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Bhadra R, Singh PK, Mahmud M. HyEpiSeiD: a hybrid convolutional neural network and gated recurrent unit model for epileptic seizure detection from electroencephalogram signals. Brain Inform 2024; 11:21. [PMID: 39167115 PMCID: PMC11339197 DOI: 10.1186/s40708-024-00234-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2024] [Accepted: 07/24/2024] [Indexed: 08/23/2024] Open
Abstract
Epileptic seizure (ES) detection is an active research area, that aims at patient-specific ES detection with high accuracy from electroencephalogram (EEG) signals. The early detection of seizure is crucial for timely medical intervention and prevention of further injuries of the patients. This work proposes a robust deep learning framework called HyEpiSeiD that extracts self-trained features from the pre-processed EEG signals using a hybrid combination of convolutional neural network followed by two gated recurrent unit layers and performs prediction based on those extracted features. The proposed HyEpiSeiD framework is evaluated on two public datasets, the UCI Epilepsy and Mendeley datasets. The proposed HyEpiSeiD model achieved 99.01% and 97.50% classification accuracy, respectively, outperforming most of the state-of-the-art methods in epilepsy detection domain.
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Affiliation(s)
- Rajdeep Bhadra
- Department of Information Technology, Jadavpur University, Jadavpur University Second Campus, Plot No. 8, Salt Lake Bypass, LB Block, Sector III, Salt Lake City, 700 106, Kolkata, West Bengal, India
| | - Pawan Kumar Singh
- Department of Information Technology, Jadavpur University, Jadavpur University Second Campus, Plot No. 8, Salt Lake Bypass, LB Block, Sector III, Salt Lake City, 700 106, Kolkata, West Bengal, India
- Metharath University, 99, Moo 10, Bang Toei, Sam Khok, 12160, Pathum Thani, Thailand
| | - Mufti Mahmud
- Department of Computer Science, Nottingham Trent University, Nottingham, NG11 8NS, UK.
- Medical Technologies Innovation Facility, Nottingham Trent University, Nottingham, NG11 8NS, UK.
- Computing and Informatics Research Centre, Nottingham Trent University, Nottingham, NG11 8NS, UK.
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Khan SU, Jan SU, Koo I. Robust Epileptic Seizure Detection Using Long Short-Term Memory and Feature Fusion of Compressed Time-Frequency EEG Images. SENSORS (BASEL, SWITZERLAND) 2023; 23:9572. [PMID: 38067944 PMCID: PMC10708722 DOI: 10.3390/s23239572] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 11/27/2023] [Accepted: 11/28/2023] [Indexed: 12/18/2023]
Abstract
Epilepsy is a prevalent neurological disorder with considerable risks, including physical impairment and irreversible brain damage from seizures. Given these challenges, the urgency for prompt and accurate seizure detection cannot be overstated. Traditionally, experts have relied on manual EEG signal analyses for seizure detection, which is labor-intensive and prone to human error. Recognizing this limitation, the rise in deep learning methods has been heralded as a promising avenue, offering more refined diagnostic precision. On the other hand, the prevailing challenge in many models is their constrained emphasis on specific domains, potentially diminishing their robustness and precision in complex real-world environments. This paper presents a novel model that seamlessly integrates the salient features from the time-frequency domain along with pivotal statistical attributes derived from EEG signals. This fusion process involves the integration of essential statistics, including the mean, median, and variance, combined with the rich data from compressed time-frequency (CWT) images processed using autoencoders. This multidimensional feature set provides a robust foundation for subsequent analytic steps. A long short-term memory (LSTM) network, meticulously optimized for the renowned Bonn Epilepsy dataset, was used to enhance the capability of the proposed model. Preliminary evaluations underscore the prowess of the proposed model: a remarkable 100% accuracy in most of the binary classifications, exceeding 95% accuracy in three-class and four-class challenges, and a commendable rate, exceeding 93.5% for the five-class classification.
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Affiliation(s)
- Shafi Ullah Khan
- Department of Electrical Electronic and Computer Engineering, University of Ulsan, Ulsan 44610, Republic of Korea
| | - Sana Ullah Jan
- School of Computing, Edinburgh Napier University, Edinburgh EH10 5DT, UK;
| | - Insoo Koo
- Department of Electrical Electronic and Computer Engineering, University of Ulsan, Ulsan 44610, Republic of Korea
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Velasco I, Sipols A, De Blas CS, Pastor L, Bayona S. Motor imagery EEG signal classification with a multivariate time series approach. Biomed Eng Online 2023; 22:29. [PMID: 36959601 PMCID: PMC10035287 DOI: 10.1186/s12938-023-01079-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2022] [Accepted: 02/10/2023] [Indexed: 03/25/2023] Open
Abstract
BACKGROUND Electroencephalogram (EEG) signals record electrical activity on the scalp. Measured signals, especially EEG motor imagery signals, are often inconsistent or distorted, which compromises their classification accuracy. Achieving a reliable classification of motor imagery EEG signals opens the door to possibilities such as the assessment of consciousness, brain computer interfaces or diagnostic tools. We seek a method that works with a reduced number of variables, in order to avoid overfitting and to improve interpretability. This work aims to enhance EEG signal classification accuracy by using methods based on time series analysis. Previous work on this line, usually took a univariate approach, thus losing the possibility to take advantage of the correlation information existing within the time series provided by the different electrodes. To overcome this problem, we propose a multivariate approach that can fully capture the relationships among the different time series included in the EEG data. To perform the multivariate time series analysis, we use a multi-resolution analysis approach based on the discrete wavelet transform, together with a stepwise discriminant that selects the most discriminant variables provided by the discrete wavelet transform analysis RESULTS: Applying this methodology to EEG data to differentiate between the motor imagery tasks of moving either hands or feet has yielded very good classification results, achieving in some cases up to 100% of accuracy for this 2-class pre-processed dataset. Besides, the fact that these results were achieved using a reduced number of variables (55 out of 22,176) can shed light on the relevance and impact of those variables. CONCLUSIONS This work has a potentially large impact, as it enables classification of EEG data based on multivariate time series analysis in an interpretable way with high accuracy. The method allows a model with a reduced number of features, facilitating its interpretability and improving overfitting. Future work will extend the application of this classification method to help in diagnosis procedures for detecting brain pathologies and for its use in brain computer interfaces. In addition, the results presented here suggest that this method could be applied to other fields for the successful analysis of multivariate temporal data.
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Affiliation(s)
- I Velasco
- Department of Computer Science and Statistics, Rey Juan Carlos University, Madrid, Spain.
| | - A Sipols
- Department of Applied Mathematics, Science and Engineering of Materials and Electronic Technology, Rey Juan Carlos University, Madrid, Spain
| | - C Simon De Blas
- Department of Computer Science and Statistics, Rey Juan Carlos University, Madrid, Spain
| | - L Pastor
- Department of Computer Science and Statistics, Rey Juan Carlos University, Madrid, Spain
- Center for Computational Simulation, Universidad Politecnica de Madrid, Madrid, Spain
| | - S Bayona
- Department of Computer Science and Statistics, Rey Juan Carlos University, Madrid, Spain
- Center for Computational Simulation, Universidad Politecnica de Madrid, Madrid, Spain
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Özcan Türkmen M, Karaduman T, Mergen H. Comparison of ELISA and RIA methods to quantify arginine vasopressin hormone levels in cell culture. Biologia (Bratisl) 2022. [DOI: 10.1007/s11756-022-01301-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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Movahed RA, Rezaeian M. Automatic Diagnosis of Mild Cognitive Impairment Based on Spectral, Functional Connectivity, and Nonlinear EEG-Based Features. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2022; 2022:2014001. [PMID: 35991131 PMCID: PMC9388263 DOI: 10.1155/2022/2014001] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 05/21/2022] [Accepted: 07/30/2022] [Indexed: 11/18/2022]
Abstract
Accurate and early diagnosis of mild cognitive impairment (MCI) is necessary to prevent the progress of Alzheimer's and other kinds of dementia. Unfortunately, the symptoms of MCI are complicated and may often be misinterpreted as those associated with the normal ageing process. To address this issue, many studies have proposed application of machine learning techniques for early MCI diagnosis based on electroencephalography (EEG). In this study, a machine learning framework for MCI diagnosis is proposed in this study, which extracts spectral, functional connectivity, and nonlinear features from EEG signals. The sequential backward feature selection (SBFS) algorithm is used to select the best subset of features. Several classification models and different combinations of feature sets are measured to identify the best ones for the proposed framework. A dataset of 16 and 18 EEG data of normal and MCI subjects is used to validate the proposed system. Metrics including accuracy (AC), sensitivity (SE), specificity (SP), F1-score (F1), and false discovery rate (FDR) are evaluated using 10-fold crossvalidation. An average AC of 99.4%, SE of 98.8%, SP of 100%, F1 of 99.4%, and FDR of 0% have been provided by the best performance of the proposed framework using the linear support vector machine (LSVM) classifier and the combination of all feature sets. The acquired results confirm that the proposed framework provides an accurate and robust performance for recognizing MCI cases and outperforms previous approaches. Based on the obtained results, it is possible to be developed in order to use as a computer-aided diagnosis (CAD) tool for clinical purposes.
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Affiliation(s)
- Reza Akbari Movahed
- Department of Biomedical Engineering, Hamedan University of Technology, Hamedan, Iran
| | - Mohammadreza Rezaeian
- Department of Biomedical Engineering, Hamedan University of Technology, Hamedan, Iran
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Ibrahim FE, Emara HM, El-Shafai W, Elwekeil M, Rihan M, Eldokany IM, Taha TE, El-Fishawy AS, El-Rabaie ESM, Abdellatef E, Abd El-Samie FE. Deep-learning-based seizure detection and prediction from electroencephalography signals. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2022; 38:e3573. [PMID: 35077027 DOI: 10.1002/cnm.3573] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2021] [Revised: 01/19/2022] [Accepted: 01/19/2022] [Indexed: 06/14/2023]
Abstract
Electroencephalography (EEG) is among the main tools used for analyzing and diagnosing epilepsy. The manual analysis of EEG must be conducted by highly trained clinicians or neuro-physiologists; a process that is considered to have a comparatively low inter-rater agreement. Furthermore, the new data interpretation consumes an excessive amount of time and resources. Hence, an automatic seizure detection and prediction system can improve the quality of patient care in terms of shortening the diagnosis period, reducing manual errors, and automatically detecting debilitating events. Moreover, for patient treatment, it is important to alert the patients of epilepsy seizures prior to seizure occurrence. Various distinguished studies presented good solutions for two-class seizure detection problems with binary classification scenarios. To deal with these challenges, this paper puts forward effective approaches for EEG signal classification for normal, pre-ictal, and ictal activities. Three models are presented for the classification task. Two of them are patient-specific, while the third one is patient non-specific, which makes it better for the general classification tasks. The two-class classification is implemented between normal and pre-ictal activities for seizure prediction and between normal and ictal activities for seizure detection. A more generalized three-class classification framework is considered to identify all EEG signal activities. The first model depends on a Convolutional Neural Network (CNN) with residual blocks. It contains thirteen layers with four residual learning blocks. It works on spectrograms of EEG signal segments. The second model depends on a CNN with three layers. It also works on spectrograms. On the other hand, the third model depends on Phase Space Reconstruction (PSR) to eliminate the limitations of the spectrograms used in the first models. A five-layer CNN is used with this strategy. The advantage of the PSR is the direct projection from the time domain, which keeps the main trend of different signal activities. The third model deals with all signal activities, and it was tested for all patients of the CHB-MIT dataset. It has a superior performance compared to the first models and the state-of-the-art models.
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Affiliation(s)
- Fatma E Ibrahim
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Heba M Emara
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Walid El-Shafai
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
- Security Engineering Lab, Computer Science Department, Prince Sultan University, Riyadh, Saudi Arabia
| | - Mohamed Elwekeil
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
- Department of Electrical and Information Engineering (DIEI), University of Cassino and Southern Lazio, Cassino, 03043, Italy
| | - Mohamed Rihan
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
- Department of Electrical and Information Engineering (DIEI), University of Cassino and Southern Lazio, Cassino, 03043, Italy
| | - Ibrahim M Eldokany
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Taha E Taha
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Adel S El-Fishawy
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - El-Sayed M El-Rabaie
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
| | - Essam Abdellatef
- Delta Higher Institute for Engineering and Technology (DHIET), Mansoura, Egypt
| | - Fathi E Abd El-Samie
- Department of Electronics and Electrical Communications Engineering, Faculty of Electronic Engineering, Menoufia University, Menouf, Egypt
- Department of Information Technology, College of Computer and Information sciences, Princess Nourah Bint Abdulrahman University, Riyadh, Saudi Arabia
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Novel automated PD detection system using aspirin pattern with EEG signals. Comput Biol Med 2021; 137:104841. [PMID: 34509880 DOI: 10.1016/j.compbiomed.2021.104841] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Revised: 08/31/2021] [Accepted: 09/01/2021] [Indexed: 11/20/2022]
Abstract
BACKGROUND AND OBJECTIVE Parkinson's disease (PD) is one of the most common diseases worldwide which reduces quality of life of patients and their family members. The electroencephalogram (EEG) signals coupled with various advanced machine-learning algorithms have been widely used to detect PD automatically. In this paper, we propose a novel aspirin pattern to detect PD accurately using EEG signals. METHOD In this research, the feature generation ability of a chemical graph is investigated. Therefore, this work presents a new graph-based aspirin model for automated PD detection using EEG signals. The proposed method consists of (i) multilevel feature generation phase involving new aspirin pattern, statistical moments, and maximum absolute pooling (MAP), (ii) selection of most discriminative features using neighborhood component analysis (NCA), and (iii) classification using k nearest neighbor (kNN) for automated detection of PD and (iv) iterative majority voting. RESULTS A public dataset has been used to develop the proposed model. Two cases are created, and these cases consisted of two classes. Leave one subject out (LOSO) validation have been used to calculate robust results. Our proposal achieved 93.57% and 95.48% classification accuracies for Case 1 and Case 2 respectively. CONCLUSION Our developed automated PD model is accurate and equipped to be tested with more diverse EEG datasets.
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Saminu S, Xu G, Shuai Z, Abd El Kader I, Jabire AH, Ahmed YK, Karaye IA, Ahmad IS. A Recent Investigation on Detection and Classification of Epileptic Seizure Techniques Using EEG Signal. Brain Sci 2021; 11:668. [PMID: 34065473 PMCID: PMC8160878 DOI: 10.3390/brainsci11050668] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Revised: 05/14/2021] [Accepted: 05/16/2021] [Indexed: 02/07/2023] Open
Abstract
The benefits of early detection and classification of epileptic seizures in analysis, monitoring and diagnosis for the realization and actualization of computer-aided devices and recent internet of medical things (IoMT) devices can never be overemphasized. The success of these applications largely depends on the accuracy of the detection and classification techniques employed. Several methods have been investigated, proposed and developed over the years. This paper investigates various seizure detection algorithms and classifications in the last decade, including conventional techniques and recent deep learning algorithms. It also discusses epileptiform detection as one of the steps towards advanced diagnoses of disorders of consciousness (DOCs) and their understanding. A performance comparison was carried out on the different algorithms investigated, and their advantages and disadvantages were explored. From our survey, much attention has recently been paid to exploring the efficacy of deep learning algorithms in seizure detection and classification, which are employed in other areas such as image processing and classification. Hybrid deep learning has also been explored, with CNN-RNN being the most popular.
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Affiliation(s)
- Sani Saminu
- State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, China; (Z.S.); (I.A.E.K.); (I.A.K.); (I.S.A.)
- Biomedical Engineering Department, University of Ilorin, P.M.B 1515, Ilorin 240003, Nigeria;
| | - Guizhi Xu
- State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, China; (Z.S.); (I.A.E.K.); (I.A.K.); (I.S.A.)
| | - Zhang Shuai
- State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, China; (Z.S.); (I.A.E.K.); (I.A.K.); (I.S.A.)
| | - Isselmou Abd El Kader
- State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, China; (Z.S.); (I.A.E.K.); (I.A.K.); (I.S.A.)
| | - Adamu Halilu Jabire
- Department of Electrical and Electronics Engineering, Taraba State University, Jalingo 660242, Nigeria;
| | - Yusuf Kola Ahmed
- Biomedical Engineering Department, University of Ilorin, P.M.B 1515, Ilorin 240003, Nigeria;
| | - Ibrahim Abdullahi Karaye
- State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, China; (Z.S.); (I.A.E.K.); (I.A.K.); (I.S.A.)
| | - Isah Salim Ahmad
- State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, China; (Z.S.); (I.A.E.K.); (I.A.K.); (I.S.A.)
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