows how plants deal with Sb stress, providing insights into lowering Sb levels in the environment and lessening risks to ecosystems and human health along the food chain. Examining different methods like bioaccumulation, bio-sorption, electrostatic attraction, and complexation actively works to reduce toxicity in contaminated agricultural soil caused by Sb. In the end, the exploration of recent advancements in genetics and molecular biology techniques are highlighted, which offers valuable insights into combating Sb toxicity. In conclusion, the findings of this comprehensive review should help develop innovative and useful strategies for minimizing Sb absorption and contamination and thus successfully managing Sb-polluted soil and plants to reduce environmental and public health risks.

Aquaporin LjNIP1;5 positively modulates drought tolerance by promoting arbuscular mycorrhizal symbiosis in Lotus japonicus

Drought stress often affects crop growth and even causes crop death, while aquaporins can maintain osmotic balance by transporting water across membranes, so it is important to study how to improve drought tolerance of crops by using aquaporins. In this work, we characterize a set of subfamily members named NIPs belonging to the family of aquaporins in Lotus japonicus, grouping 14 family members based on the sequence similarity in the aromatic/arginine (Ar/R) region. Among these members, LjNIP1;5 is one of the genes with the highest expression in roots which is induced by the AM fungus. In Lotus japonicus, LjNIP1;5 is highly expressed in symbiotic roots, and its promoter can be induced by drought stress and AM fungus. Root colonization analysis reveals that ljnip1:5 mutant exhibits lower mycorrhizal colonization than the wild type, with increasing the proportion of large arbuscule, and fewer arbuscule produced by symbiosis under drought stress. In the LjNIP1;5OE plant, we detected a strong antioxidant capacity compared to the control, and LjNIP1;5OE showed higher stem length under drought stress. Taken together, the current results facilitate our comprehensive understanding of the plant adaptive to drought stress with the coordination of the specific fungi.

Do Antimonite and Silicon Share the Same Root Uptake Pathway by Lsi1 in Sorghum bicolor L. Moench?

A study was conducted to further develop our understanding of antimony (Sb) uptake in plants. Unlike other metal(loid)s, such as silicon (Si), the mechanisms of Sb uptake are not well understood. However, SbIII is thought to enter the cell via aquaglyceroporins. We investigated if the channel protein Lsi1, which aids in Si uptake, also plays a role in Sb uptake. Seedlings of WT sorghum, with normal silicon accumulation, and its mutant (sblsi1), with low silicon accumulation, were grown in Hoagland solution for 22 days in the growth chamber under controlled conditions. Control, Sb (10 mg Sb L^-1), Si (1mM) and Sb + Si (10 mg Sb L^-1 + 1 mM Si) were the treatments. After 22 days, root and shoot biomass, the concentration of elements in root and shoot tissues, lipid peroxidation and ascorbate levels, and relative expression of Lsi1 were determined. When mutant plants were exposed to Sb, they showed almost no toxicity symptoms compared to WT plants, indicating that Sb was not toxic to mutant plants. On the other hand, WT plants had decreased root and shoot biomass, increased MDA content and increased Sb uptake compared to mutant plants. In the presence of Sb, we also found that SbLsi1 was downregulated in the roots of WT plants. The results of this experiment support the role of Lsi1 in Sb uptake in sorghum plants.

Transcriptomic analysis reveals the molecular mechanisms of Boehmeria nivea L. in response to antimonite and antimonate stresses

Soil antimony (Sb) pollution is a global concern that threatens food security and human health. Boehmeria nivea L. (ramie) is a promising phytoremediation plant exhibiting high tolerance and enrichment capacity for Sb. To reveal the molecular mechanisms and thus enhance the ramie uptake, transport, and detoxification of Sb with practical strategies, a hydroponic experiment was conducted to compare the physiological and transcriptomic responses of ramie towards antimonite (Sb(Ⅲ)) and antimonate (Sb(Ⅴ)). Phenotypic results showed that Sb(Ⅲ) had a stronger inhibitory effect on the growth of ramie. Root Sb content under Sb(Ⅲ) was 2.43 times higher than that in Sb(Ⅴ) treatment. Based on the ribonucleic acid sequencing (RNA-Seq) technique, 3915 and 999 significant differentially expressed genes (DEGs) were identified under Sb(Ⅲ) and Sb(Ⅴ), respectively. Transcriptomic analysis revealed that ramie showed different adaptation strategies to Sb(Ⅲ) and Sb(V). Key DEGs and their involved pathways such as catalytic activity, carbohydrate metabolisms, phenylpropanoid biosynthesis, and cell wall modification were identified to perform crucial roles in Sb tolerance and detoxification. Two heavy metal-associated domain-type genes, six heavy metal-associated isoprenylated plant proteins, and nine ABC transporters showed possible roles in the transport and detoxification of Sb. The significant upregulation of NRAMP5 and three NIPs suggested their roles in the transport of Sb(V). This study is the basis for future research to identify the exact genes and biological processes that can effectively enhance Sb accumulation or improve plant tolerance to Sb, thereby promoting the phytoremediation of Sb-polluted soils.

Aquaporin-mediated transport: Insights into metalloid trafficking

Metalloids in plants have diverse physiological effects. From being essential to beneficial to toxic, they have significant effects on many physiological processes, influencing crop yield and quality. Aquaporins are a group of membrane channels that have several physiological substrates along with water. Metalloids have emerged as one of their important substrates and they are found to have a substantial role in regulating plant metalloid homeostasis. The present review comprehensively details the multiple isoforms of aquaporins having specificity for metalloids and being responsible for their influx, distribution or efflux. In addition, it also highlights the usage of aquaporin-mediated transport as a selection marker in toxic screens and as tracer elements for closely related metalloids. Therefore, aquaporins, with their imperative contribution to the regulation of plant growth, development and physiological processes, need more research to unravel the metalloid trafficking mechanisms and their future applications.

Human Aquaporins: Functional Diversity and Potential Roles in Infectious and Non-infectious Diseases

Aquaporins (AQPs) are integral membrane proteins and found in all living organisms from bacteria to human. AQPs mainly involved in the transmembrane diffusion of water as well as various small solutes in a bidirectional manner are widely distributed in various human tissues. Human contains 13 AQPs (AQP0-AQP12) which are divided into three sub-classes namely orthodox aquaporin (AQP0, 1, 2, 4, 5, 6, and 8), aquaglyceroporin (AQP3, 7, 9, and 10) and super or unorthodox aquaporin (AQP11 and 12) based on their pore selectivity. Human AQPs are functionally diverse, which are involved in wide variety of non-infectious diseases including cancer, renal dysfunction, neurological disorder, epilepsy, skin disease, metabolic syndrome, and even cardiac diseases. However, the association of AQPs with infectious diseases has not been fully evaluated. Several studies have unveiled that AQPs can be regulated by microbial and parasitic infections that suggest their involvement in microbial pathogenesis, inflammation-associated responses and AQP-mediated cell water homeostasis. This review mainly aims to shed light on the involvement of AQPs in infectious and non-infectious diseases and potential AQPs-target modulators. Furthermore, AQP structures, tissue-specific distributions and their physiological relevance, functional diversity and regulations have been discussed. Altogether, this review would be useful for further investigation of AQPs as a potential therapeutic target for treatment of infectious as well as non-infectious diseases.

Alleviation mechanisms of metal(loid) stress in plants by silicon: a review

Silicon (Si), although not considered as an essential element for plants in general, can ameliorate the phytotoxicity induced by excess metal(loid)s whether non-essential (e.g. Cd, Pb, Cr, Al, As, and Sb) or essential (e.g. Cu, Ni, and Zn). The Si-enhanced resistance allowing plants to cope with this type of abiotic stress has been developed at multiple levels in plants. Restriction of root uptake and immobilization of metal(loid)s in the rhizosphere by Si is probably one of the first defence mechanism. Further, retention of elements in the root apoplasm might enhance the resistance and vigour of plants. At the cellular level, the formation of insoluble complexes between Si and metal(loid)s and their storage within cell walls help plants to decrease available element concentration and restrict symplasmic uptake. Moreover, Si influences the oxidative status of plants by modifying the activity of various antioxidants, improves membrane stability, and acts on gene expression, although its exact role in these processes is still not well understood. This review focuses on all currently known plant-based mechanisms related to Si supply and involved in amelioration of stress caused by excess metal(loid)s.

Biodegradation of reactive textile dye Novacron Super Black G by free cells of newly isolated Alcaligenes faecalis AZ26 and Bacillus spp obtained from textile effluents

Bacteria were isolated from effluents of textile industries and screened by their capability to decolorize at least one of eight reactive dyes used in the textile industries. Three isolates having the capability to decolorize the highest number of dyes with more than 25% of decolorization were identified as Alcaligenes faecalis AZ26, Bacillus cereus AZ27 and Bacillus sp. AZ28 based on morphological, cultural, biochemical characteristics, and 16S rDNA sequence analysis. The decolorization capability of these three bacterial isolates was optimized under different physicochemical conditions by using Novacron Super Black G (NSB-G), one of the eight reactive dyes commonly used in textile industries. These bacterial isolates grew well in the presence of up to 500 mg L⁻¹ of NSB-G and showed decolorization of approximately 90% at 200 mg L⁻¹ of NSB-G after 96 h of cultivation at 37 °C and pH 8.0 under static condition. Decolorization of NSB-G by the bacterial isolates was investigated using UV-VIS spectrophotometry and Fourier Transform Infrared Spectroscopy (FTIR) analysis. The UV-visible absorbance spectra and the FTIR spectrum of the decolorized NSB-G significantly differed from those of the parent dye, indicating that the NSB-G was degraded by the bacterial isolates. High decolorization extent supports the notion that the bacterial isolates reported herein might have potential in the biological treatment of dyeing mill effluents.