Simulations of ion trapping in a micrometer-sized cylindrical ion trap

Flowing gas in mass spectrometer: method for characterization and impact on ion processing

Mass spectrometers are complex instrumentation systems where ions are transferred though different pressure regions and mass-analyzed under high vacuum. In this work, we have investigated the impact of the gas flows that exit almost universally in all pressure regions. We developed a method that incorporates the dynamic gas field with the electric field in the simulation of ion trajectories. The scope of the electro-hydrodynamic simulation (EHS) method was demonstrated for characterizing the ion optical systems at atmospheric pressure interfaces. With experimental validation, the trapping of the externally injected ions in a linear ion trap at low pressure was also studied. Further development of the EHS method and the knowledge acquired in this research are expected to be useful in the design of hybrid instruments and the study of ion energetics.

Miniaturization of a planar-electrode linear ion trap mass spectrometer

RATIONALE

We describe the miniaturization of a linear-type ion trap mass spectrometer for possible applications in portable chemical analysis. This work demonstrates the potential and the advantages of using lithographically patterned electrode plates in realizing an ion trap with dimension y0 less than 1 mm. The focus of this work was to demonstrate the viability and flexibility of the patterned electrode approach to trap miniaturization, and also to discover potential obstacles to its use.

METHODS

Planar, low-capacitance ceramic substrates were patterned with metal electrodes using photolithography. Plates that were originally used in a linear trap with a half-spacing (y0 ) of 2.19 mm were positioned much closer together such that y0 = 0.95 mm. A capacitive voltage divider provided different radiofrequency (RF) amplitudes to each of 10 electrode elements (5 on each side of the ejection slit), and the capacitor values were adjusted to provide the correct electric field at this closer spacing. The length of the trapping region, 45 mm, is unchanged from the previous device.

RESULTS

Electron ionization mass spectra of toluene and dichloromethane demonstrate instrument performance, with better than unit mass resolution for the molecular ion and fragment ion peaks of toluene. Compared with the larger plate spacing, the signal is reduced, corresponding to the reduced trapping capacity of the smaller device. However, the mass resolution of the larger device is retained.

CONCLUSIONS

Lithographically patterned substrates are a viable pathway to fabricating highly miniaturized ion traps for mass spectrometry. These results also demonstrate the possibility of significant reduction of the ion trap volume without physical modification of the electrodes. These experiments show promise for further miniaturization using assemblies of patterned ceramic plates. Copyright © 2014 John Wiley & Sons, Ltd.

Accelerated simulation study of space charge effects in quadrupole ion traps using GPU techniques

Space charge effects play important roles in the performance of various types of mass analyzers. Simulation of space charge effects is often limited by the computation capability. In this study, we evaluate the method of using graphics processing unit (GPU) to accelerate ion trajectory simulation. Simulation using GPU has been compared with multi-core central processing unit (CPU), and an acceleration of about 390 times have been obtained using a single computer for simulation of up to 10(5) ions in quadrupole ion traps. Characteristics of trapped ions can be investigated at detailed levels within a reasonable simulation time. Space charge effects on the trapping capacities of linear and 3D ion traps, ion cloud shapes, ion motion frequency shift, mass spectrum peak coalescence effects between two ion clouds of close m/z are studied with the ion trajectory simulation using GPU.

Ion trajectory simulations in a high-pressure cylindrical ion trap

We present the simulation of a cylindrical ion trap (CIT) at high pressure (5-25 Torr range). SIMION 7.0 software was used for the simulations. The effect of pressure, RF frequency and trap dimensions has been investigated. The shape of stability diagrams at non-zero pressure is drastically different from the one observed in vacuum. Preliminary experimental results are shown, using a r = z = 3 mm-long CIT at 12 Torr for trapping peptide and protein ions.

Circular arrays of polymer-based miniature rectilinear ion traps

The design and operation of an annular array of parallel, miniature rectilinear ion traps (RITs) is discussed. Stereolithography apparatus (SLA), a previously validated method for ion trap fabrication, was applied here to construct an array of mass analyzers and their mounting hardware. Two versions of the array were tested, using either six or twelve stretched RITs (x0 = 1.66 mm, y0 = 1.33 mm, z = 16.66 mm) mounted in parallel about the circumference of a circle with the interior and exterior x-electrode planes oriented tangential to the inner and outer annulus rings, respectively. The arrangement of the ion traps is such that the ions are radially ejected just above the throat of a centrally located electron multiplier detector into which they are accelerated. The mass analyzer array was mounted in a custom vacuum manifold. The resolution, mass-to-charge ratio (m/z) range, and MS/MS capabilities were tested using electrospray ionization (ESI). The devices were tested in two configurations: (i) separate ion sources for each trap, and (ii) a single ion source for the entire array.

Novel ion traps using planar resistive electrodes: implications for miniaturized mass analyzers

In radiofrequency ion traps, electric fields are produced by applying time-varying potentials between machined metal electrodes. The electrode shape constitutes a boundary condition and defines the field shape. This paper presents a new approach to making ion traps in which the electrodes consist of two ceramic discs, the facing surfaces of which are lithographically imprinted with sets of concentric metal rings and overlaid with a resistive material. A radial potential function can be applied to the resistive material such that the potential between the plates is quadrupolar, and ions are trapped between the plates. The electric field is independent of geometry and can be optimized electronically. The trap can produce any trapping field geometry, including both a toroidal trapping geometry and the traditional Paul-trap field. Dimensionally smaller ion trajectories, as would be produced in a miniaturized ion trap, can be achieved by increasing the potential gradient on the resistive material and operating the trap at higher frequency, rather than by making any physical changes to the trap or the electrodes. Obstacles to miniaturization of ion traps, such as fabrication tolerances, surface smoothness, electrode alignment, limited access for ionization or ion injection, and small trapping volume are addressed using this design.

Halo Ion Trap Mass Spectrometer

We describe a novel radio frequency ion trap mass analyzer based on toroidal trapping geometry and microfabrication technology. The device, called the halo ion trap, consists of two parallel ceramic plates, the facing surfaces of which are imprinted with sets of concentric ring electrodes. Radii of the imprinted rings range from 5 to 12 mm, and the spacing between the plates is 4 mm. Unlike conventional ion traps, in which hyperbolic metal electrodes establish equipotential boundary conditions, electric fields in the halo ion trap are established by applying different radio frequency potentials to each ring. The potential on each ring can be independently optimized to provide the best trapping field. The halo ion trap features an open structure, allowing easy access for in situ ionization. The toroidal geometry provides a large trapping and analyzing volume, increasing the number of ions that can be stored and reducing the effects of space-charge on mass analysis. Preliminary mass spectra show resolution (m/Deltam) of 60-75 when the trap is operated at 1.9 MHz and 500 Vp-p.

Current literature in mass spectrometry

In order to keep subscribers up‐to‐date with the latest developments in their field, John Wiley & Sons are providing a current awareness service in each issue of the journal. The bibliography contains newly published material in the field of mass spectrometry. Each bibliography is divided into 11 sections: 1 Books, Reviews & Symposia; 2 Instrumental Techniques & Methods; 3 Gas Phase Ion Chemistry; 4 Biology/Biochemistry: Amino Acids, Peptides & Proteins; Carbohydrates; Lipids; Nucleic Acids; 5 Pharmacology/Toxicology; 6 Natural Products; 7 Analysis of Organic Compounds; 8 Analysis of Inorganics/Organometallics; 9 Surface Analysis; 10 Environmental Analysis; 11 Elemental Analysis. Within each section, articles are listed in alphabetical order with respect to author (6 Weeks journals ‐ Search completed at 4th. Oct. 2006)

Design, microfabrication, and analysis of micrometer-sized cylindrical ion trap arrays

A description of the design and microfabrication of arrays of micrometer-scale cylindrical ion traps is offered. Electrical characterization and initial ion trapping experiments with a massively parallel array of 5 microm internal radius (r(0)) sized cylindrical ion traps (CITs) are also described. The ion trap, materials, and design are presented and shown to be critical in achieving minimal trapping potential while maintaining minimal power consumption. The ion traps, fabricated with metal electrodes, have inner radii of 1, 2, 5, and 10 microm and range from 5 to 24 microm in height. The electrical characteristics of packaged ion trap arrays were measured with a vector network analyzer. The testing focused on trapping toluene (C(7)H(8)), mass 91, 92, or 93 amu, in the 5 microm sized CITs. Ions were formed via electron impact ionization and were ejected by turning off the rf voltage applied to the ring electrode; a current signal was collected at this time. Optimum ionization and trapping conditions, such as a sufficient pseudopotential well and high ionization to ion loss rate ratio (as determined by simulation), proved to be difficult to establish due to the high device capacitance and the presence of exposed dielectric material in the trapping region. However, evidence was obtained suggesting the trapping of ions in 1%-15% of the traps in the array. These first tests on micrometer-scale CITs indicated the necessary materials and device design modifications for realizing ultrasmall and low power ion traps.