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Lin J, Wan H, Xue H, He Y, Peng B, Zhang Z, Wang Y. Transcriptomics reveals different response mechanisms of Litopenaeus vannamei hemocytes to injection of Vibrio parahaemolyticus and WSSV. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. PART D, GENOMICS & PROTEOMICS 2024; 50:101201. [PMID: 38340389 DOI: 10.1016/j.cbd.2024.101201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2023] [Revised: 01/21/2024] [Accepted: 01/27/2024] [Indexed: 02/12/2024]
Abstract
As the most important cultural crustacean species worldwide, studies about Pacific white shrimp (Litopenaeus vannamei) have received more attention. It has been well-documented that various pathogens could infect L. vannamei, resulting in huge economic losses. The studies about the responding mechanism of L. vannamei to sole pathogens such as Vibrio parahaemolyticus and white spot virus (WSSV) have been extensively reported, while the studies about the differently responding mechanisms remain unclear. In the present study, we identified the differently expressed genes (DEGs) of L. vannamei hemocytes post V. parahaemolyticus and WSSV infection with RNA-seq technology and compared the DEGs between the two groups. The results showed 2672 DEGs post the V. parahaemolyticus challenge (1079 up-regulated and 1593 down-regulated genes), while 1146 DEGs post the WSSV challenge (1067 up-regulated and 513 down-regulated genes). In addition, we screened the genes that simultaneously respond to WSSV and V. parahaemolyticus (434), solely respond to WSSV (1146), and V. parahaemolyticus challenge (2238), respectively. Six DEGs involved in innate immunity were quantified to validate the RNA-seq results, and the results confirmed the high consistency of both methods. Furthermore, we found plenty of innate immunity-related genes that responded to V. parahaemolyticus and WSSV infection, including pattern recognition receptors (PRRs), the proPO activating system, antimicrobial peptides (AMPs), and other immunity-related proteins. The results revealed that they were differently expressed after different pathogen challenges, demonstrating the complex and specific recognition systems involved in defending against the invasion of different pathogens in the environment. The present study improved our understanding of the molecular response of hemocytes of L. vannamei to V. parahaemolyticus and WSSV stimulation.
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Affiliation(s)
- Jiaming Lin
- College of Marine Biology, Xiamen Ocean Vocational College, Xiamen 361100, China; Xiamen Key Laboratory of Intelligent Fishery, Xiamen 361100, China
| | - Haifu Wan
- Fisheries College, Jimei University, Xiamen 361021, China; Laboratory of Healthy Mariculture for the East China Sea, Ministry of Agriculture and Rural Affairs, Xiamen 361021, China
| | - Haibo Xue
- College of Marine Biology, Xiamen Ocean Vocational College, Xiamen 361100, China; Xiamen Key Laboratory of Intelligent Fishery, Xiamen 361100, China
| | - Yibin He
- College of Marine Biology, Xiamen Ocean Vocational College, Xiamen 361100, China; Xiamen Key Laboratory of Intelligent Fishery, Xiamen 361100, China
| | - Bohao Peng
- Fisheries College, Jimei University, Xiamen 361021, China; Laboratory of Healthy Mariculture for the East China Sea, Ministry of Agriculture and Rural Affairs, Xiamen 361021, China
| | - Ziping Zhang
- College of Marine Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Yilei Wang
- Fisheries College, Jimei University, Xiamen 361021, China; Laboratory of Healthy Mariculture for the East China Sea, Ministry of Agriculture and Rural Affairs, Xiamen 361021, China.
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Shi Q, Zhang Y, Ni M, Bai Y, Zhou B, Zheng J, Cui Z. Expression characteristics and inhibitory activity of a leucine-rich repeat (LRR)-only protein in the Chinese mitten crab, Eriocheir sinensis. FISH & SHELLFISH IMMUNOLOGY 2024; 145:109300. [PMID: 38104701 DOI: 10.1016/j.fsi.2023.109300] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2023] [Revised: 12/08/2023] [Accepted: 12/11/2023] [Indexed: 12/19/2023]
Abstract
The leucine-rich repeat (LRR) domain is a crucial structure in a variety of immune related proteins and displays multiple immune functions. In this study, the open reading frame (ORF) of an LRR-only protein was cloned from the Chinese mitten crab, Eriocheir sinensis (EsLRRop1). The protein sequence of EsLRRop1 contained seven LRR motifs, three LRR-TYP motifs and an LRRCT motif. Tissue distribution exhibited that EsLRRop1 mainly expressed in nervous tissues including thoracic ganglion, eyestalk and brain while showed relatively lower transcriptional level in hemocyte. Based on the above expression characteristics, the responses of EsLRRop1 to the challenge of Vibrio parahaemolyticus and Staphylococcus aureus were tested. The result showed that the transcript of EsLRRop1 in thoracic ganglion and eyestalk up-regulated after being challenged with S. aureus, while it decreased post injection with V. parahaemolyticus. The transcript of EsLRRop1 in hemocytes up-regulated sharply at 3 h and decreased at 12 h and 24 h after being challenged with V. parahaemolyticus, while it decreased at 12 h and 24 h post injection with S. aureus. The recombinant protein of EsLRRop1 (His-EsLRRop1) displayed binding activities to V. alginolyticus, V. harveyi, V. parahaemolyticus, S. aureus, Corynebacterium glutamicum and Micrococcus lysodeikticus as well as lipopolysaccharide (LPS) and peptidoglycan (PGN). Moreover, the His-EsLRRop1 exhibited inhibitory activity against V. parahaemolyticus and V. harveyi with minimum inhibitory concentration (MIC) of 3.57-7.14 μM and 7.14-14.28 μM, respectively. These results provide theoretical basis for the application of EsLRRop1 in inhibiting bacteria in aquaculture practice.
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Affiliation(s)
- Qiao Shi
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China
| | - Yi Zhang
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China
| | - Mengqi Ni
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China
| | - Yunhui Bai
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China
| | - Bin Zhou
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China
| | - Jinbin Zheng
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China
| | - Zhaoxia Cui
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China; Laboratory for Marine Biology and Biotechnology, Pilot Qingdao National Laboratory for Marine Science and Technology (Qingdao), Qingdao, 266071, China.
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