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Ojo OS, Sale H, Symes MD, Wilson C. Synthesis of a chiral dinuclear Cu(II)-benzothiazolamine complex: evidence of cuprophilic interaction in its structure and exploration of its electrochemical properties and catalytic performance. Dalton Trans 2023. [PMID: 37902024 DOI: 10.1039/d3dt02994h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2023]
Abstract
The synthesis of a chiral dinuclear [Cu(OAc)2(L1)]2 complex (A) and its analogues Cu(OAc)2(L1)2 (B), Cu(OAc)2(L1)PPh3 (C), CuBr(L1)PPh3 (D), and Cu(OAc)2(L2) (E) is described. The X-ray structure of A reveals a cuprophilic interaction (2.65 Å) and shows that L1 behaves as a monodentate ligand. The stereogenic centre in L1 aligns the NH group to form non-covalent interactions with the paddle-wheel acetate groups at variable distances (2.4-2.5 Å and 2.2-2.7 Å). Thermogravimetric analysis confirmed our hypothesis that two equivalents of L1 (B) or a combination of L1 and PPh3 (C) would disrupt the cuprophilic interaction. All complexes, except D, showed irreversible redox waves by cyclic voltammetry. Complexes C and E have lower oxidative peaks (at 10 V s-1) than complex A between +0.40 and +0.60 V. This highlights the influence of ligand(s) on the redox behaviour of Cu(II) complexes. The significance of this electrochemical behaviour was evident in the Chan-Lam (CL) coupling reaction, where 2.5 mol% of A successfully facilitated the formation of a C-N bond. This study showcased the structure, thermal stability, electrochemical properties and catalytic performance of a chiral dinuclear copper(II)-benzothiazolamine complex.
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Affiliation(s)
- O Stephen Ojo
- WestCHEM, School of Chemistry, The Joseph Black Building, University of Glasgow, Glasgow, G12 8QQ, UK.
| | - Halilu Sale
- WestCHEM, School of Chemistry, The Joseph Black Building, University of Glasgow, Glasgow, G12 8QQ, UK.
| | - Mark D Symes
- WestCHEM, School of Chemistry, The Joseph Black Building, University of Glasgow, Glasgow, G12 8QQ, UK.
| | - Claire Wilson
- WestCHEM, School of Chemistry, The Joseph Black Building, University of Glasgow, Glasgow, G12 8QQ, UK.
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2
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Chachkov DV, Mikhailov OV. Heteroligand Iron(V) Complexes Containing Porphyrazine, trans-Di[benzo]porphyrazine or Tetra[benzo]porphyrazine, Oxo and Fluoro Ligands: DFT Quantum-Chemical Study. Int J Mol Sci 2023; 24:ijms24076442. [PMID: 37047415 PMCID: PMC10094394 DOI: 10.3390/ijms24076442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2023] [Revised: 03/25/2023] [Accepted: 03/27/2023] [Indexed: 04/14/2023] Open
Abstract
By using quantum chemical calculation data obtained by the DFT method with the B3PW91/TZVP and OPBE/TZVP levels, the possibility of the existence of three Fe(V) complexes, each of which contains in the inner coordination sphere porphyrazine/trans-di[benzo]porphyrazine/tetra[benzo]porphyrazine (phthalocyanine), oxygen (O2-) and fluorine (F-) ions, was shown. Key geometric parameters of the molecular structure of these heteroligand complexes are given; it is noted that FeN4 chelate nodes, and all metal-chelate and non-chelate cycles in each of these compounds, are practically planar with the deviation from coplanarity, as a rule, by no more than 0.5°. Furthermore, the bond angles between two nitrogen atoms and an Fe atom are equal to 90°, or less than this by no more than 0.1°, while the bond angles between donor atoms N, Fe, and O or F, in most cases, albeit insignificantly, differ from this value. Nevertheless, the bond angles formed by Fe, O and F atoms are exactly 180°. It is shown that good agreement occurs between the structural data obtained using the above two versions of the DFT method. NBO analysis data for these complexes are presented; it is noted that, according to both DFT methods used, the ground state of the each of three complexes under consideration may be a spin quartet or spin doublet. Additionally, standard thermodynamic parameters of formation (standard enthalpy ∆fH0, entropy S0 and Gibbs's energy ∆fG0) for the macrocyclic compounds under consideration are calculated.
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Affiliation(s)
- Denis V Chachkov
- Kazan Department of Joint Supercomputer Center of Russian Academy of Sciences-Branch of Federal Scientific Center "Scientific Research Institute for System Analysis of the RAS", Lobachevskii Street 2/31, 420111 Kazan, Russia
| | - Oleg V Mikhailov
- Department of Analytical Chemistry, Certification and Quality Management, Kazan National Research Technological University, K. Marx Street 68, 420015 Kazan, Russia
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3
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Chachkov DV, Mikhailov OV. DFT Method Used for Prediction of Molecular and Electronic Structures of Mn(VI) Macrocyclic Complexes with Porhyrazine/Phthalocyanine and Two Oxo Ligands. MATERIALS (BASEL, SWITZERLAND) 2023; 16:ma16062394. [PMID: 36984275 PMCID: PMC10059719 DOI: 10.3390/ma16062394] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2023] [Revised: 03/04/2023] [Accepted: 03/15/2023] [Indexed: 06/12/2023]
Abstract
By using the data of the DFT quantum chemical calculation in the OPBE/TZVP and B3PW91/TZVP levels, the possibility of the existence of a manganese(VI) heteroligand complex containing porphyrazine or its tetra[benzo] derivative (phthalocyanine) and two oxygen (O2-) ligands, which is still unknown for this element, is shown. The parameters of the molecular structure, multiplicity of the ground state, NBO analysis data and standard thermodynamic parameters (enthalpy ΔH0f, entropy S0f and Gibbs's energy ΔG0f of formation) of each of these metal macrocyclic compounds are presented. Additionally, it is noted that, based on the totality of structural data obtained by the above versions of the DFT method, the existence of a similar complex of manganese with di[benzo] derivative of porhyrazine and two oxygen (O2-) ligands seems doubtful.
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Affiliation(s)
- Denis V. Chachkov
- Kazan Department of Joint Supercomputer Center of Russian Academy of Sciences—Branch of Federal Scientific Center “Scientific Research Institute for System Analysis of the RAS”, Lobachevskii Street 2/31, 420111 Kazan, Russia
| | - Oleg V. Mikhailov
- Department of Analytical Chemistry, Certification and Quality Management, Kazan National Research Technological University, K. Marx Street 68, 420015 Kazan, Russia;
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Mikhailov OV, Chachkov DV. Novel porphyrazine derivative – 2,3,5,7,8,10,12,13,15,17,18,20-dodecaazaporphin and its complexes with M(II) ions of 3 d-elements: DFT quantum-chemical modeling. J PORPHYR PHTHALOCYA 2022. [DOI: 10.1142/s1088424622500547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Using three different versions of the density functional theory (DFT) – B3PW91/TZVP, M06/TZVP and OPBE/TZVP chemical models, the calculation of the molecular structures of (6666) macrocyclic complexes of 3d-elements (M) with a novel (NNNN)-donor macrocyclic ligand, 2,3,5,7,8,10,12,13,15,17,18,20-dodecaazaporphin (H2L), was carried out. The values of the most important bond lengths, bond and non-bond angles in these metal complexes were presented. The standard enthalpy, entropy, and Gibbs energy of formation of these compounds were also calculated. It was noted that according to the data of the above chemical models, [MnL], [FeL], [CoL], [NiL], and [CuL] complexes with this novel ligand have a flat MN4 chelate node and a planar structure as a whole, while the [TiL], [VL], [CrL] and [ZnL] complexes have a non-coplanar MN4 chelate node. Moreover, all 6-membered rings in each of these metal chelates are identical to each other (both in terms of the sum of the bond angles included in them and in their assortment); adjoining 5-membered cycles for the majority of M are also identical to each other (non-identity is noted only in the cases M = Ti, Mn, as well as for the original 2,3,5,7,8,10,12,13,15,17,18,20-dodecaazaporphin). A good agreement was also noted between similar parameters calculated by various DFT methods, both qualitatively and quantitatively.
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Affiliation(s)
- Oleg V. Mikhailov
- Kazan National Research Technological University, K. Marx Street 68, 420015 Kazan, Russia
| | - Denis V. Chachkov
- Kazan Department of Joint Supercomputer Center of Russian Academy of Sciences – Branch of Federal Scientific Center “Scientific Research Institute for System Analysis of the RAS”, Lobachevski Street 2/31, 420111 Kazan, Russia
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Kuhn L, Vil' VA, Barsegyan YA, Terent'ev AO, Alabugin IV. Carboxylate as a Non-innocent L-Ligand: Computational and Experimental Search for Metal-Bound Carboxylate Radicals. Org Lett 2022; 24:3817-3822. [PMID: 35609004 DOI: 10.1021/acs.orglett.2c01356] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
We show that the carboxylate radical acts as an L-ligand with certain high-spin transition metal centers. Such coordination preserves the O-radical character needed for C-H activation via hydrogen atom transfer. Capture of the new C-radical by the metal and subsequent reductive elimination leads to formal C-H acyloxylation. Decarboxylation of the RCO2 radical is minimized through hybridization effects introduced by spiro-cyclopropyl moiety.
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Affiliation(s)
- Leah Kuhn
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
| | - Vera A Vil'
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 47 Leninsky Prospect, Moscow, 119991, Russian Federation
| | - Yana A Barsegyan
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 47 Leninsky Prospect, Moscow, 119991, Russian Federation
| | - Alexander O Terent'ev
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 47 Leninsky Prospect, Moscow, 119991, Russian Federation
| | - Igor V Alabugin
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306, United States
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Heteroligand complexes of chromium, manganese, and iron with trans-dibenzoporphyrazine and two oxo ligands: DFT calculations. Russ Chem Bull 2022. [DOI: 10.1007/s11172-022-3462-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Chachkov DV, Mikhailov OV. Nickel macrocyclic complexes with porphyrazine and some [benzo]substituted, oxo and fluoro ligands: DFT analysis. J PORPHYR PHTHALOCYA 2022. [DOI: 10.1142/s1088424622500067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
By using quantum chemical calculation data obtained by the DFT method with the OPBE/TZVP and B3PW91/TZVP levels, the principal possibility of the existence of three heteroligand complexes of nickel, each of which was shown to contain in the inner coordination sphere either porphyrazine or di[benzo]- and tetra[benzo]porphyrazine, oxygen (O[Formula: see text] and fluorine (F[Formula: see text] ions. The data on the geometric parameters of the molecular structure of these complexes are presented; which shows that NiN4 chelate nodes, all metal-chelate and non-chelate cycles in each of these complexes, are strictly planar. The bond angles between two donor nitrogen atoms and a nickel atom are equal to 90[Formula: see text], while the bond angles between donor atoms N, Ni, and O or F, in most cases, albeit insignificantly, differ from this value. Nevertheless, the bond angles formed by Ni, O and F atoms are exactly 180[Formula: see text]. NBO analysis data for these complexes are presented; it was noted that the ground state of all these complexes was a spin doublet. It has been shown that a good agreement between the data obtained using the above two versions of the DFT method occurs. Also, standard thermodynamic parameters of formation (standard enthalpy [Formula: see text], entropy [Formula: see text] and Gibbs’s energy [Formula: see text] for the macrocyclic compounds under consideration were calculated.
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Affiliation(s)
- Denis V. Chachkov
- Kazan Department of Joint Supercomputer Center of Russian Academy of Sciences – Branch of Federal Scientific Center “Scientific Research Institute for System Analysis of the RAS”, Lobachevski Street 2/31, 420111 Kazan, Russia
| | - Oleg V. Mikhailov
- Kazan National Research Technological University, K. Marx Street 68, 420015 Kazan, Russia
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8
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Mikhailov OV, Chachkov DV. Copper macrocyclic complex with trans-di[benzo]-porphyrazine and two oxo ligands: DFT quantum-chemical design. J PORPHYR PHTHALOCYA 2021. [DOI: 10.1142/s1088424621501297] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Based on the results of a quantum chemical calculation using the DFT method in the OPBE/TZVP and B3PW91/TZVP, the possibility of the existence of a copper heteroligand complex with trans-di[benzo]derivative of 3,7,11,15-tetraazaporphine (trans-di[benzo]porphyrazine) and two oxygen (O[Formula: see text] ions that is still unknown for this element was shown. In addition, the data on the structural parameters, the multiplicity of the ground state, NBO analysis and standard thermodynamic parameters of formation (standard enthalpy [Formula: see text], entropy [Formula: see text] and Gibbs’s energy [Formula: see text] for this complex are presented.
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Affiliation(s)
- Oleg V. Mikhailov
- Kazan National Research Technological University, K. Marx Street 68, 420015 Kazan, Russia
| | - Denis V. Chachkov
- Kazan Department of Joint Supercomputer Center of Russian Academy of Sciences – Branch of Federal Scientific Center “Scientific Research Institute for System Analysis of the RAS” Lobachevski Street 2/31, 420111 Kazan, Russia
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Chachkov DV, Mikhailov OV. A new chemical compound with an unusual ratio of number of carbon and nitrogen atoms - C(N 12): quantum-chemical modelling. RSC Adv 2021; 11:35974-35981. [PMID: 35492795 PMCID: PMC9043186 DOI: 10.1039/d1ra07549g] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Accepted: 10/26/2021] [Indexed: 12/02/2022] Open
Abstract
Based on the results of a quantum chemical calculation using the DFT B3PW91/TZVP, MP2/TZVP and MP3/TZVP levels, the possibility of the existence of carbon–nitrogen compounds having the unusual carbon : nitrogen ratio 1 : 12, which is unknown for these elements at present, was shown. Data on the structural parameters are presented; it was shown that all CN4 groupings are strictly planar. In addition, the bond lengths formed by nitrogen atoms and a C atom are equal to each other, and the bond angles formed by nitrogen atoms and a C atom are equal to 90.0°, or practically do not differ from this value. Thermodynamical parameters, NBO analysis data and HOMO/LUMO images for this compound are presented, too. Good agreement was found between the calculated data obtained using the above three quantum-chemical methods. The possibility of the existence of tetracyclic carbon–nitrogen compounds having the unusual carbon : nitrogen ratio 1 : 12, which is unknown for these elements at the present, was shown.![]()
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Affiliation(s)
- Denis V Chachkov
- Kazan Department of Joint Supercomputer Center of Russian Academy of Sciences - Branch of Federal Scientific Center "Scientific Research Institute for System Analysis of the RAS" Lobachevskii Street 2/31 420111 Kazan Russia.,Kazan National Research Technological University K. Marx Street 68 420015 Kazan Russia
| | - Oleg V Mikhailov
- Kazan National Research Technological University K. Marx Street 68 420015 Kazan Russia
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Heteroligand macrotetracyclic complexes of 3d elements with phthalocyanine and two fluoride anions: molecular structures and thermodynamic parameters, as determined from DFT calculations. Russ Chem Bull 2021. [DOI: 10.1007/s11172-021-3237-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Mikhailov OV, Chachkov DV. (H,H)-Isomerism of cis- and trans-di[benzo]porphyrazines: Quantum chemical modeling within the framework of the DFT method. J PORPHYR PHTHALOCYA 2021. [DOI: 10.1142/s1088424621500747] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Quantum-chemical calculation of the molecular structures of potential isomeric (NNNN)- donoratomic macrocyclic tetradentate ligands, cis- and trans-di[benzo]porphyrazines, was carried out using the density functional theory (DFT) B3PW91/TZVP. It is noted that the first of these compounds can exist in four forms [so-called ([Formula: see text]-isomers], differing from each other by the mutual orientation of hydrogen atoms bonded to the nitrogen atoms, while the second compounds take the form of two similar isomers. The values of the most important bond lengths, bond and non-bond angles in each of these ([Formula: see text] -isomeric compounds, as well as the values of their relative energy, standard enthalpy, entropy, and Gibbs energy of formation are presented. It was found that the most stable among both cis- and trans-di[benzo]porphyrazines is the ([Formula: see text]-isomer with the trans-orientation of hydrogen atoms bonded to nitrogen atoms, while the ([Formula: see text] -isomers with cis-oriented hydrogen atoms for both of these compounds had significantly higher relative energies.
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Affiliation(s)
- Oleg V. Mikhailov
- Kazan National Research Technological University, K. Marx Street 68, 420015 Kazan, Russia
| | - Denis V. Chachkov
- Kazan Department of Joint Supercomputer Center of Russian Academy of Sciences – Branch of Federal Scientific Center “Scientific Research Institute for System Analysis of the RAS”, Lobachevski Street 2/31, 420111 Kazan, Russia
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Mikhailov OV, Chachkov DV. Copper (IV) Stabilization in Macrocyclic Complexes with 3,7,11,15-Tetraazaporphine, Its Di[benzo]- or Tetra[benzo] Derivatives and Oxide Anion: Quantum-Chemical Research. MATERIALS 2020; 13:ma13143162. [PMID: 32679851 PMCID: PMC7412188 DOI: 10.3390/ma13143162] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/29/2020] [Revised: 07/01/2020] [Accepted: 07/13/2020] [Indexed: 11/23/2022]
Abstract
Using the data of a quantum chemical modeling of molecular structures obtained by the density functional theory (DFT), the possibility of the existence of a copper macrocyclic complexes with 3,7,11,15-tetraazaaporphine, trans-di[benzo] 3,7,11,15-tetraazaaporphine or tetra[benzo] 3,7,11,15-tetraazaaporphine and oxide anion where oxidation state of copper is IV, was shown. The values of the parameters of molecular structures and NBO analysis for such complexes were presented, too.
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Affiliation(s)
- Oleg V. Mikhailov
- Department of Analytical Chemistry, Certification and Quality Management, Kazan National Research Technological University, K. Marx Street 68, Kazan 420015, Russia
- Correspondence:
| | - Denis V. Chachkov
- Kazan Department of Joint Supercomputer Center of Russian Academy of Sciences–Branch of Federal Scientific Center “Scientific Research Institute for System Analysis of the RAS”, Lobachevskii Street 2/31, Kazan 420111, Russia;
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M(VI) Oxidation State Stabilization in Iron, Cobalt and Nickel Heteroligand Metal Chelates Containing 3,7,11,15-Tetraazaporphine and Two Axial Oxo Ligands: Quantum-Chemical Simulation. Int J Mol Sci 2020; 21:ijms21041494. [PMID: 32098293 PMCID: PMC7073053 DOI: 10.3390/ijms21041494] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Revised: 02/19/2020] [Accepted: 02/20/2020] [Indexed: 11/17/2022] Open
Abstract
The quantum-chemical calculation of iron, cobalt and nickel heteroligand complexes with the double deprotonated form of (NNNN)-donor atomic ligand—3,7,11,15-tetraazaporphine—and two oxo ligands has been carried out. Data on the structural and standard thermodynamic parameters, NBO analysis and multiplicity of the ground states of these complexes have been presented. The given calculation has been made by using the density functional theory (DFT) method with the OPBE/TZVP basis set. Based on the results of this calculation, the possibility of the existence of oxidation state VI for the chemical elements indicated above—unusual for iron and cobalt, and for nickel, unknown at all—has been shown.
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Combination of phthalocyanine and fluoride ligand for Zn(III) stabilization: Quantum-chemical consideration. INORG CHEM COMMUN 2019. [DOI: 10.1016/j.inoche.2019.107526] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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