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Prati S, Grabner DS, Pfeifer SM, Lorenz AW, Sures B. Generalist parasites persist in degraded environments: a lesson learned from microsporidian diversity in amphipods. Parasitology 2022; 149:1-10. [PMID: 35485747 PMCID: PMC10090640 DOI: 10.1017/s0031182022000452] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Revised: 03/10/2022] [Accepted: 03/27/2022] [Indexed: 11/07/2022]
Abstract
The present study provides new insight into suitable microsporidian–host associations. It relates regional and continental-wide host specialization in microsporidians infecting amphipods to degraded and recovering habitats across 2 German river catchments. It provides a unique opportunity to infer the persistence of parasites following anthropogenic disturbance and their establishment in restored rivers. Amphipods were collected in 31 sampling sites with differing degradation and restoration gradients. Specimens were morphologically (hosts) and molecularly identified (host and parasites). Amphipod diversity and abundance, microsporidian diversity, host phylogenetic specificity and continental-wide β-specificity were investigated and related to each other and/or environmental variables. Fourteen microsporidian molecular operational taxonomic units (MOTUs), mainly generalist parasites, infecting 6 amphipod MOTUs were detected, expanding the current knowledge on the host range by 17 interactions. There was no difference in microsporidian diversity and host specificity among restored and near-natural streams (Boye) or between those located in urban and rural areas (Kinzig). Similarly, microsporidian diversity was generally not influenced by water parameters. In the Boye catchment, host densities did not influence microsporidian MOTU richness across restored and near-natural sites. High host turnover across the geographical range suggests that neither environmental conditions nor host diversity plays a significant role in the establishment into restored areas. Host diversity and environmental parameters do not indicate the persistence and dispersal of phylogenetic host generalist microsporidians in environments that experienced anthropogenic disturbance. Instead, these might depend on more complex mechanisms such as the production of resistant spores, host switching and host dispersal acting individually or conjointly.
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Affiliation(s)
- Sebastian Prati
- Aquatic Ecology and Centre for Water and Environmental Research, University of Duisburg-Essen, Universitaetsstr. 5, 45141 Essen, Germany
| | - Daniel S. Grabner
- Aquatic Ecology and Centre for Water and Environmental Research, University of Duisburg-Essen, Universitaetsstr. 5, 45141 Essen, Germany
| | - Svenja M. Pfeifer
- Aquatic Ecology and Centre for Water and Environmental Research, University of Duisburg-Essen, Universitaetsstr. 5, 45141 Essen, Germany
| | - Armin W. Lorenz
- Aquatic Ecology and Centre for Water and Environmental Research, University of Duisburg-Essen, Universitaetsstr. 5, 45141 Essen, Germany
| | - Bernd Sures
- Aquatic Ecology and Centre for Water and Environmental Research, University of Duisburg-Essen, Universitaetsstr. 5, 45141 Essen, Germany
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Dubuffet A, Chauvet M, Moné A, Debroas D, Lepère C. A phylogenetic framework to investigate the microsporidian communities through metabarcoding and its application to lake ecosystems. Environ Microbiol 2021; 23:4344-4359. [PMID: 34081807 DOI: 10.1111/1462-2920.15618] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Revised: 05/27/2021] [Accepted: 05/29/2021] [Indexed: 11/29/2022]
Abstract
Microsporidia are obligate intracellular eukaryotic parasites known to parasitize many species of the animal kingdom as well as some protists. However, their diversity is underestimated, in part as a consequence of the failure of 'universal' primers to detect them in metabarcoding studies. Besides, due to the inconsistency between taxonomy and phylogenetic data, available databases may assign incorrectly sequences obtained with high-throughput sequencing. In this work, we developed a comprehensive reference database which positions microsporidian SSU rRNA gene sequences within a coherent ranked phylogenetic framework. We used this phylogenetic framework to study the microsporidian diversity in lacustrine ecosystems, focusing on < 150 μm planktonic size fractions. Our analysis shows a high diversity of Microsporidia, with the identification of 1531 OTUs distributed within seven clades, of which 76% were affiliated to clade IV2 and 20% to clade I (nomenclature presented hereby). About a quarter of the obtained sequences shared less than 85% identity to the closest known species, which might represent undescribed genera or families infecting small hosts. Variations in the abundance of Microsporidia were recorded between the two lakes sampled and across the sampling period, which might be explained by spatio-temporal variations of their potential hosts such as microeukaryotes and metazooplankton.
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Affiliation(s)
- Aurore Dubuffet
- CNRS, Laboratoire Microorganismes: Génome et Environnement, Université Clermont Auvergne, Clermont-Ferrand, F-63000, France
| | - Marina Chauvet
- CNRS, Laboratoire Microorganismes: Génome et Environnement, Université Clermont Auvergne, Clermont-Ferrand, F-63000, France
| | - Anne Moné
- CNRS, Laboratoire Microorganismes: Génome et Environnement, Université Clermont Auvergne, Clermont-Ferrand, F-63000, France
| | - Didier Debroas
- CNRS, Laboratoire Microorganismes: Génome et Environnement, Université Clermont Auvergne, Clermont-Ferrand, F-63000, France
| | - Cécile Lepère
- CNRS, Laboratoire Microorganismes: Génome et Environnement, Université Clermont Auvergne, Clermont-Ferrand, F-63000, France
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Quiles A, Rigaud T, Wattier RA, Grabowski M, Bacela Spychalska K. Wide geographic distribution of overlooked parasites: Rare Microsporidia in Gammarus balcanicus, a species complex with a high rate of endemism. INTERNATIONAL JOURNAL FOR PARASITOLOGY-PARASITES AND WILDLIFE 2021; 14:121-129. [PMID: 33604238 PMCID: PMC7876520 DOI: 10.1016/j.ijppaw.2021.01.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/27/2020] [Revised: 01/10/2021] [Accepted: 01/10/2021] [Indexed: 11/24/2022]
Abstract
Parasites and other symbionts deeply influence host organisms, and no living organism can be considered to have evolved independent of its symbionts. The first step towards understanding symbiotic influences upon host organisms is a strong supporting knowledge of parasite/symbiont diversity. Parasites of freshwater amphipods are diverse, with Microsporidia being a major group. These intracellular parasites impact gammarid fitness in different ways, ranging from reduced fitness to increased fecundity. Many Microsporidia have been recorded using molecular data, with multiple taxa pending formal taxonomic description. While some parasites are common, others are known only through sporadic records of single infections. In this study, we focus on rare/sporadic microsporidian infections within Gammarus balcanicus, a host species complex with a high level of endemism. In addition to enriching our knowledge on Microsporidia parasite diversity in amphipod hosts, we test whether these symbionts are specific to G. balcanicus or if they are the same taxa infecting other gammarid species. Of 2231 hosts from 87 sites, we catalogued 29 sequences of “rare” Microsporidia clustering into 19 haplogroups. These haplogroups cluster into 11 lineages: four pre-described taxa (Cucumispora roeselum, C. ornata, C. dikerogammari and Enterocytospora artemiae) and seven ‘Molecular Operational Taxonomic Units’, which are known from previously published studies to infect other European amphipod species. Our study significantly widens the geographic range of these Microsporidia and expands the known spectrum of hosts infected. Our results suggest that these parasites are ancient infections of European gammarids. For some host-parasite systems, we hypothesize that the common parasite ancestors that infected the hosts' common ancestors, diversified alongside host diversification. For others, we observe Microsporidia taxa with wide host ranges that do not follow host phylogeny. Microsporidia infect a wide range of host but are well studied for the most abundant parasite taxa. Amphipods are common microsporidian hosts but knowledge on parasite diversity remains partial. Gammarus balcanicus species complex is a perfect host to study evolutionary history of rare Microsporidia. All Microsporidia found in G. balcanicus are ancient infections in the European gammarids. Some Microsporidia co-diversified with the host, while the others did not follow the host phylogeny.
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Affiliation(s)
- Adrien Quiles
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 Boulevard Gabriel, 21000 Dijon, France.,Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland
| | - Thierry Rigaud
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 Boulevard Gabriel, 21000 Dijon, France
| | - Rémi A Wattier
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 Boulevard Gabriel, 21000 Dijon, France
| | - Michal Grabowski
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland
| | - Karolina Bacela Spychalska
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland
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Quiles A, Wattier RA, Bacela-Spychalska K, Grabowski M, Rigaud T. Dictyocoela microsporidia diversity and co-diversification with their host, a gammarid species complex (Crustacea, Amphipoda) with an old history of divergence and high endemic diversity. BMC Evol Biol 2020; 20:149. [PMID: 33176694 PMCID: PMC7659068 DOI: 10.1186/s12862-020-01719-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Accepted: 11/04/2020] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Although the processes of co-evolution between parasites and their hosts are well known, evidence of co-speciation remains scarce. Microsporidian intracellular parasites, due to intimate relationships with their hosts and mixed mode of transmission (horizontal but also vertical, from mother to offspring), may represent an interesting biological model for investigating co-speciation. Amphipod crustaceans, especially gammarids, are regular hosts of microsporidian parasites, in particular the Dictyocoela spp., which have so far been found limited to these amphipods and are known to use a vertical mode of transmission. The amphipod genus Gammarus has a diversification history spanning the last 50-60 Mya and an extensive cryptic diversity in most of the nominal species. Here, we investigated the degree of co-diversification between Dictyocoela and Gammarus balcanicus, an amphipod with high degrees of ancient cryptic diversification and lineage endemism, by examining the genetic diversity of these parasites over the entire geographic range of the host. We hypothesised that the strong host diversification and vertical transmission of Dictyocoela would promote co-diversification. RESULTS Using the parasite SSU rDNA as a molecular marker, analyzing 2225 host specimens from 88 sites covering whole host range, we found 31 haplogroups of Dictyocoela, 30 of which were novel, belonging to four Dictyocoela species already known to infect other Gammarus spp. The relationships between Dictyocoela and gammarids is therefore ancient, with the speciation in parasites preceding those of the hosts. Each novel haplogroup was nevertheless specific to G. balcanicus, leaving the possibility for subsequent co-diversification process during host diversification. A Procrustean Approach to Co-phylogeny (PACo) analysis revealed that diversification of Dictyocoela was not random with respect to that of the host. We found high degrees of congruence between the diversification of G. balcanicus and that of Dictyocoela roeselum and D. muelleri. However, we also found some incongruences between host and Dictyocoela phylogenies, e.g. in D. duebenum, probably due to host shifts between different G. balcanicus cryptic lineages. CONCLUSION The evolutionary history of Dictyocoela and Gammarus balcanicus represents an example of an overall host-parasite co-diversification, including cases of host shifts.
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Affiliation(s)
- Adrien Quiles
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 boulevard Gabriel, 21000, Dijon, France
- Department of Invertebrate Zoology and Hydrobiology, Faculty of Biology and Environmental Protection, University of Łódź, Banacha 12/16, 90-237, Łódź, Poland
| | - Rémi A Wattier
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 boulevard Gabriel, 21000, Dijon, France
| | - Karolina Bacela-Spychalska
- Department of Invertebrate Zoology and Hydrobiology, Faculty of Biology and Environmental Protection, University of Łódź, Banacha 12/16, 90-237, Łódź, Poland
| | - Michal Grabowski
- Department of Invertebrate Zoology and Hydrobiology, Faculty of Biology and Environmental Protection, University of Łódź, Banacha 12/16, 90-237, Łódź, Poland
| | - Thierry Rigaud
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 boulevard Gabriel, 21000, Dijon, France.
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Park E, Jorge F, Poulin R. Shared geographic histories and dispersal contribute to congruent phylogenies between amphipods and their microsporidian parasites at regional and global scales. Mol Ecol 2020; 29:3330-3345. [PMID: 32706932 DOI: 10.1111/mec.15562] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Revised: 07/16/2020] [Accepted: 07/17/2020] [Indexed: 12/13/2022]
Abstract
In parasites that strongly rely on a host for dispersal, geographic barriers that act on the host will simultaneously influence parasite distribution as well. If their association persists over macroevolutionary time it may result in congruent phylogenetic and phylogeographic patterns due to shared geographic histories. Here, we investigated the level of congruent evolutionary history at a regional and global scale in a highly specialised parasite taxon infecting hosts with limited dispersal abilities: the microsporidians Dictyocoela spp. and their amphipod hosts. Dictyocoela can be transmitted both vertically and horizontally and is the most common microsporidian genus occurring in amphipods in Eurasia. However, little is known about its distribution elsewhere. We started by conducting molecular screening to detect microsporidian parasites in endemic amphipod species in New Zealand; based on phylogenetic analyses, we identified nine species-level microsporidian taxa including six belonging to Dictyocoela. With a distance-based cophylogenetic analysis at the regional scale, we identified overall congruent phylogenies between Paracalliope, the most common New Zealand freshwater amphipod taxon, and their Dictyocoela parasites. Also, hosts and parasites showed similar phylogeographic patterns suggesting shared biogeographic histories. Similarly, at a global scale, phylogenies of amphipod hosts and their Dictyocoela parasites showed broadly congruent phylogenies. The observed patterns may have resulted from covicariance and/or codispersal, suggesting that the intimate association between amphipods and Dictyocoela may have persisted over macroevolutionary time. We highlight that shared biogeographic histories could play a role in the codiversification of hosts and parasites at a macroevolutionary scale.
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Affiliation(s)
- Eunji Park
- Department of Zoology, University of Otago, Dunedin, New Zealand
| | - Fátima Jorge
- Department of Zoology, University of Otago, Dunedin, New Zealand
| | - Robert Poulin
- Department of Zoology, University of Otago, Dunedin, New Zealand
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Bojko J. The mitochondrial genome of UK (non-native) Dikerogammarus haemobaphes (Amphipoda: Gammaridae) informs upon Dikerogammarus evolution, invasions and associated microparasites. HYDROBIOLOGIA 2019; 847:229-242. [PMID: 32226107 PMCID: PMC7100570 DOI: 10.1007/s10750-019-04084-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/17/2019] [Revised: 09/24/2019] [Accepted: 09/27/2019] [Indexed: 06/10/2023]
Abstract
The amphipod Dikerogammarus haemobaphes is a high-risk carrier of parasites that impact wildlife in its non-native range. Studies using the mitochondrial genes, Cytochrome Oxidase Sub-Unit 1 (cox1) and small-subunit ribosomal RNA gene (16S), provide some nucleotide detail for understanding the evolution and phylogeography of this species. Despite this, the origins of the invasion remain unknown, as do the origins of its parasites. This study provides the full annotated mitochondrial genome (15,460 bp) of D. haemobaphes, consisting of 2 rRNAs, 24 tRNAs and 14 protein coding genes. Mitochondrial genes from the UK isolate are compared to existing data on NCBI and are used in a concatenated phylogenetic approach and identify D. haemobaphes as an early member of the Gammaridae (Amphipoda). Viral, bacterial, protistan and microsporidian parasites are present across the Gammaridae, including D. haemobaphes, suggesting the ancestor of the Gammaridae harboured related diseases, and that further screening of amphipods is likely to reveal further microparasite diversity. This correlation suggests that other gammarid invaders have the potential to harbour a range of microparasites. The mitochondrial genome of this species will act a resource to facilitate our understanding of geneflow, disease epidemiology and evolutionary history in this invasion-disease model.
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Affiliation(s)
- Jamie Bojko
- Emerging Pathogens Institute, University of Florida, Gainesville, FL 32611 USA
- Institute of Food and Agricultural Sciences, University of Florida, Gainesville, FL 32611 USA
- School of Forest Resource and Conservation, University of Florida, Gainesville, FL 32611 USA
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7
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Quiles A, Bacela-Spychalska K, Teixeira M, Lambin N, Grabowski M, Rigaud T, Wattier RA. Microsporidian infections in the species complex Gammarus roeselii (Amphipoda) over its geographical range: evidence for both host-parasite co-diversification and recent host shifts. Parasit Vectors 2019; 12:327. [PMID: 31253176 PMCID: PMC6599290 DOI: 10.1186/s13071-019-3571-z] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2019] [Accepted: 06/19/2019] [Indexed: 11/29/2022] Open
Abstract
BACKGROUND Microsporidians are obligate endoparasites infecting taxonomically diverse hosts. Both vertical (from mother to eggs) and horizontal (between conspecifics or between species) transmission routes are known. While the former may promote co-speciation and host-specificity, the latter may promote shifts between host species. Among aquatic arthropods, freshwater amphipod crustaceans are hosts for many microsporidian species. However, despite numerous studies, no general pattern emerged about host specificity and co-diversification. In south-eastern Europe, the gammarid Gammarus roeselii is composed of 13 cryptic lineages of Miocene to Pleistocene age but few genotypes of one lineage have spread postglacially throughout north-western Europe. Based on nearly 100 sampling sites covering its entire range, we aim to: (i) explore the microsporidian diversity present in G. roeselii and their phylogenetic relationships, especially in relation to the parasites infecting other Gammaridae; (ii) test if the host phylogeographical history might have impacted host-parasite association (e.g. co-diversifications or recent host shifts from local fauna). METHODS We used part of the small subunit rRNA gene as source of sequences to identify and determine the phylogenetic position of the microsporidian taxa infecting G. roeselii. RESULTS Microsporidian diversity was high in G. roeselii with 24 detected haplogroups, clustered into 18 species-level taxa. Ten microsporidian species were rare, infecting a few individual hosts in a few populations, and were mostly phylogenetically related to parasites from other amphipods or various crustaceans. Other microsporidians were represented by widespread genera with high prevalence: Nosema, Cucumispora and Dictyocoela. Two contrasting host association patterns could be observed. First, two vertically transmitted microsporidian species, Nosema granulosis and Dictyocoela roeselum, share the pattern of infecting G. roeselii over most of its range and are specific to this host suggesting the co-diversification scenario. This pattern contrasted with that of Dictyocoela muelleri, the three species of Cucumispora, and the rare parasites, present only in the recently colonised region by the host. These patterns suggest recent acquisitions from local host species, after the recent spread of G. roeselii. CONCLUSIONS Microsporidians infecting G. roeselii revealed two scenarios of host-parasite associations: (i) ancient associations with vertically transmitted parasites that probably co-diversified with their hosts, and (ii) host shifts from local host species, after the postglacial spread of G. roeselii.
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Affiliation(s)
- Adrien Quiles
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 Boulevard Gabriel, 21000 Dijon, France
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland
| | - Karolina Bacela-Spychalska
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland
| | - Maria Teixeira
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 Boulevard Gabriel, 21000 Dijon, France
| | - Nicolas Lambin
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 Boulevard Gabriel, 21000 Dijon, France
| | - Michal Grabowski
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland
| | - Thierry Rigaud
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 Boulevard Gabriel, 21000 Dijon, France
| | - Rémi André Wattier
- Université Bourgogne Franche-Comté, Laboratoire Biogéosciences, UMR CNRS 6282, 6 Boulevard Gabriel, 21000 Dijon, France
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Dimova M, Madyarova E, Gurkov A, Drozdova P, Lubyaga Y, Kondrateva E, Adelshin R, Timofeyev M. Genetic diversity of Microsporidia in the circulatory system of endemic amphipods from different locations and depths of ancient Lake Baikal. PeerJ 2018; 6:e5329. [PMID: 30083461 PMCID: PMC6076988 DOI: 10.7717/peerj.5329] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2018] [Accepted: 07/06/2018] [Indexed: 01/03/2023] Open
Abstract
Endemic amphipods (Amphipoda, Crustacea) of the most ancient and large freshwater Lake Baikal (Siberia, Russia) are a highly diverse group comprising >15% of all known species of continental amphipods. The extensive endemic biodiversity of Baikal amphipods provides the unique opportunity to study interactions and possible coevolution of this group and their parasites, such as Microsporidia. In this study, we investigated microsporidian diversity in the circulatory system of 22 endemic species of amphipods inhabiting littoral, sublittoral and deep-water zones in all three basins of Lake Baikal. Using molecular genetic techniques, we found microsporidian DNA in two littoral (Eulimnogammarus verrucosus, Eulimnogammarus cyaneus), two littoral/sublittoral (Pallasea cancellus, Eulimnogammarus marituji) and two sublittoral/deep-water (Acanthogammarus lappaceus longispinus, Acanthogammarus victorii maculosus) endemic species. Twenty sequences of the small subunit ribosomal (SSU) rDNA were obtained from the haemolymph of the six endemic amphipod species sampled from 0–60 m depths at the Southern Lake Baikal’s basin (only the Western shore) and at the Central Baikal. They form clusters with similarity to Enterocytospora, Cucumispora, Dictyocoela, and several unassigned Microsporidia sequences, respectively. Our sequence data show similarity to previously identified microsporidian DNA from inhabitants of both Lake Baikal and other water reservoirs. The results of our study suggest that the genetic diversity of Microsporidia in haemolymph of endemic amphipods from Lake Baikal does not correlate with host species, geographic location or depth factors but is homogeneously diverse.
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Affiliation(s)
| | - Ekaterina Madyarova
- Irkutsk State University, Irkutsk, Russia.,Baikal Research Centre, Irkutsk, Russia
| | - Anton Gurkov
- Irkutsk State University, Irkutsk, Russia.,Baikal Research Centre, Irkutsk, Russia
| | | | - Yulia Lubyaga
- Irkutsk State University, Irkutsk, Russia.,Baikal Research Centre, Irkutsk, Russia
| | | | - Renat Adelshin
- Irkutsk State University, Irkutsk, Russia.,Irkutsk Anti-Plague Research Institute of Siberia and Far East, Irkutsk, Russia
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9
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Bacela-Spychalska K, Wróblewski P, Mamos T, Grabowski M, Rigaud T, Wattier R, Rewicz T, Konopacka A, Ovcharenko M. Europe-wide reassessment of Dictyocoela (Microsporidia) infecting native and invasive amphipods (Crustacea): molecular versus ultrastructural traits. Sci Rep 2018; 8:8945. [PMID: 29895884 PMCID: PMC5997659 DOI: 10.1038/s41598-018-26879-3] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2018] [Accepted: 05/17/2018] [Indexed: 11/11/2022] Open
Abstract
Microsporidia are common parasites infecting animals and protists. They are specifically common pathogens of amphipods (Crustacea, Malacostraca), with Dictyocoela spp. being particularly frequent and highly prevalent, exhibiting a range of phenotypic and ecological effects. Until now, seven species of Dictyocoela were defined, predominantly based on the genetic distance. However, neither the taxonomic status of this provisionally erected genus (based on eight novel sequences and one micrograph of the spore), nor its internal phylogenetic relationships have been clearly revealed. The formal description of the genus and of most of the putative species are still lacking. Here we aimed to fill this gap and performed both ultrastructural and molecular studies (based on SSU, ITS and partial LSU) using different species delimitation methods. As a consensus of these results and following conservative data interpretation, we propose to distinguish five species infecting gammarid hosts, and to keep the names introduced by the authors of the type sequences: Dictyocoela duebenum, D. muelleri, D. berillonum and D. roeselum. We provide full descriptions of these species. Moreover, thanks to our extensive sampling, we extend the known host and geographic range of these Microsporidia.
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Affiliation(s)
- Karolina Bacela-Spychalska
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland.
| | - Piotr Wróblewski
- Witold Stefański Institute of Parasitology of the Polish Academy of Sciences, 51/55 Twarda Street, 00-818, Warsaw, Poland
| | - Tomasz Mamos
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland
| | - Michał Grabowski
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland
| | - Thierry Rigaud
- Laboratoire Biogéosciences, UMR CNRS 6282, Université de Bourgogne Franche Comté, 6 boulevard Gabriel, 21000, Dijon, France
| | - Remi Wattier
- Laboratoire Biogéosciences, UMR CNRS 6282, Université de Bourgogne Franche Comté, 6 boulevard Gabriel, 21000, Dijon, France
| | - Tomasz Rewicz
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland
| | - Alicja Konopacka
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, 12/16 Banacha Street, 90-237, Lodz, Poland
| | - Mykola Ovcharenko
- Witold Stefański Institute of Parasitology of the Polish Academy of Sciences, 51/55 Twarda Street, 00-818, Warsaw, Poland
- Institute of Biology and Environmental Protection, Pomeranian Academy High School, 22b Arciszewskiego Street, 76-200, Słupsk, Poland
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