1
|
Selin RO, Klemt I, Chernii VY, Losytskyy MY, Chernii S, Mular A, Gumienna-Kontecka E, Kovalska VB, Voloshin YZ, Vologzhanina AV, Dorovatovskii PV, Mokhir A. Synthesis and spectral characterization of the first fluorescein-tagged iron(ii) clathrochelates, their supramolecular interactions with globular proteins, and cellular uptake. RSC Adv 2021; 11:8163-8177. [PMID: 35423299 PMCID: PMC8695075 DOI: 10.1039/d0ra10502c] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2020] [Accepted: 02/02/2021] [Indexed: 01/29/2023] Open
Abstract
A fluorescein-tagged iron(ii) cage complex was obtained in a moderate total yield using a two-step synthetic procedure starting from its propargylamine-containing clathrochelate precursor. An 11-fold decrease in fluorescence quantum yield is observed in passing from the given fluorescein-based dye to its clathrochelate derivative. An excitation energy transfer from the terminal fluorescent group of the macrobicyclic molecule to its quasiaromatic highly π-conjugated clathrochelate framework can explain this effect. The kinetics of the hydrolysis of the acetyl groups of acetylated fluorescein azide and its clathrochelate derivative in the presence of one equivalent of BSA evidenced no strong supramolecular host-guest interactions between BSA and the tested compounds. Study of a chemical stability of the deacetylated iron(ii) clathrochelate suggested the formation of a supramolecular 1 : 1 BSA-clathrochelate assembly. Moreover, an addition of BSA or HSA to its solution caused the appearance of strong clathrochelate-based ICD outputs. The fluorescence emission anisotropy studies also evidenced the supramolecular binding of the fluorescein-tagged iron(ii) clathrochelate to the BSA macromolecule, leading to a high increase in this type of anisotropy. Subcellular uptake of the fluorescein-tagged molecules was visualized using fluorescence microscopy and showed its distribution to be mainly in the cytosol without entering the nucleus or accumulating in any other organelle. An X-rayed crystal of the above propargylamide macrobicyclic precursor with a reactive terminal C[triple bond, length as m-dash]C bond contains the clathrochelate molecules of two types, A and B. The encapsulated iron(ii) ion in these molecules is situated in the center of its FeN6-coordination polyhedron, the geometry of which is intermediate between a trigonal prism (TP) and a trigonal antiprism (TAP). The Fe-N distances vary from 1.8754(6) to 1.9286(4) Å and the heights h of their distorted TP-TAP polyhedra are very similar (2.30 and 2.31 Å); their values of φ are equal to 25.3 and 26.6°. In this crystal, the molecules of types A and B participate in different types of hydrogen bonding, giving H-bonded clathrochelate tetramers through their carboxylic and amide groups, respectively; these tetramers are connected to H-bonded chains.
Collapse
Affiliation(s)
- Roman O Selin
- Vernadskii Institute of General and Inorganic Chemistry NASU 32/34 Palladin Prosp. 03080 Kiev Ukraine
| | - Insa Klemt
- Organic Chemistry II, Friedrich-Alexander-University of Erlangen-Nuremberg Nikolaus-Fiebiger-Straße 10 91058 Erlangen Germany
| | - Viktor Ya Chernii
- Vernadskii Institute of General and Inorganic Chemistry NASU 32/34 Palladin Prosp. 03080 Kiev Ukraine
| | - Mykhaylo Yu Losytskyy
- Institute of Molecular Biology and Genetics, NASU 150 Zabolotnogo St. 03143 Kyiv Ukraine
| | - Svitlana Chernii
- Institute of Molecular Biology and Genetics, NASU 150 Zabolotnogo St. 03143 Kyiv Ukraine
| | - Andrzej Mular
- Faculty of Chemistry, University of Wroclaw 14 F. Joliot-Curie St. 50-383 Wroclaw Poland
| | | | - Vladyslava B Kovalska
- Institute of Molecular Biology and Genetics, NASU 150 Zabolotnogo St. 03143 Kyiv Ukraine
| | - Yan Z Voloshin
- Kurnakov Institute of General and Inorganic Chemistry of the Russian Academy of Sciences 31 Leninsky Prosp. 119991 Moscow Russia
- Nesmeyanov Institute of the Organoelement Compounds of the Russian Academy of Sciences 28 Vavilova St. 119991 Moscow Russia
| | - Anna V Vologzhanina
- Nesmeyanov Institute of the Organoelement Compounds of the Russian Academy of Sciences 28 Vavilova St. 119991 Moscow Russia
| | | | - Andriy Mokhir
- Organic Chemistry II, Friedrich-Alexander-University of Erlangen-Nuremberg Nikolaus-Fiebiger-Straße 10 91058 Erlangen Germany
| |
Collapse
|
2
|
Asachenko AF, Topchiy MA, Zelinskii GE, Limarev IP, Dorovatovskii PV, Vologzhanina AV, Voloshin YZ. Extension of an Encapsulating Macrobicyclic Ligand Using the Palladium-Catalyzed Suzuki–Miyaura Reaction of a Diiodoclathrochelate Iron(II) Tris-Glyoximate with Reactive Halogen Atoms in Its Apical Substituents. RUSS J INORG CHEM+ 2020. [DOI: 10.1134/s0036023620100022] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
|
3
|
Inhibition of DNA synthesis in the transcription system of Taq DNA polymerase by various iron and cobalt(II) tris-dioximate clathrochelates: In vitro study and X-ray structure of leader inhibitors, the carboxyl-terminated macrobicyclic complexes☆. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2018.06.004] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
|
4
|
Yonekura K, Yoshimura Y, Akehi M, Tsuchimoto T. A Heteroarylamine Library: Indium-Catalyzed Nucleophilic Aromatic Substitution of Alkoxyheteroarenes with Amines. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201701452] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Kyohei Yonekura
- Department of Applied Chemistry; School of Science and Technology; Meiji University; 1-1-1 Higashimita, Tama-ku Kawasaki 214-8571 Japan
| | - Yasuhiro Yoshimura
- Department of Applied Chemistry; School of Science and Technology; Meiji University; 1-1-1 Higashimita, Tama-ku Kawasaki 214-8571 Japan
| | - Mizuri Akehi
- Department of Applied Chemistry; School of Science and Technology; Meiji University; 1-1-1 Higashimita, Tama-ku Kawasaki 214-8571 Japan
| | - Teruhisa Tsuchimoto
- Department of Applied Chemistry; School of Science and Technology; Meiji University; 1-1-1 Higashimita, Tama-ku Kawasaki 214-8571 Japan
| |
Collapse
|
5
|
Dudkin SV, Belov AS, Nelyubina YV, Savchuk AV, Pavlov AA, Novikov VV, Voloshin YZ. Synthesis, X-ray structure and electrochemical properties of hybrid binuclear metallophthalocyaninate-capped tris-pyridineoximates. NEW J CHEM 2017. [DOI: 10.1039/c7nj00131b] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
New antimony-capped iron and nickel(ii) tris-pyridineoximates easily underwent transmetallation with zirconium and hafnium(iv) phthalocyaninates giving metallophthalocyaninato-cross-linked complexes.
Collapse
Affiliation(s)
- Semyon V. Dudkin
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences
- Moscow
- Russia
| | - Alexander S. Belov
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences
- Moscow
- Russia
| | - Yulia V. Nelyubina
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences
- Moscow
- Russia
| | - Anastasia V. Savchuk
- Vernadskii Institute of General and Inorganic Chemistry of the National Academy of Sciences of Ukraine
- 03680 Kiev
- Ukraine
| | - Alexander A. Pavlov
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences
- Moscow
- Russia
| | - Valentin V. Novikov
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences
- Moscow
- Russia
| | - Yan Z. Voloshin
- Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences
- Moscow
- Russia
- Gubkin Russian State University of Oil and Gas
- 119991 Moscow
| |
Collapse
|
6
|
Dudkin SV, Erickson NR, Vologzhanina AV, Novikov VV, Rhoda HM, Holstrom CD, Zatsikha YV, Yusubov MS, Voloshin YZ, Nemykin VN. Preparation, X-ray Structures, Spectroscopic, and Redox Properties of Di- and Trinuclear Iron-Zirconium and Iron-Hafnium Porphyrinoclathrochelates. Inorg Chem 2016; 55:11867-11882. [PMID: 27801586 DOI: 10.1021/acs.inorgchem.6b01936] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
The first hybrid di- and trinuclear iron(II)-zirconium(IV) and iron(II)-hafnium(IV) macrobicyclic complexes with one or two apical 5,10,15,20-tetraphenylporphyrin fragments were obtained using transmetalation reaction between n-butylboron-triethylantimony-capped or bis(triethylantimony)-capped iron(II) clathrochelate precursors and dichlorozirconium(IV)- or dichlorohafnium(IV)-5,10,15,20-tetraphenylporphyrins under mild conditions. New di- and trinuclear porphyrinoclathrochelates of general formula FeNx3((Bn-Bu)(MTPP)) and FeNx3(MTPP)2 [M = Zr, Hf; TPP = 5,10,15,20-tetraporphyrinato(2-); Nx = nioximo(2-)] were characterized by one-dimensional (1H and 13C{1H}) and two-dimensional (COSY and HSQC) NMR, high-resolution electrospray ionization mass spectrometry, UV-visible, and magnetic circular dichroism spectra, single-crystal X-ray diffraction experiments, as well as elemental analyses. Redox properties of all complexes were probed using electrochemical and spectroelectrochemical approaches. Electrochemical and spectroelectrochemical data suggestive of a very weak, if any, long-range electronic coupling between two porphyrin π-systems in FeNx3(MTPP)2 complexes. Density functional theory and time-dependent density functional theory calculations were used to correlate spectroscopic signatures and redox properties of new compounds with their electronic structures.
Collapse
Affiliation(s)
- Semyon V Dudkin
- Department of Chemistry & Biochemistry, University of Minnesota Duluth , Duluth, Minnesota 55812, United States.,Department of Technology of Organic Substances & Polymer Materials, Tomsk Polytechnic University , 634050 Tomsk, Russia.,Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences , 119991 Moscow, Russia
| | - Nathan R Erickson
- Department of Chemistry & Biochemistry, University of Minnesota Duluth , Duluth, Minnesota 55812, United States
| | - Anna V Vologzhanina
- Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences , 119991 Moscow, Russia
| | - Valentin V Novikov
- Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences , 119991 Moscow, Russia
| | - Hannah M Rhoda
- Department of Chemistry & Biochemistry, University of Minnesota Duluth , Duluth, Minnesota 55812, United States
| | - Cole D Holstrom
- Department of Chemistry & Biochemistry, University of Minnesota Duluth , Duluth, Minnesota 55812, United States
| | - Yuriy V Zatsikha
- Department of Chemistry & Biochemistry, University of Minnesota Duluth , Duluth, Minnesota 55812, United States.,Department of Chemistry, University of Manitoba , Winnipeg, Manitoba R3T 2N2, Canada
| | - Mekhman S Yusubov
- Department of Technology of Organic Substances & Polymer Materials, Tomsk Polytechnic University , 634050 Tomsk, Russia
| | - Yan Z Voloshin
- Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences , 119991 Moscow, Russia
| | - Victor N Nemykin
- Department of Chemistry & Biochemistry, University of Minnesota Duluth , Duluth, Minnesota 55812, United States.,Department of Chemistry, University of Manitoba , Winnipeg, Manitoba R3T 2N2, Canada
| |
Collapse
|
7
|
Wise MD, Holstein JJ, Pattison P, Besnard C, Solari E, Scopelliti R, Bricogne G, Severin K. Large, heterometallic coordination cages based on ditopic metallo-ligands with 3-pyridyl donor groups. Chem Sci 2015; 6:1004-1010. [PMID: 29560187 PMCID: PMC5811078 DOI: 10.1039/c4sc03046j] [Citation(s) in RCA: 93] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2014] [Accepted: 11/03/2014] [Indexed: 12/26/2022] Open
Abstract
Ditopic N-donor ligands with terminal 4-pyridyl groups are omnipresent in coordination-based self-assembly. The utilization of ligands with 3-pyridyl donor groups is significantly less common, because the intrinsic conformational flexibility of these ligands tends to favor the formation of small aggregates. Here, we show that large Pd6L1212+ cages can be obtained by reaction of Pd(ii) salts with metallo-ligands L bearing terminal 3-pyridyl groups. The easy-to-access metallo-ligands contain an Fe(ii) clathrochelate core. These sterically demanding clathrochelate complexes prevent the formation of smaller aggregates, which is observed for less bulky analogous building blocks. The cages were shown to bind BF4- and BPh4- anions in aqueous solvent mixtures, whilst the lateral size of the clathrochelate significantly affects their guest encapsulation behavior.
Collapse
Affiliation(s)
- Matthew D Wise
- Institut des Sciences et Ingénierie Chimiques , Ecole Polytechnique Fédérale de Lausanne (EPFL) , 1015 Lausanne , Switzerland .
| | - Julian J Holstein
- GZG , Abteilung Kristallographie , Georg-August-Universität Göttingen , Goldschmidtstr. 1 , 37077 Göttingen , Germany
- Global Phasing Ltd. , Sheraton House , Castle Park Cambridge CB3 0AX , England
| | - Philip Pattison
- Swiss-Norwegian Beamline , ESRF , F-38043 Grenoble , Switzerland
- Laboratory of Crystallography , Ecole Polytechnique Fédérale de Lausanne (EPFL) , 1015 Lausanne , Switzerland
| | - Celine Besnard
- Laboratory of X-ray Crystallography , University of Geneva , CH-1211-Geneva 4 , Switzerland
| | - Euro Solari
- Institut des Sciences et Ingénierie Chimiques , Ecole Polytechnique Fédérale de Lausanne (EPFL) , 1015 Lausanne , Switzerland .
| | - Rosario Scopelliti
- Institut des Sciences et Ingénierie Chimiques , Ecole Polytechnique Fédérale de Lausanne (EPFL) , 1015 Lausanne , Switzerland .
| | - Gerard Bricogne
- Global Phasing Ltd. , Sheraton House , Castle Park Cambridge CB3 0AX , England
| | - Kay Severin
- Institut des Sciences et Ingénierie Chimiques , Ecole Polytechnique Fédérale de Lausanne (EPFL) , 1015 Lausanne , Switzerland .
| |
Collapse
|
8
|
Voloshin YZ, Novikov VV, Nelyubina YV. Recent advances in biological applications of cage metal complexes. RSC Adv 2015. [DOI: 10.1039/c5ra10949c] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
This review highlights advances in biochemical and medical applications of cage metal complexes (clathrochelates) and related polyhedral compounds.
Collapse
Affiliation(s)
- Yan Z. Voloshin
- Nesmeyanov Institute of the Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Valentin V. Novikov
- Nesmeyanov Institute of the Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Yulia V. Nelyubina
- Nesmeyanov Institute of the Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| |
Collapse
|