1
|
Munbodh R, Chen Z, Jaffray DA, Moseley DJ, Knisely JPS, Duncan JS. A frequency-based approach to locate common structure for 2D-3D intensity-based registration of setup images in prostate radiotherapy. Med Phys 2016; 34:3005-17. [PMID: 17822009 PMCID: PMC2796184 DOI: 10.1118/1.2745235] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
In many radiotherapy clinics, geometric uncertainties in the delivery of 3D conformal radiation therapy and intensity modulated radiation therapy of the prostate are reduced by aligning the patient's bony anatomy in the planning 3D CT to corresponding bony anatomy in 2D portal images acquired before every treatment fraction. In this paper, we seek to determine if there is a frequency band within the portal images and the digitally reconstructed radiographs (DRRs) of the planning CT in which bony anatomy predominates over non-bony anatomy such that portal images and DRRs can be suitably filtered to achieve high registration accuracy in an automated 2D-3D single portal intensity-based registration framework. Two similarity measures, mutual information and the Pearson correlation coefficient were tested on carefully collected gold-standard data consisting of a kilovoltage cone-beam CT (CBCT) and megavoltage portal images in the anterior-posterior (AP) view of an anthropomorphic phantom acquired under clinical conditions at known poses, and on patient data. It was found that filtering the portal images and DRRs during the registration considerably improved registration performance. Without filtering, the registration did not always converge while with filtering it always converged to an accurate solution. For the pose-determination experiments conducted on the anthropomorphic phantom with the correlation coefficient, the mean (and standard deviation) of the absolute errors in recovering each of the six transformation parameters were Theta(x):0.18(0.19) degrees, Theta(y):0.04(0.04) degrees, Theta(z):0.04(0.02) degrees, t(x):0.14(0.15) mm, t(y):0.09(0.05) mm, and t(z):0.49(0.40) mm. The mutual information-based registration with filtered images also resulted in similarly small errors. For the patient data, visual inspection of the superimposed registered images showed that they were correctly aligned in all instances. The results presented in this paper suggest that robust and accurate registration can be achieved with intensity-based methods by focusing on rigid bony structures in the images while diminishing the influence of artifacts with similar frequencies as soft tissue.
Collapse
Affiliation(s)
- Reshma Munbodh
- Department of Electrical Engineering, Yale University, New Haven, Connecticut 06520, USA.
| | | | | | | | | | | |
Collapse
|
2
|
Steininger P, Neuner M, Weichenberger H, Sharp GC, Winey B, Kametriser G, Sedlmayer F, Deutschmann H. Auto-masked 2D/3D image registration and its validation with clinical cone-beam computed tomography. Phys Med Biol 2012; 57:4277-92. [PMID: 22705709 DOI: 10.1088/0031-9155/57/13/4277] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
|
3
|
Lu C, Chelikani S, Jaffray DA, Milosevic MF, Staib LH, Duncan JS. Simultaneous nonrigid registration, segmentation, and tumor detection in MRI guided cervical cancer radiation therapy. IEEE TRANSACTIONS ON MEDICAL IMAGING 2012; 31:1213-27. [PMID: 22328178 PMCID: PMC3889159 DOI: 10.1109/tmi.2012.2186976] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
External beam radiation therapy (EBRT) for the treatment of cancer enables accurate placement of radiation dose on the cancerous region. However, the deformation of soft tissue during the course of treatment, such as in cervical cancer, presents significant challenges for the delineation of the target volume and other structures of interest. Furthermore, the presence and regression of pathologies such as tumors may violate registration constraints and cause registration errors. In this paper, automatic segmentation, nonrigid registration and tumor detection in cervical magnetic resonance (MR) data are addressed simultaneously using a unified Bayesian framework. The proposed novel method can generate a tumor probability map while progressively identifying the boundary of an organ of interest based on the achieved nonrigid transformation. The method is able to handle the challenges of significant tumor regression and its effect on surrounding tissues. The new method was compared to various currently existing algorithms on a set of 36 MR data from six patients, each patient has six T2-weighted MR cervical images. The results show that the proposed approach achieves an accuracy comparable to manual segmentation and it significantly outperforms the existing registration algorithms. In addition, the tumor detection result generated by the proposed method has a high agreement with manual delineation by a qualified clinician.
Collapse
Affiliation(s)
- Chao Lu
- Department of Electrical Engineering, School of Engineering and Applied Science, Yale University, New Haven, CT 06520, USA.
| | | | | | | | | | | |
Collapse
|
4
|
Markelj P, Tomaževič D, Likar B, Pernuš F. A review of 3D/2D registration methods for image-guided interventions. Med Image Anal 2012; 16:642-61. [PMID: 20452269 DOI: 10.1016/j.media.2010.03.005] [Citation(s) in RCA: 328] [Impact Index Per Article: 27.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2009] [Revised: 02/22/2010] [Accepted: 03/30/2010] [Indexed: 02/07/2023]
|
5
|
A unified framework for joint segmentation, nonrigid registration and tumor detection: application to MR-guided radiotherapy. ACTA ACUST UNITED AC 2011; 22:525-37. [PMID: 21761683 DOI: 10.1007/978-3-642-22092-0_43] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
Abstract
Image guided external beam radiation therapy (EBRT) for the treatment of cancer enables accurate placement of radiation dose to the cancerous region. However, the deformation of soft tissue during the course of treatment, such as in cervical cancer, presents significant challenges. Furthermore, the presence of pathologies such as tumors may violate registration constraints and cause registration errors. In this paper, we present a unified MAP framework that performs automatic segmentation, nonrigid registration and tumor detection simultaneously. It can generate a tumor probability map while progressively identifing the boundary of an organ of interest based on the achieved transformation. We demonstrate the approach on a set of 30 T2-weighted MR images, and the results show that the approach performs better than similar methods which separate the registration and segmentation problems. In addition, the detection result generated by the proposed method has a high agreement with the manual delineation by a qualified clinician.
Collapse
|
6
|
Lu C, Chelikani S, Papademetris X, Knisely JP, Milosevic MF, Chen Z, Jaffray DA, Staib LH, Duncan JS. An integrated approach to segmentation and nonrigid registration for application in image-guided pelvic radiotherapy. Med Image Anal 2011; 15:772-85. [PMID: 21646038 DOI: 10.1016/j.media.2011.05.010] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2011] [Revised: 05/10/2011] [Accepted: 05/11/2011] [Indexed: 11/29/2022]
Abstract
External beam radiotherapy (EBRT) has become the preferred options for nonsurgical treatment of prostate cancer and cervix cancer. In order to deliver higher doses to cancerous regions within these pelvic structures (i.e. prostate or cervix) while maintaining or lowering the doses to surrounding non-cancerous regions, it is critical to account for setup variation, organ motion, anatomical changes due to treatment and intra-fraction motion. In previous work, manual segmentation of the soft tissues is performed and then images are registered based on the manual segmentation. In this paper, we present an integrated automatic approach to multiple organ segmentation and nonrigid constrained registration, which can achieve these two aims simultaneously. The segmentation and registration steps are both formulated using a Bayesian framework, and they constrain each other using an iterative conditional model strategy. We also propose a new strategy to assess cumulative actual dose for this novel integrated algorithm, in order to both determine whether the intended treatment is being delivered and, potentially, whether or not a plan should be adjusted for future treatment fractions. Quantitative results show that the automatic segmentation produced results that have an accuracy comparable to manual segmentation, while the registration part significantly outperforms both rigid and nonrigid registration. Clinical application and evaluation of dose delivery show the superiority of proposed method to the procedure currently used in clinical practice, i.e. manual segmentation followed by rigid registration.
Collapse
Affiliation(s)
- Chao Lu
- Department of Electrical Engineering, Yale University, New Haven, CT 06520, USA.
| | | | | | | | | | | | | | | | | |
Collapse
|
7
|
Abstract
Many current image-guided radiotherapy (IGRT) systems incorporate an in-room cone-beam CT (CBCT) with a radiotherapy linear accelerator for treatment day imaging. Segmentation of key anatomical structures (prostate and surrounding organs) in 3DCBCT images as well as registration between planning and treatment images are essential for determining many important treatment parameters. Due to the image quality of CBCT, previous work typically uses manual segmentation of the soft tissues and then registers the images based on the manual segmentation. In this paper, an integrated automatic segmentation/constrained nonrigid registration is presented, which can achieve these two aims simultaneously. This method is tested using 24 sets of real patient data. Quantitative results show that the automatic segmentation produces results that have an accuracy comparable to manual segmentation, while the registration part significantly outperforms both rigid and non-rigid registration. Clinical application also shows promising results.
Collapse
|
8
|
Zhou J, Kim S, Jabbour S, Goyal S, Haffty B, Chen T, Levinson L, Metaxas D, Yue NJ. A 3D global-to-local deformable mesh model based registration and anatomy-constrained segmentation method for image guided prostate radiotherapy. Med Phys 2010; 37:1298-308. [DOI: 10.1118/1.3298374] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
|
9
|
Greene WH, Chelikani S, Purushothaman K, Knisely JPS, Chen Z, Papademetris X, Staib LH, Duncan JS. Constrained non-rigid registration for use in image-guided adaptive radiotherapy. Med Image Anal 2009; 13:809-17. [PMID: 19682945 DOI: 10.1016/j.media.2009.07.004] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2009] [Revised: 07/07/2009] [Accepted: 07/08/2009] [Indexed: 12/16/2022]
Abstract
A constrained non-rigid registration (CNRR) algorithm for use in prostate image-guided adaptive radiotherapy is presented in a coherent mathematical framework. The registration algorithm is based on a global rigid transformation combined with a series of local injective non-rigid multi-resolution cubic B-spline Free Form Deformation (FFD) transformations. The control points of the FFD are used to non-rigidly constrain the transformation to the prostate, rectum, and bladder. As well, the control points are used to rigidly constrain the transformation to the estimated position of the pelvis, left femur, and right femur. The algorithm was tested with both 3D conformal radiotherapy (3DCRT) and intensity-modulated radiotherapy (IMRT) dose plan data sets. The 3DCRT dose plan set consisted of 10 fan-beam CT (FBCT) treatment-day images acquired from four different patients. The IMRT dose plan set consisted of 32 cone-beam CT (CBCT) treatment-day images acquired from 4 different patients. The CNRR was tested with different combinations of anatomical constraints and each test significantly outperformed both rigid and non-rigid registration at aligning constrained bones and critical organs. The CNRR results were used to adapt the dose plans to account for patient positioning errors as well as inter-day bone motion and intrinsic organ deformation. Each adapted dose plan improved performance by lowering radiation distribution to the rectum and bladder while increasing or maintaining radiation distribution to the prostate.
Collapse
Affiliation(s)
- W H Greene
- Department of Biomedical Engineering, Yale University, New Haven, CT 06520, USA.
| | | | | | | | | | | | | | | |
Collapse
|
10
|
Greene WH, Chelikani S, Papademetris X, Staib LH, Knisely JPS, Duncan J. TRACKING ORGAN OVERLAP FOR A CONSTRAINED NON-RIGID REGISTRATION ALGORITHM. PROCEEDINGS. IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING 2008; 4541207:1159. [PMID: 20126424 DOI: 10.1109/isbi.2008.4541207] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
This paper tracks organ (prostate, rectum, bladder) overlap in a constrained non-rigid registration (NRR) algorithm to register computed tomographic (CT) images used in external beam prostate radiotherapy. The local motion of the organs is described by a hierarchical multi-resolution FFD based on cubic B-splines. Registration is achieved by minimizing a cost function which is a combination of three functions representing the overlap of the critical organs, image similarity and smoothness of the transformation. The constrained NRR algorithm generated better registration results when compared to an unconstrained NRR algorithm.
Collapse
Affiliation(s)
- W H Greene
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA
| | | | | | | | | | | |
Collapse
|
11
|
Greene WH, Chelikani S, Papademetris X, Knisely JPS, Duncan J. A CONSTRAINED NON-RIGID REGISTRATION ALGORITHM FOR APPLICATION IN PROSTATE RADIOTHERAPY. PROCEEDINGS. IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING 2007; 4193392:740-743. [PMID: 20011132 DOI: 10.1109/isbi.2007.356958] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
This paper presents a novel free-form deformation registration algorithm with non-rigid constraints to capture the transformation between the planning day and treatment day CT images used for external beam radiotherapy for prostate cancer. The algorithm is constrained to the predetermined motion of a segmented organ, which is described by an injective free-form deformation (FFD) based on B-splines. The end goal is for the injective transformation to be used to update the radiotherapy plan to take into account bone and soft tissue deformation. The results of the algorithm have been compared to those achieved using rigid and fully non-rigid registration. The results clearly indicate that the constrained non-rigid registration algorithm presented in this paper performed much better at capturing the motion of the constrained organ, the bladder in this case, than the rigid or fully non-rigid registration algorithms.
Collapse
Affiliation(s)
- W H Greene
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA
| | | | | | | | | |
Collapse
|