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Liu L, Wang S. An improved immune algorithm with parallel mutation and its application. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2023; 20:12211-12239. [PMID: 37501440 DOI: 10.3934/mbe.2023544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/29/2023]
Abstract
The objective of this paper is to design a fast and efficient immune algorithm for solving various optimization problems. The immune algorithm (IA), which simulates the principle of the biological immune system, is one of the nature-inspired algorithms and its many advantages have been revealed. Although IA has shown its superiority over the traditional algorithms in many fields, it still suffers from the drawbacks of slow convergence and local minima trapping problems due to its inherent stochastic search property. Many efforts have been done to improve the search performance of immune algorithms, such as adaptive parameter setting and population diversity maintenance. In this paper, an improved immune algorithm (IIA) which utilizes a parallel mutation mechanism (PM) is proposed to solve the Lennard-Jones potential problem (LJPP). In IIA, three distinct mutation operators involving cauchy mutation (CM), gaussian mutation (GM) and lateral mutation (LM) are conditionally selected to be implemented. It is expected that IIA can effectively balance the exploration and exploitation of the search and thus speed up the convergence. To illustrate its validity, IIA is tested on a two-dimension function and some benchmark functions. Then IIA is applied to solve the LJPP to exhibit its applicability to the real-world problems. Experimental results demonstrate the effectiveness of IIA in terms of the convergence speed and the solution quality.
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Affiliation(s)
- Lulu Liu
- College of Information Engineering, Shanghai Maritime University, Shanghai 201306, China
| | - Shuaiqun Wang
- College of Information Engineering, Shanghai Maritime University, Shanghai 201306, China
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Wang Y, Li T, Liu X, Yao J. An adaptive clonal selection algorithm with multiple differential evolution strategies. Inf Sci (N Y) 2022. [DOI: 10.1016/j.ins.2022.04.043] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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Xiao Z, Wang B, Li X, Du J. Workload-driven coordination between virtual machine allocation and task scheduling. Neural Comput Appl 2020. [DOI: 10.1007/s00521-019-04022-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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5
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Yan X, Li P, Tang K, Gao L, Wang L. Clonal selection based intelligent parameter inversion algorithm for prestack seismic data. Inf Sci (N Y) 2020. [DOI: 10.1016/j.ins.2019.12.083] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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6
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CSA-DE/EDA: a Novel Bio-inspired Algorithm for Function Optimization and Segmentation of Brain MR Images. Cognit Comput 2019. [DOI: 10.1007/s12559-019-09663-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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7
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A hybrid clonal selection algorithm with modified combinatorial recombination and success-history based adaptive mutation for numerical optimization. APPL INTELL 2018. [DOI: 10.1007/s10489-018-1291-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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8
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ARAe-SOM+BCO: An enhanced artificial raindrop algorithm using self-organizing map and binomial crossover operator. Neurocomputing 2018. [DOI: 10.1016/j.neucom.2017.11.045] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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9
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A Novel Hybrid Clonal Selection Algorithm with Combinatorial Recombination and Modified Hypermutation Operators for Global Optimization. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2016; 2016:6204728. [PMID: 27698662 PMCID: PMC5031906 DOI: 10.1155/2016/6204728] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/12/2016] [Accepted: 07/31/2016] [Indexed: 11/26/2022]
Abstract
Artificial immune system is one of the most recently introduced intelligence methods which was inspired by biological immune system. Most immune system inspired algorithms are based on the clonal selection principle, known as clonal selection algorithms (CSAs). When coping with complex optimization problems with the characteristics of multimodality, high dimension, rotation, and composition, the traditional CSAs often suffer from the premature convergence and unsatisfied accuracy. To address these concerning issues, a recombination operator inspired by the biological combinatorial recombination is proposed at first. The recombination operator could generate the promising candidate solution to enhance search ability of the CSA by fusing the information from random chosen parents. Furthermore, a modified hypermutation operator is introduced to construct more promising and efficient candidate solutions. A set of 16 common used benchmark functions are adopted to test the effectiveness and efficiency of the recombination and hypermutation operators. The comparisons with classic CSA, CSA with recombination operator (RCSA), and CSA with recombination and modified hypermutation operator (RHCSA) demonstrate that the proposed algorithm significantly improves the performance of classic CSA. Moreover, comparison with the state-of-the-art algorithms shows that the proposed algorithm is quite competitive.
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Wang S, Aorigele, Kong W, Zeng W, Hong X. Hybrid Binary Imperialist Competition Algorithm and Tabu Search Approach for Feature Selection Using Gene Expression Data. BIOMED RESEARCH INTERNATIONAL 2016; 2016:9721713. [PMID: 27579323 PMCID: PMC4989135 DOI: 10.1155/2016/9721713] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/15/2016] [Accepted: 06/22/2016] [Indexed: 11/17/2022]
Abstract
Gene expression data composed of thousands of genes play an important role in classification platforms and disease diagnosis. Hence, it is vital to select a small subset of salient features over a large number of gene expression data. Lately, many researchers devote themselves to feature selection using diverse computational intelligence methods. However, in the progress of selecting informative genes, many computational methods face difficulties in selecting small subsets for cancer classification due to the huge number of genes (high dimension) compared to the small number of samples, noisy genes, and irrelevant genes. In this paper, we propose a new hybrid algorithm HICATS incorporating imperialist competition algorithm (ICA) which performs global search and tabu search (TS) that conducts fine-tuned search. In order to verify the performance of the proposed algorithm HICATS, we have tested it on 10 well-known benchmark gene expression classification datasets with dimensions varying from 2308 to 12600. The performance of our proposed method proved to be superior to other related works including the conventional version of binary optimization algorithm in terms of classification accuracy and the number of selected genes.
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Affiliation(s)
- Shuaiqun Wang
- Information Engineering College, Shanghai Maritime University, Shanghai 201306, China
| | - Aorigele
- Faculty of Engineering, University of Toyama, Toyama-shi 930-8555, Japan
| | - Wei Kong
- Information Engineering College, Shanghai Maritime University, Shanghai 201306, China
| | - Weiming Zeng
- Information Engineering College, Shanghai Maritime University, Shanghai 201306, China
| | - Xiaomin Hong
- Information Engineering College, Shanghai Maritime University, Shanghai 201306, China
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Zare N, Shameli H, Parvin H. An innovative natural-derived meta-heuristic optimization method. APPL INTELL 2016. [DOI: 10.1007/s10489-016-0805-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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12
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Jiang Q, Wang L, Hei X, Yu G, Lin Y. The performance comparison of a new version of artificial raindrop algorithm on global numerical optimization. Neurocomputing 2016. [DOI: 10.1016/j.neucom.2015.09.093] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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13
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Pazhoohesh F, Hasanvand S, Mousavi Y. Optimal harmonic reduction approach for PWM AC–AC converter using nested memetic algorithm. Soft comput 2015. [DOI: 10.1007/s00500-015-1979-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Ma X, Liu F, Qi Y, Li L, Jiao L, Liu M, Wu J. MOEA/D with Baldwinian learning inspired by the regularity property of continuous multiobjective problem. Neurocomputing 2014. [DOI: 10.1016/j.neucom.2014.05.025] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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16
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Gyongyosi L, Imre S. Geometrical analysis of physically allowed quantum cloning transformations for quantum cryptography. Inf Sci (N Y) 2014. [DOI: 10.1016/j.ins.2014.07.010] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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17
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Niu Q, Li K, Irwin GW. Differential evolution combined with clonal selection for dynamic economic dispatch. J EXP THEOR ARTIF IN 2014. [DOI: 10.1080/0952813x.2014.954277] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Wang H, Jiao L, Shang R, He S, Liu F. A memetic optimization strategy based on dimension reduction in decision space. EVOLUTIONARY COMPUTATION 2014; 23:69-100. [PMID: 24520808 DOI: 10.1162/evco_a_00122] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
There can be a complicated mapping relation between decision variables and objective functions in multi-objective optimization problems (MOPs). It is uncommon that decision variables influence objective functions equally. Decision variables act differently in different objective functions. Hence, often, the mapping relation is unbalanced, which causes some redundancy during the search in a decision space. In response to this scenario, we propose a novel memetic (multi-objective) optimization strategy based on dimension reduction in decision space (DRMOS). DRMOS firstly analyzes the mapping relation between decision variables and objective functions. Then, it reduces the dimension of the search space by dividing the decision space into several subspaces according to the obtained relation. Finally, it improves the population by the memetic local search strategies in these decision subspaces separately. Further, DRMOS has good portability to other multi-objective evolutionary algorithms (MOEAs); that is, it is easily compatible with existing MOEAs. In order to evaluate its performance, we embed DRMOS in several state of the art MOEAs to facilitate our experiments. The results show that DRMOS has the advantage in terms of convergence speed, diversity maintenance, and portability when solving MOPs with an unbalanced mapping relation between decision variables and objective functions.
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Affiliation(s)
- Handing Wang
- Key Lab of Intelligent Perception and Image Understanding of Ministry of Education, International Research Center of Intelligent Perception and Computation, Xidian University, Xi'an, 710071, China
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Han M, Liu C, Xing J. An evolutionary membrane algorithm for global numerical optimization problems. Inf Sci (N Y) 2014. [DOI: 10.1016/j.ins.2014.02.057] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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20
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Learning paradigm based on jumping genes: A general framework for enhancing exploration in evolutionary multiobjective optimization. Inf Sci (N Y) 2013. [DOI: 10.1016/j.ins.2012.11.002] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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21
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Gyongyosi L, Imre S. Algorithmic superactivation of asymptotic quantum capacity of zero-capacity quantum channels. Inf Sci (N Y) 2013. [DOI: 10.1016/j.ins.2012.08.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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22
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Liu R, Jiao L, Zhang X, Li Y. Gene transposon based clone selection algorithm for automatic clustering. Inf Sci (N Y) 2012. [DOI: 10.1016/j.ins.2012.03.021] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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23
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Qi Y, Liu F, Liu M, Gong M, Jiao L. Multi-objective immune algorithm with Baldwinian learning. Appl Soft Comput 2012. [DOI: 10.1016/j.asoc.2012.04.005] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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24
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Zhao X, Song B, Huang P, Wen Z, Weng J, Fan Y. An improved discrete immune optimization algorithm based on PSO for QoS-driven web service composition. Appl Soft Comput 2012. [DOI: 10.1016/j.asoc.2012.03.040] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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CHEN JIANYONG, LIN QIUZHEN, SHEN LINLIN. AN IMMUNE-INSPIRED EVOLUTION STRATEGY FOR CONSTRAINED OPTIMIZATION PROBLEMS. INT J ARTIF INTELL T 2012. [DOI: 10.1142/s0218213011000279] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Based on clonal selection principle, this paper proposes an immune-inspired evolution strategy (IIES) for constrained optimization problems with two improvements. Firstly, in order to enhance global search capability, more clones are produced by individuals that have far-off nearest neighbors in the less-crowed regions. On the other hand, immune update mechanism is proposed to replace the worst individuals in clone population with the best individuals stored in immune memory in every generation. Therefore, search direction can always focus on the fittest individuals. These proposals are able to avoid being trapped in local optimal regions and remarkably enhance global search capability. In order to examine the optimization performance of IIES, 13 well-known benchmark test functions are used. When comparing with various state-of-the-arts and recently proposed competent algorithms, simulation results show that IIES performs better or comparably in most cases.
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Affiliation(s)
- JIANYONG CHEN
- Shenzhen City Key Laboratory of Embedded System Design, College of Computer Science and Software Engineering, Shenzhen University, Shenzhen 518060, P. R. China
| | - QIUZHEN LIN
- Shenzhen City Key Laboratory of Embedded System Design, College of Computer Science and Software Engineering, Shenzhen University, Shenzhen 518060, P. R. China
| | - LINLIN SHEN
- Shenzhen City Key Laboratory of Embedded System Design, College of Computer Science and Software Engineering, Shenzhen University, Shenzhen 518060, P. R. China
- State Key Laboratory of Networking and Switching Technology, (Beijing University of Posts and Telecommunications), P. R. China
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Mohammadi M, Raahemi B, Akbari A, Nassersharif B, Moeinzadeh H. Improving linear discriminant analysis with artificial immune system-based evolutionary algorithms. Inf Sci (N Y) 2012. [DOI: 10.1016/j.ins.2011.11.032] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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28
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Iterative two-step genetic-algorithm-based method for efficient polynomial B-spline surface reconstruction. Inf Sci (N Y) 2012. [DOI: 10.1016/j.ins.2010.09.031] [Citation(s) in RCA: 82] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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29
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Zhao X, Zhang C, Wang Y, Yang B. A hybrid approach based on MEP and CSP for contour registration. Appl Soft Comput 2011. [DOI: 10.1016/j.asoc.2011.05.020] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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30
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31
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Kang F, Li J, Ma Z. Rosenbrock artificial bee colony algorithm for accurate global optimization of numerical functions. Inf Sci (N Y) 2011. [DOI: 10.1016/j.ins.2011.04.024] [Citation(s) in RCA: 256] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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32
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Yang D, Jiao L, Gong M, Liu F. Artificial immune multi-objective SAR image segmentation with fused complementary features. Inf Sci (N Y) 2011. [DOI: 10.1016/j.ins.2011.02.025] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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33
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Disturbed Exploitation compact Differential Evolution for limited memory optimization problems. Inf Sci (N Y) 2011. [DOI: 10.1016/j.ins.2011.02.004] [Citation(s) in RCA: 106] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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34
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Haktanirlar Ulutas B, Kulturel-Konak S. A review of clonal selection algorithm and its applications. Artif Intell Rev 2011. [DOI: 10.1007/s10462-011-9206-1] [Citation(s) in RCA: 87] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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35
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Zhao X, Liu G, Liu H, Zhao G, Niu S. A New Clonal Selection Immune Algorithm with Perturbation Guiding Search and Non-uniform Hypermutation. INT J COMPUT INT SYS 2010. [DOI: 10.1080/18756891.2010.9727749] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022] Open
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