1
|
Zhang X, Xu H, Sun R, Xiong G, Shi X. An insight into G-quadruplexes: Identification and potential therapeutic targets in livestock viruses. Eur J Med Chem 2024; 279:116848. [PMID: 39255642 DOI: 10.1016/j.ejmech.2024.116848] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2024] [Revised: 08/28/2024] [Accepted: 09/03/2024] [Indexed: 09/12/2024]
Abstract
G-quadruplexes (G4s) are non-canonical nucleic acids secondary structures that involve in the regulation of some key biological processes, such as replication, transcription, and translation. G4s have been extensively described in the genomes of human and related diseases. In recent years, G4s were identified in several livestock viruses, including those of the emerging epidemics, like Nipah virus (NiV). Since their discovery, G4s have been developed as the potential antiviral targets, and the employment of G4 ligands or interacting proteins has helped to expound the viral infectivity and pathogenesis through G4-mediated mechanisms, and highlight the potential as therapeutic approaches. However, the comprehensively studies of G4s in livestock viruses have not been summarized. This review delves into the reported literatures of G4s in livestock viruses, particular focus on the presence, biophysical identification, and possible function of G4s in viral genome, summarizing the G4 ligands, interacted proteins and aptamers on antiviral applications. The strengths and the challenges of G4 targeting in this field are also discussed. Therefore, this review will shed new light on the future development of highly potent and targeting antiviral therapy.
Collapse
Affiliation(s)
- Xianpeng Zhang
- Laboratory of Pesticide Toxicology and Pesticide Efficient Utilization, College of Agronomy, Jiangxi Agricultural University, Nanchang, Jiangxi Province, 330045, PR China; Key Laboratory of Crop Physiology Ecology & Genetic Breeding, Jiangxi Agriculture University, Nanchang, Jiangxi Province, 330045, PR China
| | - Hongyu Xu
- College of Land Resources and Environment, Jiangxi Agricultural University, Nanchang, Jiangxi Province, 330045, PR China
| | - Ranran Sun
- Laboratory of Pesticide Toxicology and Pesticide Efficient Utilization, College of Agronomy, Jiangxi Agricultural University, Nanchang, Jiangxi Province, 330045, PR China
| | - Guihong Xiong
- Key Laboratory of Crop Physiology Ecology & Genetic Breeding, Jiangxi Agriculture University, Nanchang, Jiangxi Province, 330045, PR China
| | - Xugen Shi
- Laboratory of Pesticide Toxicology and Pesticide Efficient Utilization, College of Agronomy, Jiangxi Agricultural University, Nanchang, Jiangxi Province, 330045, PR China; Key Laboratory of Crop Physiology Ecology & Genetic Breeding, Jiangxi Agriculture University, Nanchang, Jiangxi Province, 330045, PR China; Jiangxi Xiajiang Dry Direct-seeded Rice Science and Technology Backyard, Ji'an, Jiangxi Province, 331400, PR China.
| |
Collapse
|
2
|
Devi S, Sharma N, Ahmed T, Huma ZI, Kour S, Sahoo B, Singh AK, Macesic N, Lee SJ, Gupta MK. Aptamer-based diagnostic and therapeutic approaches in animals: Current potential and challenges. Saudi J Biol Sci 2021; 28:5081-5093. [PMID: 34466086 PMCID: PMC8381015 DOI: 10.1016/j.sjbs.2021.05.031] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Revised: 05/11/2021] [Accepted: 05/12/2021] [Indexed: 01/19/2023] Open
Abstract
Fast and precise diagnosis of infectious and non-infectious animal diseases and their targeted treatments are of utmost importance for their clinical management. The existing biochemical, serological and molecular methods of disease diagnosis need improvement in their specificity, sensitivity and cost and, are generally not amenable for being used as points-of-care (POC) device. Further, with dramatic changes in environment and farm management practices, one should also arm ourselves and prepare for emerging and re-emerging animal diseases such as cancer, prion diseases, COVID-19, influenza etc. Aptamer – oligonucleotide or short peptides that can specifically bind to target molecules – have increasingly become popular in developing biosensors for sensitive detection of analytes, pathogens (bacteria, virus, fungus, prions), drug residues, toxins and, cancerous cells. They have also been proven successful in the cellular delivery of drugs and targeted therapy of infectious diseases and physiological disorders. However, the in vivo application of aptamer-mediated biosensing and therapy in animals has been limited. This paper reviews the existing reports on the application of aptamer-based biosensors and targeted therapy in animals. It also dissects the various modifications to aptamers that were found to be successful in in vivo application of the aptamers in diagnostics and therapeutics. Finally, it also highlights major challenges and future directions in the application of aptamers in the field of veterinary medicine.
Collapse
Affiliation(s)
- Sapna Devi
- Division of Veterinary Medicine, Faculty of Veterinary Sciences & A.H., Sher-e-Kashmir University of Agricultural Sciences & Technology of Jammu, R.S. Pura, Jammu, J & K, India
| | - Neelesh Sharma
- Division of Veterinary Medicine, Faculty of Veterinary Sciences & A.H., Sher-e-Kashmir University of Agricultural Sciences & Technology of Jammu, R.S. Pura, Jammu, J & K, India
- Corresponding author at: Division of Veterinary Medicine, Faculty of Veterinary Sciences & A.H., Sher-e-Kashmir University of Agricultural Sciences & Technology of Jammu, Jammu and Kashmir 181102, India.
| | - Touqeer Ahmed
- Division of Veterinary Medicine, Faculty of Veterinary Sciences & A.H., Sher-e-Kashmir University of Agricultural Sciences & Technology of Jammu, R.S. Pura, Jammu, J & K, India
| | - Zul I. Huma
- Division of Veterinary Medicine, Faculty of Veterinary Sciences & A.H., Sher-e-Kashmir University of Agricultural Sciences & Technology of Jammu, R.S. Pura, Jammu, J & K, India
| | - Savleen Kour
- Division of Veterinary Medicine, Faculty of Veterinary Sciences & A.H., Sher-e-Kashmir University of Agricultural Sciences & Technology of Jammu, R.S. Pura, Jammu, J & K, India
| | - Bijayalaxmi Sahoo
- Gene Manipulation Laboratory, Department of Biotechnology and Medical Engineering, National Institute of Technology Rourkela, Odisha, India
| | - Amit Kumar Singh
- Experimental Animal Facility, National JALMA Institute of Leprosy and Other Mycobacterial Diseases, Agra, U.P., India
| | - Nino Macesic
- Clinic for Reproduction and Theriogenology, Faculty of Veterinary Medicine, University of Zagreb, Zagreb, Croatia
| | - Sung Jin Lee
- College of Animal Life Sciences, Kangwon National University, Chuncheon, South Korea
| | - Mukesh Kumar Gupta
- Gene Manipulation Laboratory, Department of Biotechnology and Medical Engineering, National Institute of Technology Rourkela, Odisha, India
| |
Collapse
|
3
|
Wan Q, Liu X, Zu Y. Oligonucleotide aptamers for pathogen detection and infectious disease control. Theranostics 2021; 11:9133-9161. [PMID: 34522231 PMCID: PMC8419047 DOI: 10.7150/thno.61804] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2021] [Accepted: 08/04/2021] [Indexed: 12/21/2022] Open
Abstract
During an epidemic or pandemic, the primary task is to rapidly develop precise diagnostic approaches and effective therapeutics. Oligonucleotide aptamer-based pathogen detection assays and control therapeutics are promising, as aptamers that specifically recognize and block pathogens can be quickly developed and produced through simple chemical synthesis. This work reviews common aptamer-based diagnostic techniques for communicable diseases and summarizes currently available aptamers that target various pathogens, including the SARS-CoV-2 virus. Moreover, this review discusses how oligonucleotide aptamers might be leveraged to control pathogen propagation and improve host immune system responses. This review offers a comprehensive data source to the further develop aptamer-based diagnostics and therapeutics specific for infectious diseases.
Collapse
Affiliation(s)
| | | | - Youli Zu
- Department of Pathology and Genomic Medicine, Houston Methodist Hospital, Houston, TX 77030, USA
| |
Collapse
|