Organic contaminants in Ganga basin: from the Green Revolution to the emerging concerns of modern India

Comprehensive assessment of groundwater quality in the Prayagraj District, Ganga Basin

Urbanization has severely impacted the world water resources especially the shallow groundwater systems. There is a need of a robust method for quantifying the water quality degradation, which is still a challenge for most of the urban centers across the world. In this study, a highly urbanized region of Ganga basin is selected to critically evaluate commonly used WQIs and compare with fuzzy modeling. A total of 28 water samples were collected from diverse sources (surface and groundwaters) in the vicinity of urban region covering an area of 216 km2 during the premonsoon period. TDS, TH, NO3-, and F- values were found to be above the permissible limits in 57%, 89%, 4%, and 7% samples, respectively. The WQIs (entropy and integrated) outputs were found to be similar with 89% of the samples falling under moderate category. Fuzzy modeling was carried out allowing user-defined weighting factors for the most influential ions, and the output suggested 96% of the samples falling under moderate to excellent categories. Based on the chemical results and considering the lithology of the study area, the geochemical reactions controlling the water quality were deduced. This study outlines a systematic approach of evaluating the overall water quality of an urban region highlighting the merits and limitations of WQIs. It also justifies the immediate need to generate more robust data to achieve the sustainable development goals 6 (clean water and sanitation) and 11 (sustainability of cities and human settlement).

Chemotactic response of p-nitrophenol degrading Pseudomonas asiatica strain PNPG3 through phenotypic and genome sequence-based in silico studies

The Pseudomonas asiatica strain PNPG3 was documented to possess chemotactic potential toward p-nitrophenol (PNP), and other nitroaromatic compounds. Initial screening with drop plate and swarm plate assays demonstrated significant movement of the strain toward the test compounds. A quantitative capillary assay revealed the highest chemotactic potential of the strain toward 4-Aminophenol (4AP), (CI: 12.33); followed by p-benzoquinone (PBQ), (CI: 6.8); and PNP, (CI: 5.33). Gene annotation revealed the presence of chemotactic genes (Che), (Methyl-accepting Proteins) MCPs, rotary motor proteins, and flagellar proteins within the genome of strain PNPG3. The chemotactic machinery of the strain PNPG3 comprised of thirteen Che genes, twenty-two MCPs, eight rotary motors, and thirty-four flagellar proteins that are involved in sensing chemoattractant. Two chemotactic gene clusters were recorded in the genome, of which the major cluster consisted of two copies of CheW, one copy of CheA, CheY, CheZ, one MotD gene, and several Fli genes. Various conserved regions and motifs were documented in them using a standard bioinformatics tool. Genes involved in the chemotaxis of strain PNPG3 were compared with three closely related strains and one distantly related strain belonging to Burkholderia sp. Considering these phenotypic and genotypic data, it can be speculated that it is metabolism-dependent chemotaxis; and that test compound activated the Che. This study indicated that strain PNPG3 could be used as a model organism for the study of the molecular mechanism of chemotaxis and bioremediation of PNP.

Supplementary Information

The online version contains supplementary material available at 10.1007/s13205-023-03809-3.

Emerging organic contaminants in the River Ganga and key tributaries in the middle Gangetic Plain, India: Characterization, distribution & controls

The presence and distribution of emerging organic contaminants (EOCs) in freshwater environments is a key issue in India and globally, particularly due to ecotoxicological and potential antimicrobial resistance concerns. Here we have investigated the composition and spatial distribution of EOCs in surface water along a ∼500 km segment of the iconic River Ganges (Ganga) and key tributaries in the middle Gangetic Plain of Northern India. Using a broad screening approach, in 11 surface water samples, we identified 51 EOCs, comprising of pharmaceuticals, agrochemicals, lifestyle and industrial chemicals. Whilst the majority of EOCs detected were a mixture of pharmaceuticals and agrochemicals, lifestyle chemicals (and particularly sucralose) occurred at the highest concentrations. Ten of the EOCs detected are priority compounds (e.g. sulfamethoxazole, diuron, atrazine, chlorpyrifos, perfluorooctane sulfonate (PFOS), perfluorobutane sulfonate, thiamethoxam, imidacloprid, clothianidin and diclofenac). In almost 50% of water samples, sulfamethoxazole concentrations exceeded predicted no-effect concentrations (PNECs) for ecological toxicity. A significant downstream reduction in EOCs was observed along the River Ganga between Varanasi (Uttar Pradesh) and Begusarai (Bihar), likely reflecting dilution effects associated with three major tributaries, all with considerably lower EOC concentrations than the main Ganga channel. Sorption and/or redox controls were observed for some compounds (e.g. clopidol), as well as a relatively high degree of mixing of EOCs within the river. We discuss the environmental relevance of the persistence of several parent compounds (notably atrazine, carbamazepine, metribuzin and fipronil) and associated transformation products. Associations between EOCs and other hydrochemical parameters including excitation emission matrix (EEM) fluorescence indicated positive, significant, and compound-specific correlations between EOCs and tryptophan-, fulvic- and humic-like fluorescence. This study expands the baseline characterization of EOCs in Indian surface water and contributes to an improved understanding of the potential sources and controls on EOC distribution in the River Ganga and other large river systems.

Urbanization led to the abundance of Gram-negative, chemo-organo-heterotrophs, and antibiotic resistance genes in the downstream regions of the Ganga River water of India

The present investigation assesses the bacterial microbiome and antibiotic resistance genes (ARGs) of the river Ganga from Uttarakhand (upstream region; US group) and Uttar Pradesh (downstream region; DS group) regions using a 16S rRNA amplicon-based metagenomic approach. Gram-negative, aerobic, and chemo-organotrophic bacteria made up the majority of the bacterial genera during the overall analysis. Physicochemical analysis revealed a higher concentration of nitrate and phosphate in the downstream sites of the Ganga River. The prevalence of Gemmatimonas, Flavobacterium, Arenimonas, and Verrucomicrobia in the water of the DS region indicates a high organic load. Pseudomonas and Flavobacterium emerged as the most prevalent genera among the 35 significantly different shared genera (p-value < 0.05) in the US and DS regions, respectively. Overall antibiotic resistance analysis of the samples showed the dominance of β-lactam resistance (33.92%) followed by CAMP (cationic antimicrobial peptide) resistance (27.75%), and multidrug resistance (19.17%), vancomycin resistance (17.84%), and tetracycline resistance (0.77%). While comparing, the DS group exhibited a higher abundance of ARGs over the US group, where the CAMP resistance and β-lactam ARGs were dominant in the respective regions. The correlation (p-value < 0.05) analysis showed that most bacteria exhibit a significant correlation with tetracycline resistance followed by the phenicol antibiotic. The present findings draw attention to the need for regulated disposal of multiform human-derived wastes into the Ganga River to reduce the irrepressible ARGs dissemination.

Risk assessment of persistent pesticide pollution: Development of an indicator integrating site-specific characteristics

Detection of high pesticide concentrations in sediments and water often leads to prioritizing a site as being 'at risk'. However, the risk does not depend on pesticide concentration alone, but on other site-specific characteristics also. We developed an indicator that identifies the 'Level of Concern' by integrating five such characteristics: (i) pesticide concentrations in surface and groundwater causing risks to ecological health (ii) impacts on human health, (iii) water scarcity, (iv) agricultural production, and (v) biodiversity richness. We applied this framework in an agricultural region of the Lower Ganges Basin in West Bengal, India. We measured concentrations of selected organochlorine pesticides (OCPs) in surface and groundwater within an 8 km² area in 2019. Of 20 banned and restricted OCPs, 11 were detected as causing high risk to ecological health and 10 at concentrations above the Accepted Carcinogenic Risk Limit (ACRL) for humans. In the pre-monsoon, the mean concentrations of ΣOCPs in groundwater and surface water were 126.9 ng/L and 104 ng/L, in the monsoon they were 144.7 ng/L and 138 ng/L, and in the post-monsoon 122.1 ng/L and 147 ng/L respectively. In groundwater, no significant seasonal difference was observed in most pesticides. In the surface water, 7 pesticides were significantly higher in the monsoon and post-monsoon, which may be attributed to increased runoff as well as post monsoon application of OCPs. In September 2022 we again measured OCP concentrations in surface water and sediment. The mean concentration of 14 of the 20 measured OCPs were found to be significantly lower in the post-pandemic period compared to the pre-pandemic time. These lower pesticide concentrations may indicate a reduced use of OCPs in agricultural practices during the pandemic. This area was identified as being at the highest Level of Concern, even though the OCP concentrations alone conformed to general guidelines.

West African e-waste-soil assessed with a battery of cell-based bioassays

Soil samples randomly taken from major e-waste sites in West Africa (Nigeria, Benin and Ghana) were examined for an extensive range of organic contaminants. Cytotoxicity measurements and assessment of activation of xeno-sensing receptors from fish (Atlantic cod) were employed as a battery of in vitro biological assays to explore the quality and toxicity profile of West African e-waste soil. The concentrations of the measured contaminants of emerging concerns (CECs) and persistent organic pollutants (POPs) in the e-waste soil differs significantly from the reference soil with chemical profiles typically dominated by legacy polybrominated diphenyl ethers (PBDEs) (405.8 μgkg^-1) and emerging organophosphate ester flame retardant tris (1-chloro-2-propyl) phosphate (TCPP) (404 μgkg^-1), in addition to the short chain perfluorobutane sulfonate (PFBS) (275.3 μgkg^-1) and perfluorobutanoate (PFBA) (16 μgkg^-1). The study revealed that perfluorooctanoic acid (PFOA) occurred only in e-waste soil from Ghana and ranged from 2.6 to 5.0 μgkg^-1. Overall, non-polar e-waste soil-derived extracts had a stronger effect on COS-7 cell viability than the polar extracts and elutriates. The highest receptor activation was observed with single polar and non-polar extracts from the Nigeria and Benin sites, indicating hotspots with Er-, PPARa- and Ahr-agonist activities. Thus, the results obtained with our battery of in vitro biological assays underscored these e-waste sites as remarkably polluted spots with complex toxicity profiles of great concern for human and environmental health.

Biodegradation of p-nitrophenol by a member of the genus Brachybacterium, isolated from the river Ganges

A p-nitrophenol (PNP) degrading halotolerant, Gram-variable bacterial strain designated as DNPG3, was isolated from a water sample collected from the river Ganges in Hooghly, West Bengal (WB), India, by enrichment culture technique. Based on 16S rRNA gene sequence analysis (carried out at EzTaxon server and Ribosomal data base project site), the strain DNPG3 was identified as Brachybacterium sp., with B. zhongshanense strain JBT (97.08% identity) as it is nearest phylogenetic relative. The strain could tolerate up to 3 mM of PNP, while the optimal growth for the strain was recorded as 0.25 mM. The strain could carry out biodegradation of PNP with concomitant release of nitrite and p-benzoquinone (PBQ) was detected as a hydrolysis product. Under the catabolic condition, it could carry out 36% biodegradation of PNP within 144 h, while, under co-metabolic condition (with glucose), 100% biodegradation was achieved within 48 h at 30 °C. Calcium alginate bead-based cell immobilization studies (of the strain DNPG3) indicated complete biodegradation of PNP (under catabolic condition) within 26 h. This is the first report of PNP biodegradation by any representative strain of the genus Brachybacterium. The study definitely indicated that Brachybacterium sp. strain DNPG3 has biotechnological potential and the strain may be a suitable candidate for developing clean, green, eco-friendly, cost-effective bioremediation processes towards effective removal of PNP from the contaminated sites.

Supplementary Information

The online version contains supplementary material available at 10.1007/s13205-022-03263-7.

Occurrence, removal, and mass balance of contaminants of emerging concern in biological nutrient removal-based sewage treatment plants: Role of redox conditions in biotransformation and sorption

The study investigates the fate of 20 contaminants of emerging concern (CECs) in two full-scale wastewater treatment plants (WWTPs) based on the Biodenipho™ (WWTP 1) and anaerobic-anoxic-oxic (WWTP 2) processes. Samples of both the dissolved and solid phases (particulate and sludge) from all the wastewater and sludge processing-related units were studied using the mass balance approach to understand the distribution of CECs. The total mass load removal efficiency for anti-inflammatory (4), antibiotics (4), and hormones (5) was 76, 46, 93%, and 72, 38, 90% from WWTP 1 and 2, respectively. The mass load analysis showed that 8.3 kg and 6.5 kg of targeted contaminants enter the treatment plants per day while 0.35 kg and 0.32 kg are discharged along with effluent, and 1.5 g and 7.7 g (dry weight) are released through sludge in WWTP 1 and 2, respectively. Both biodegradation and sorption mechanisms depended on the redox conditions. Ammonia oxidizing conditions favoured the most for the biotransformation, followed by anaerobic and nitrate-reducing conditions. The study stresses the need for separate redox conditions for optimum removal of CECs and advanced tertiary treatment to remove recalcitrant compounds. The results help better understand the removal mechanisms of the CECs in BNR treatment.