1
|
Hakimi N, Shahbakhti M, Horschig JM, Alderliesten T, Van Bel F, Colier WNJM, Dudink J. Respiratory Rate Extraction from Neonatal Near-Infrared Spectroscopy Signals. SENSORS (BASEL, SWITZERLAND) 2023; 23:s23094487. [PMID: 37177691 PMCID: PMC10181728 DOI: 10.3390/s23094487] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Revised: 05/02/2023] [Accepted: 05/03/2023] [Indexed: 05/15/2023]
Abstract
Background: Near-infrared spectroscopy (NIRS) relative concentration signals contain 'noise' from physiological processes such as respiration and heart rate. Simultaneous assessment of NIRS and respiratory rate (RR) using a single sensor would facilitate a perfectly time-synced assessment of (cerebral) physiology. Our aim was to extract respiratory rate from cerebral NIRS intensity signals in neonates admitted to a neonatal intensive care unit (NICU). Methods: A novel algorithm, NRR (NIRS RR), is developed for extracting RR from NIRS signals recorded from critically ill neonates. In total, 19 measurements were recorded from ten neonates admitted to the NICU with a gestational age and birth weight of 38 ± 5 weeks and 3092 ± 990 g, respectively. We synchronously recorded NIRS and reference RR signals sampled at 100 Hz and 0.5 Hz, respectively. The performance of the NRR algorithm is assessed in terms of the agreement and linear correlation between the reference and extracted RRs, and it is compared statistically with that of two existing methods. Results: The NRR algorithm showed a mean error of 1.1 breaths per minute (BPM), a root mean square error of 3.8 BPM, and Bland-Altman limits of agreement of 6.7 BPM averaged over all measurements. In addition, a linear correlation of 84.5% (p < 0.01) was achieved between the reference and extracted RRs. The statistical analyses confirmed the significant (p < 0.05) outperformance of the NRR algorithm with respect to the existing methods. Conclusions: We showed the possibility of extracting RR from neonatal NIRS in an intensive care environment, which showed high correspondence with the reference RR recorded. Adding the NRR algorithm to a NIRS system provides the opportunity to record synchronously different physiological sources of information about cerebral perfusion and respiration by a single monitoring system. This allows for a concurrent integrated analysis of the impact of breathing (including apnea) on cerebral hemodynamics.
Collapse
Affiliation(s)
- Naser Hakimi
- Artinis Medical Systems, B.V., Einsteinweg 17, 6662 PW Elst, The Netherlands
- Department of Neonatology, Wilhelmina Children's Hospital, University Medical Center Utrecht, Lundlaan 6, 3584 EA Utrecht, The Netherlands
| | - Mohammad Shahbakhti
- Artinis Medical Systems, B.V., Einsteinweg 17, 6662 PW Elst, The Netherlands
| | - Jörn M Horschig
- Artinis Medical Systems, B.V., Einsteinweg 17, 6662 PW Elst, The Netherlands
| | - Thomas Alderliesten
- Department of Neonatology, Wilhelmina Children's Hospital, University Medical Center Utrecht, Lundlaan 6, 3584 EA Utrecht, The Netherlands
| | - Frank Van Bel
- Department of Neonatology, Wilhelmina Children's Hospital, University Medical Center Utrecht, Lundlaan 6, 3584 EA Utrecht, The Netherlands
| | - Willy N J M Colier
- Artinis Medical Systems, B.V., Einsteinweg 17, 6662 PW Elst, The Netherlands
| | - Jeroen Dudink
- Department of Neonatology, Wilhelmina Children's Hospital, University Medical Center Utrecht, Lundlaan 6, 3584 EA Utrecht, The Netherlands
| |
Collapse
|
2
|
Ebrahimzadeh E, Saharkhiz S, Rajabion L, Oskouei HB, Seraji M, Fayaz F, Saliminia S, Sadjadi SM, Soltanian-Zadeh H. Simultaneous electroencephalography-functional magnetic resonance imaging for assessment of human brain function. Front Syst Neurosci 2022; 16:934266. [PMID: 35966000 PMCID: PMC9371554 DOI: 10.3389/fnsys.2022.934266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Accepted: 07/08/2022] [Indexed: 02/01/2023] Open
Abstract
Electroencephalography (EEG) and functional Magnetic Resonance Imaging (MRI) have long been used as tools to examine brain activity. Since both methods are very sensitive to changes of synaptic activity, simultaneous recording of EEG and fMRI can provide both high temporal and spatial resolution. Therefore, the two modalities are now integrated into a hybrid tool, EEG-fMRI, which encapsulates the useful properties of the two. Among other benefits, EEG-fMRI can contribute to a better understanding of brain connectivity and networks. This review lays its focus on the methodologies applied in performing EEG-fMRI studies, namely techniques used for the recording of EEG inside the scanner, artifact removal, and statistical analysis of the fMRI signal. We will investigate simultaneous resting-state and task-based EEG-fMRI studies and discuss their clinical and technological perspectives. Moreover, it is established that the brain regions affected by a task-based neural activity might not be limited to the regions in which they have been initiated. Advanced methods can help reveal the regions responsible for or affected by a developed neural network. Therefore, we have also looked into studies related to characterization of structure and dynamics of brain networks. The reviewed literature suggests that EEG-fMRI can provide valuable complementary information about brain neural networks and functions.
Collapse
Affiliation(s)
- Elias Ebrahimzadeh
- School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, Iran
- School of Cognitive Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran
- *Correspondence: Elias Ebrahimzadeh, ,
| | - Saber Saharkhiz
- Department of Pharmacology-Physiology, Faculty of Medicine, University of Sherbrooke, Sherbrooke, Canada
| | - Lila Rajabion
- School of Graduate Studies, State University of New York Empire State College, Manhattan, NY, United States
| | | | - Masoud Seraji
- Department of Psychology, University of Texas at Austin, Austin, TX, United States
| | - Farahnaz Fayaz
- Department of Biomedical Engineering, School of Electrical Engineering, Payame Noor University of North Tehran, Tehran, Iran
| | - Sarah Saliminia
- Department of Biomedical Engineering, School of Electrical Engineering, Payame Noor University of North Tehran, Tehran, Iran
| | - Seyyed Mostafa Sadjadi
- School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, Iran
| | - Hamid Soltanian-Zadeh
- School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, Iran
- School of Cognitive Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran
| |
Collapse
|
3
|
Ebrahimzadeh E, Shams M, Seraji M, Sadjadi SM, Rajabion L, Soltanian-Zadeh H. Localizing Epileptic Foci Using Simultaneous EEG-fMRI Recording: Template Component Cross-Correlation. Front Neurol 2021; 12:695997. [PMID: 34867704 PMCID: PMC8634837 DOI: 10.3389/fneur.2021.695997] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Accepted: 09/29/2021] [Indexed: 02/01/2023] Open
Abstract
Conventional EEG-fMRI methods have been proven to be of limited use in the sense that they cannot reveal the information existing in between the spikes. To resolve this issue, the current study obtains the epileptic components time series detected on EEG and uses them to fit the Generalized Linear Model (GLM), as a substitution for classical regressors. This approach allows for a more precise localization, and equally importantly, the prediction of the future behavior of the epileptic generators. The proposed method approaches the localization process in the component domain, rather than the electrode domain (EEG), and localizes the generators through investigating the spatial correlation between the candidate components and the spike template, as well as the medical records of the patient. To evaluate the contribution of EEG-fMRI and concordance between fMRI and EEG, this method was applied on the data of 30 patients with refractory epilepsy. The results demonstrated the significant numbers of 29 and 24 for concordance and contribution, respectively, which mark improvement as compared to the existing literature. This study also shows that while conventional methods often fail to properly localize the epileptogenic zones in deep brain structures, the proposed method can be of particular use. For further evaluation, the concordance level between IED-related BOLD clusters and Seizure Onset Zone (SOZ) has been quantitatively investigated by measuring the distance between IED/SOZ locations and the BOLD clusters in all patients. The results showed the superiority of the proposed method in delineating the spike-generating network compared to conventional EEG-fMRI approaches. In all, the proposed method goes beyond the conventional methods by breaking the dependency on spikes and using the outside-the-scanner spike templates and the selected components, achieving an accuracy of 97%. Doing so, this method contributes to improving the yield of EEG-fMRI and creates a more realistic perception of the neural behavior of epileptic generators which is almost without precedent in the literature.
Collapse
Affiliation(s)
- Elias Ebrahimzadeh
- CIPCE, School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, Iran.,School of Cognitive Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran
| | - Mohammad Shams
- Neural Engineering Laboratory, Department of Electrical and Computer Engineering, George Mason University, Fairfax, VA, United States
| | - Masoud Seraji
- Center for Molecular and Behavioral Neuroscience, Rutgers University, Newark, NJ, United States.,Behavioral and Neural Sciences Graduate Program, Rutgers University, Newark, NJ, United States
| | - Seyyed Mostafa Sadjadi
- CIPCE, School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, Iran
| | - Lila Rajabion
- School of Graduate Studies, SUNY Empire State College, Manhattan, NY, United States
| | - Hamid Soltanian-Zadeh
- CIPCE, School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, Iran.,School of Cognitive Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,Image Analysis Laboratory, Departments of Radiology and Research Administration, Henry Ford Health System, Detroit, MI, United States
| |
Collapse
|
4
|
Ebrahimzadeh E, Asgarinejad M, Saliminia S, Ashoori S, Seraji M. PREDICTING CLINICAL RESPONSE TO TRANSCRANIAL MAGNETIC STIMULATION IN MAJOR DEPRESSION USING TIME-FREQUENCY EEG SIGNAL PROCESSING. BIOMEDICAL ENGINEERING: APPLICATIONS, BASIS AND COMMUNICATIONS 2021. [DOI: 10.4015/s1016237221500484] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Repetitive transcranial magnetic stimulation (rTMS) is defined as a noninvasive technique of brain stimulation conducted for both diagnostic and therapeutic purposes. rTMS can effectively excite the brain neurons and increase brain plasticity, which becomes particularly useful in psychiatric and neurological fields. Biomarkers that predict clinical outcomes in depression are essential for increasing the precision of treatments and clinical outcomes. The electroencephalogram (EEG) is a noninvasive neurophysiological test that is promising as a biomarker sensitive to treatment effects. The aim of our study was to investigate a novel nonlinear index of the resting state EEG activity as a predictor of clinical outcome and compare its predictive capacity to traditional frequency-based indices. EEG was recorded from 50 patients with treatment resistant depression (TRD) and 24 healthy comparison (HC) subjects. TRD patients were treated with excitatory rTMS to the dorsolateral prefrontal cortex (DLPFC) for 4–6 weeks. EEG signals were first decomposed using the ICA algorithm and the extracted components were then processed by time-frequency analysis. We then go on to compare the participants’ depression severity before, after, and 2 months after finishing the last treatment session using the proposed rTMS therapy. Absolute powers (APs), band powers (BPs), and theta and beta band entropies (BAs), which were extracted from the EEG, are used as features for the classification of changes in patients and normal cases after applying rTMS. Accordingly, we can go beyond the Beck score and clinically classify the EEG signal into two classes: depression and normal. The results demonstrated 78.37%, 74.32%, and 82.43% accuracy for artificial neural network (ANN), [Formula: see text]-nearest neighbor (KNN), and support vector machine (SVM) classifiers, respectively, indicating the superiority of the proposed method to those mentioned in similar studies. Also, the electrophysiological changes are shown to be evident in patients with major depression. Our data show that the time-frequency index yields superior outcome prediction performance compared to the traditional frequency band indices. Our findings warrant further investigation of EEG-based biomarkers in depression.
Collapse
Affiliation(s)
- Elias Ebrahimzadeh
- CIPCE, School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, Iran
- School of Cognitive Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran
| | | | - Sarah Saliminia
- Biomedical Engineering Department, School of Electrical Engineering, Payame Noor University of North Tehran, Tehran, Iran
| | - Sarvenaz Ashoori
- Biomedical Engineering Department, School of Electrical Engineering, Payame Noor University of North Tehran, Tehran, Iran
| | - Masoud Seraji
- Center for Molecular and Behavioral Neuroscience, Rutgers, The State University of New Jersey, Newark, NJ, USA
| |
Collapse
|
5
|
Costa FG, Hakimi N, Van Bel F. Neuroprotection of the Perinatal Brain by Early Information of Cerebral Oxygenation and Perfusion Patterns. Int J Mol Sci 2021; 22:ijms22105389. [PMID: 34065460 PMCID: PMC8160954 DOI: 10.3390/ijms22105389] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Revised: 05/07/2021] [Accepted: 05/17/2021] [Indexed: 02/01/2023] Open
Abstract
Abnormal patterns of cerebral perfusion/oxygenation are associated with neuronal damage. In preterm neonates, hypoxemia, hypo-/hypercapnia and lack of cerebral autoregulation are related to peri-intraventricular hemorrhages and white matter injury. Reperfusion damage after perinatal hypoxic ischemia in term neonates seems related with cerebral hyperoxygenation. Since biological tissue is transparent for near infrared (NIR) light, NIR-spectroscopy (NIRS) is a noninvasive bedside tool to monitor brain oxygenation and perfusion. This review focuses on early assessment and guiding abnormal cerebral oxygenation/perfusion patterns to possibly reduce brain injury. In term infants, early patterns of brain oxygenation helps to decide whether or not therapy (hypothermia) and add-on therapies should be considered. Further NIRS-related technical advances such as the use of (functional) NIRS allowing simultaneous estimation and integrating of heart rate, respiration rate and monitoring cerebral autoregulation will be discussed.
Collapse
Affiliation(s)
- Filipe Gonçalves Costa
- Department of Neonatology, University Medical Center Utrecht, 3584 EA Utrecht, The Netherlands; (F.G.C.); (N.H.)
| | - Naser Hakimi
- Department of Neonatology, University Medical Center Utrecht, 3584 EA Utrecht, The Netherlands; (F.G.C.); (N.H.)
- Artinis Medical Systems, B.V., 6662 PW Elst, The Netherlands
| | - Frank Van Bel
- Department of Neonatology, University Medical Center Utrecht, 3584 EA Utrecht, The Netherlands; (F.G.C.); (N.H.)
- Correspondence: ; Tel.: +31-887-554-545
| |
Collapse
|
6
|
Localizing confined epileptic foci in patients with an unclear focus or presumed multifocality using a component-based EEG-fMRI method. Cogn Neurodyn 2020; 15:207-222. [PMID: 33854640 DOI: 10.1007/s11571-020-09614-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Revised: 06/07/2020] [Accepted: 06/23/2020] [Indexed: 02/07/2023] Open
Abstract
Precise localization of epileptic foci is an unavoidable prerequisite in epilepsy surgery. Simultaneous EEG-fMRI recording has recently created new horizons to locate foci in patients with epilepsy and, in comparison with single-modality methods, has yielded more promising results although it is still subject to limitations such as lack of access to information between interictal events. This study assesses its potential added value in the presurgical evaluation of patients with complex source localization. Adult candidates considered ineligible for surgery on account of an unclear focus and/or presumed multifocality on the basis of EEG underwent EEG-fMRI. Adopting a component-based approach, this study attempts to identify the neural behavior of the epileptic generators and detect the components-of-interest which will later be used as input in the GLM model, substituting the classical linear regressor. Twenty-eight sets interictal epileptiform discharges (IED) from nine patients were analyzed. In eight patients, at least one BOLD response was significant, positive and topographically related to the IEDs. These patients were rejected for surgery because of an unclear focus in four, presumed multifocality in three, and a combination of the two conditions in two. Component-based EEG-fMRI improved localization in five out of six patients with unclear foci. In patients with presumed multifocality, component-based EEG-fMRI advocated one of the foci in five patients and confirmed multifocality in one of the patients. In seven patients, component-based EEG-fMRI opened new prospects for surgery and in two of these patients, intracranial EEG supported the EEG-fMRI results. In these complex cases, component-based EEG-fMRI either improved source localization or corroborated a negative decision regarding surgical candidacy. As supported by the statistical findings, the developed EEG-fMRI method leads to a more realistic estimation of localization compared to the conventional EEG-fMRI approach, making it a tool of high value in pre-surgical evaluation of patients with refractory epilepsy. To ensure proper implementation, we have included guidelines for the application of component-based EEG-fMRI in clinical practice.
Collapse
|
7
|
Serhani MA, T. El Kassabi H, Ismail H, Nujum Navaz A. ECG Monitoring Systems: Review, Architecture, Processes, and Key Challenges. SENSORS (BASEL, SWITZERLAND) 2020; 20:E1796. [PMID: 32213969 PMCID: PMC7147367 DOI: 10.3390/s20061796] [Citation(s) in RCA: 63] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/29/2020] [Revised: 03/17/2020] [Accepted: 03/19/2020] [Indexed: 02/01/2023]
Abstract
Health monitoring and its related technologies is an attractive research area. The electrocardiogram (ECG) has always been a popular measurement scheme to assess and diagnose cardiovascular diseases (CVDs). The number of ECG monitoring systems in the literature is expanding exponentially. Hence, it is very hard for researchers and healthcare experts to choose, compare, and evaluate systems that serve their needs and fulfill the monitoring requirements. This accentuates the need for a verified reference guiding the design, classification, and analysis of ECG monitoring systems, serving both researchers and professionals in the field. In this paper, we propose a comprehensive, expert-verified taxonomy of ECG monitoring systems and conduct an extensive, systematic review of the literature. This provides evidence-based support for critically understanding ECG monitoring systems' components, contexts, features, and challenges. Hence, a generic architectural model for ECG monitoring systems is proposed, an extensive analysis of ECG monitoring systems' value chain is conducted, and a thorough review of the relevant literature, classified against the experts' taxonomy, is presented, highlighting challenges and current trends. Finally, we identify key challenges and emphasize the importance of smart monitoring systems that leverage new technologies, including deep learning, artificial intelligence (AI), Big Data and Internet of Things (IoT), to provide efficient, cost-aware, and fully connected monitoring systems.
Collapse
Affiliation(s)
- Mohamed Adel Serhani
- Department of Information Systems and Security, College of Information Technology, UAE University, Al Ain 15551, United Arab Emirates;
| | - Hadeel T. El Kassabi
- Department of Computer Science and Software Engineering, College of Information Technology, UAE University, Al Ain 15551, United Arab Emirates; (H.T.E.K.)
| | - Heba Ismail
- Department of Computer Science and Software Engineering, College of Information Technology, UAE University, Al Ain 15551, United Arab Emirates; (H.T.E.K.)
| | - Alramzana Nujum Navaz
- Department of Information Systems and Security, College of Information Technology, UAE University, Al Ain 15551, United Arab Emirates;
| |
Collapse
|