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Avasthi I, Muthukumaran R, Prajapati RK, Sankararamakrishnan R, Verma S. Crystal Engineering and Self-Assembled Nanoring Formation with Purine-Cd II /Hg II Supramolecular Frameworks. Chem Asian J 2024:e202301119. [PMID: 38286758 DOI: 10.1002/asia.202301119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Revised: 01/23/2024] [Accepted: 01/29/2024] [Indexed: 01/31/2024]
Abstract
We report three complexes of CdII and HgII with two purine rare tautomers, N9-(pyridin-2-ylmethyl)-N6 -methoxyadenine, L1 and N7-(pyridin-2-ylmethyl)-N6 -methoxyadenine, L2, highlighting diverse crystallographic signatures exhibited by them. Influence of substituents, binding sites, steric effects and metal salts on the different modes of binding enabled an insight into metal-nucleobase interactions. L1 interacted with two and three equivalents of Cd(NO3 )2 .4H2 O and HgCl2 , respectively, while L2 interacted with two equivalents of HgCl2 , altogether leading to three different complexes (1 [C48 H48 Cd6 N34 O50 ], 2 [C12 H12 Cl4 Hg2 N6 O] and 3 [C12 H12 Cl2 HgN6 O]) possessing varied dimensionality and stabilising interactions. The photoluminescent properties of these coordination frameworks have also been probed. Notably, nanoring-like structures were obtained, as a result of self-assembly of 3 when investigated by transmission electron microscopy, additionally supported by molecular dynamics simulations.
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Affiliation(s)
- Ilesha Avasthi
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, UP (208016), India
| | - R Muthukumaran
- Department of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, UP (208016), India
| | - Rajneesh K Prajapati
- Centre for Nanoscience and Advanced Imaging Centre, Indian Institute of Technology Kanpur, Kanpur, UP (208016), India
| | - Ramasubbu Sankararamakrishnan
- Department of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, UP (208016), India
| | - Sandeep Verma
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, UP (208016), India
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2
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Hao T, Li HZ, Wang F, Zhang J. Tetrahedral Imidazolate Frameworks with Auxiliary Ligands (TIF-Ax): Synthetic Strategies and Applications. Molecules 2023; 28:6031. [PMID: 37630285 PMCID: PMC10460009 DOI: 10.3390/molecules28166031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 08/10/2023] [Accepted: 08/10/2023] [Indexed: 08/27/2023] Open
Abstract
Zeolitic imidazolate frameworks (ZIFs) are an important subclass of metal-organic frameworks (MOFs). Recently, we reported a new kind of MOF, namely tetrahedral imidazolate frameworks with auxiliary ligands (TIF-Ax), by adding linear ligands (Hint) into the zinc-imidazolate system. Introducing linear ligands into the M2+-imidazolate system overcomes the limitation of imidazole derivatives. Thanks to the synergistic effect of two different types of ligands, a series of new TIF-Ax with interesting topologies and a special pore environment has been reported, and they have attracted extensive attention in gas adsorption, separation, catalysis, heavy metal ion capture, and so on. In this review, we give a comprehensive overview of TIF-Ax, including their synthesis methods, structural diversity, and multi-field applications. Finally, we also discuss the challenges and perspectives of the rational design and syntheses of new TIF-Ax from the aspects of their composition, solvent, and template. This review provides deep insight into TIF-Ax and a reference for scholars with backgrounds of porous materials, gas separation, and catalysis.
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Affiliation(s)
- Tong Hao
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, China
- College of Chemistry, Fuzhou University, Fuzhou 350108, China
- Fujian College, University of Chinese Academy of Sciences, Fuzhou 350025, China
| | - Hui-Zi Li
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, China
| | - Fei Wang
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, China
| | - Jian Zhang
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, China
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3
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Gupta RK, Riaz M, Ashafaq M, Gao ZY, Varma RS, Li DC, Cui P, Tung CH, Sun D. Adenine-incorporated metal–organic frameworks. Coord Chem Rev 2022. [DOI: 10.1016/j.ccr.2022.214558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Hurlock MJ, Lare MF, Zhang Q. Two Cd-Based Luminescent Coordination Polymers Constructed from a Truncated Linker. Inorg Chem 2021; 60:2503-2513. [PMID: 33539709 DOI: 10.1021/acs.inorgchem.0c03422] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Two cadmium coordination polymers, WSU-30 and WSU-31, were synthesized through solvothermal methods by using the low-symmetry TPE-based linker m-H4ETTC. The m-H4ETTC linker and both coordination polymers were fully characterized by using single-crystal X-ray diffraction, infrared spectroscopy, and photoluminescent emission spectroscopy. Structural analysis of WSU-30 and WSU-31 showed that each compound contains previously unknown tetranuclear cadmium(II) secondary building units. The topological analysis revealed that the 4,8-connected net of WSU-30 contains the underlying topology, alb-4,8-P21/c-1, while the mixed linker WSU-31 possesses a 3,10-connected net known as 3,10T31 topology. If the m-ETTC linker is considered as two 3-connected nodes, WSU-30 possesses a very rare 3,3,8-connected 3,3,8T25 topology, and WSU-31 possesses a previously unknown 3,12-connected net, named 3,12T61.
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Çiftçi E, Erer H, Arıcı M, Yeşilel OZ. Cobalt(II), Zinc(II) and Cadmium(II) Coordination Polymers Assembled by Flexible 5,5′-(But-2-ene-1,4-diylbis(oxy))diisophthalic Acid and 1,2-Bis((1H-imidazol-1-yl)methyl)benzene Ligands. J Inorg Organomet Polym Mater 2021. [DOI: 10.1007/s10904-020-01860-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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6
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Cai H, Huang YL, Li D. Biological metal–organic frameworks: Structures, host–guest chemistry and bio-applications. Coord Chem Rev 2019. [DOI: 10.1016/j.ccr.2017.12.003] [Citation(s) in RCA: 210] [Impact Index Per Article: 35.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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7
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Wei F, Ye Y, Huang W, Lin Q, Li Z, Liu L, Chen S, Zhang Z, Xiang S. A naphthalene diimide-based MOF with mog net featuring photochromic behaviors and high stability. INORG CHEM COMMUN 2018. [DOI: 10.1016/j.inoche.2018.05.011] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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8
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Gładysiak A, Nguyen TN, Anderson SL, Boyd PG, Palgrave RG, Bacsa J, Smit B, Rosseinsky MJ, Stylianou KC. Shedding Light on the Protonation States and Location of Protonated N Atoms of Adenine in Metal-Organic Frameworks. Inorg Chem 2018; 57:1888-1900. [PMID: 29389124 PMCID: PMC6194650 DOI: 10.1021/acs.inorgchem.7b02761] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
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We report the syntheses
and structures of five metal–organic frameworks (MOFs) based
on transition metals (NiII, CuII, and ZnII), adenine, and di-, tri-, and tetra-carboxylate ligands.
Adenine, with multiple N donor sites, was found to coordinate to the
metal centers in different binding modes including bidentate (through
N7 and N9, or N3 and N9) and tridentate (through N3, N7, and N9).
Systematic investigations of the protonation states of adenine in
each MOF structure via X-ray photoelectron spectroscopy revealed that
adenine can be selectively protonated through N1, N3, or N7. The positions
of H atoms connected to the N atoms were found from the electron density
maps, and further supported by the study of C–N–C bond
angles compared to the literature reports. DFT calculations were performed
to geometrically optimize and energetically assess the structures
simulated with different protonation modes. The present study highlights
the rich coordination chemistry of adenine and provides a method for
the determination of its protonation states and the location of protonated
N atoms of adenine within MOFs, a task that would be challenging in
complicated adenine-based MOF structures. The protonation states and positions of hydrogen atoms in five adenine-based
metal−organic frameworks were revealed using geometrical studies
based on single-crystal XRD data supported by XPS spectra and DFT
calculations.
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Affiliation(s)
- Andrzej Gładysiak
- Laboratory of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie Chimiques (ISIC), École Polytechnique Fédérale de Lausanne (EPFL Valais Wallis) , Rue de l'Industrie 17, CH-1951 Sion, Switzerland
| | - Tu N Nguyen
- Laboratory of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie Chimiques (ISIC), École Polytechnique Fédérale de Lausanne (EPFL Valais Wallis) , Rue de l'Industrie 17, CH-1951 Sion, Switzerland
| | - Samantha L Anderson
- Laboratory of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie Chimiques (ISIC), École Polytechnique Fédérale de Lausanne (EPFL Valais Wallis) , Rue de l'Industrie 17, CH-1951 Sion, Switzerland
| | - Peter G Boyd
- Laboratory of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie Chimiques (ISIC), École Polytechnique Fédérale de Lausanne (EPFL Valais Wallis) , Rue de l'Industrie 17, CH-1951 Sion, Switzerland
| | - Robert G Palgrave
- University College London , Department of Chemistry, 20 Gordon St., London WC1H 0AJ, U.K
| | - John Bacsa
- Department of Chemistry, Emory University , Atlanta, Georgia 30322, United States
| | - Berend Smit
- Laboratory of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie Chimiques (ISIC), École Polytechnique Fédérale de Lausanne (EPFL Valais Wallis) , Rue de l'Industrie 17, CH-1951 Sion, Switzerland
| | - Matthew J Rosseinsky
- Department of Chemistry, University of Liverpool , Crown Street, Liverpool, L69 7ZD, U.K
| | - Kyriakos C Stylianou
- Laboratory of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie Chimiques (ISIC), École Polytechnique Fédérale de Lausanne (EPFL Valais Wallis) , Rue de l'Industrie 17, CH-1951 Sion, Switzerland
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10
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Jonckheere D, Coutino-Gonzalez E, Baekelant W, Bueken B, Reinsch H, Stassen I, Fenwick O, Richard F, Samorì P, Ameloot R, Hofkens J, Roeffaers MBJ, De Vos DE. Silver-induced reconstruction of an adeninate-based metal-organic framework for encapsulation of luminescent adenine-stabilized silver clusters. JOURNAL OF MATERIALS CHEMISTRY. C 2016; 4:4259-4268. [PMID: 28496980 PMCID: PMC5361144 DOI: 10.1039/c6tc00260a] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2016] [Accepted: 03/29/2016] [Indexed: 05/19/2023]
Abstract
Bright luminescent silver-adenine species were successfully stabilized in the pores of the MOF-69A (zinc biphenyldicarboxylate) metal-organic framework, starting from the intrinsically blue luminescent bio-MOF-1 (zinc adeninate 4,4'-biphenyldicarboxylate). Bio-MOF-1 is transformed to the MOF-69A framework by selectively leaching structural adenine linkers from the original framework using silver nitrate solutions in aqueous ethanol. Simultaneously, bright blue-green luminescent silver-adenine clusters are formed inside the pores of the recrystallized MOF-69A matrix in high local concentrations. The structural transition and concurrent changes in optical properties were characterized using a range of structural, physicochemical and spectroscopic techniques (steady-state and time-resolved luminescence, quantum yield determination, fluorescence microscopy). The presented results open new avenues for exploring the use of MOFs containing luminescent silver clusters for solid-state lighting and sensor applications.
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Affiliation(s)
- Dries Jonckheere
- KU Leuven , Leuven Chem&Tech: Centre for Surface Chemistry and Catalysis (COK) , Celestijnenlaan 200F post box 2461 , 3001 Leuven , Belgium . ;
| | - Eduardo Coutino-Gonzalez
- KU Leuven , Leuven Chem&Tech: Molecular Imaging and Photonics (MIP) , Celestijnenlaan 200F post box 2404 , 3001 Leuven , Belgium
| | - Wouter Baekelant
- KU Leuven , Leuven Chem&Tech: Molecular Imaging and Photonics (MIP) , Celestijnenlaan 200F post box 2404 , 3001 Leuven , Belgium
| | - Bart Bueken
- KU Leuven , Leuven Chem&Tech: Centre for Surface Chemistry and Catalysis (COK) , Celestijnenlaan 200F post box 2461 , 3001 Leuven , Belgium . ;
| | - Helge Reinsch
- KU Leuven , Leuven Chem&Tech: Centre for Surface Chemistry and Catalysis (COK) , Celestijnenlaan 200F post box 2461 , 3001 Leuven , Belgium . ;
| | - Ivo Stassen
- KU Leuven , Leuven Chem&Tech: Centre for Surface Chemistry and Catalysis (COK) , Celestijnenlaan 200F post box 2461 , 3001 Leuven , Belgium . ;
| | - Oliver Fenwick
- ISIS & icFRC , Université de Strasbourg & CNRS , 8 allée Gaspard Monge , 67000 Strasbourg , France
| | - Fanny Richard
- ISIS & icFRC , Université de Strasbourg & CNRS , 8 allée Gaspard Monge , 67000 Strasbourg , France
| | - Paolo Samorì
- ISIS & icFRC , Université de Strasbourg & CNRS , 8 allée Gaspard Monge , 67000 Strasbourg , France
| | - Rob Ameloot
- KU Leuven , Leuven Chem&Tech: Centre for Surface Chemistry and Catalysis (COK) , Celestijnenlaan 200F post box 2461 , 3001 Leuven , Belgium . ;
| | - Johan Hofkens
- KU Leuven , Leuven Chem&Tech: Molecular Imaging and Photonics (MIP) , Celestijnenlaan 200F post box 2404 , 3001 Leuven , Belgium
| | - Maarten B J Roeffaers
- KU Leuven , Leuven Chem&Tech: Centre for Surface Chemistry and Catalysis (COK) , Celestijnenlaan 200F post box 2461 , 3001 Leuven , Belgium . ;
| | - Dirk E De Vos
- KU Leuven , Leuven Chem&Tech: Centre for Surface Chemistry and Catalysis (COK) , Celestijnenlaan 200F post box 2461 , 3001 Leuven , Belgium . ;
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11
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Han J, Liu X, Yu Z, He X, Xu NX. Solvent-regulated assemblies and guest-adsorption properties of Ag(I) coordination polymers with p-phenylenediacetonitrile. Inorganica Chim Acta 2016. [DOI: 10.1016/j.ica.2015.11.027] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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12
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Two 3D Supramolecular Cadmium(II) Coordination Polymers Derived from Semi-rigid Bis(2-methylbenzimidazole) and Different Dicarboxylate Ligands. J Inorg Organomet Polym Mater 2014. [DOI: 10.1007/s10904-014-0157-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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13
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Coordination polymers with nucleobases: From structural aspects to potential applications. Coord Chem Rev 2014. [DOI: 10.1016/j.ccr.2014.05.017] [Citation(s) in RCA: 96] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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14
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Khanna S, Verma S. Crystal engineering with a purine rare tautomer: structures and luminescence properties. CrystEngComm 2014. [DOI: 10.1039/c4ce00611a] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Cadmium interacts with purine nucleobases through N7 imino nitrogen and alters their amino–imino tautomeric equilibrium. Herein, we report unique crystallographic signatures and luminescence properties of cadmium complexes of N9-benzyl-N6-methoxyadenine exhibiting a variety of coordination numbers and spatial geometries.
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Affiliation(s)
- Shruti Khanna
- Department of Chemistry
- Indian Institute of Technology Kanpur
- Kanpur 208016, India
| | - Sandeep Verma
- Department of Chemistry
- Indian Institute of Technology Kanpur
- Kanpur 208016, India
- Centre for Environmental Sciences and Engineering
- Indian Institute of Technology Kanpur
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Song Y, Yin X, Tu B, Pang Q, Li H, Ren X, Wang B, Li Q. Metal–organic frameworks constructed from mixed infinite inorganic units and adenine. CrystEngComm 2014. [DOI: 10.1039/c3ce42556h] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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16
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Kang Y, Wang F. A highly-connected metal–organic framework based on [Co2(μ2-OH2)] units and mononuclear Co centers with high gas uptake capacity. CrystEngComm 2014. [DOI: 10.1039/c3ce42361a] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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17
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Paredes-García V, Santana RC, Madrid R, Vega A, Spodine E, Venegas-Yazigi D. Unusual Conformation of a Dinuclear Paddle Wheel Copper(II) Complex. Synthesis, Structural Characterization and EPR Studies. Inorg Chem 2013; 52:8369-77. [DOI: 10.1021/ic3027804] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
- Verónica Paredes-García
- Departamento de Ciencias Químicas, Universidad Andres Bello, Santiago, Chile
- CEDENNA, Santiago, Chile
| | - Ricardo C. Santana
- Instituto
de Física, Universidade Federal de Goiás, Goiânia, 74001-970, Brazil
| | | | - Andrés Vega
- Departamento de Ciencias Químicas, Universidad Andres Bello, Santiago, Chile
- CEDENNA, Santiago, Chile
| | - Evgenia Spodine
- CEDENNA, Santiago, Chile
- Facultad de Ciencias Químicas y Farmacéuticas, Universidad de Chile, Santiago, Chile
| | - Diego Venegas-Yazigi
- CEDENNA, Santiago, Chile
- Facultad de Química y Biología, Universidad de Santiago de Chile (USACH), Santiago,
Chile
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18
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Urothermal Synthesis of a Photoluminescent Coordination Polymer with Rutile Topology. J Inorg Organomet Polym Mater 2013. [DOI: 10.1007/s10904-013-9868-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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