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Kuznetsova DA, Kuznetsov DM, Vasileva LA, Amerhanova SK, Valeeva DN, Salakhieva DV, Nikolaeva VA, Nizameev IR, Islamov DR, Usachev KS, Voloshina AD, Zakharova LY. Complexation of Oligo- and Polynucleotides with Methoxyphenyl-Functionalized Imidazolium Surfactants. Pharmaceutics 2022; 14:pharmaceutics14122685. [PMID: 36559178 PMCID: PMC9782993 DOI: 10.3390/pharmaceutics14122685] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Revised: 11/21/2022] [Accepted: 11/25/2022] [Indexed: 12/05/2022] Open
Abstract
Interaction between cationic surfactants and nucleic acids attracts much attention due to the possibility of using such systems for gene delivery. Herein, the lipoplexes based on cationic surfactants with imidazolium head group bearing methoxyphenyl fragment (MPI-n, n = 10, 12, 14, 16) and nucleic acids (oligonucleotide and plasmid DNA) were explored. The complex formation was confirmed by dynamic/electrophoretic light scattering, transmission electron microscopy, fluorescence spectroscopy, circular dichroism, and gel electrophoresis. The nanosized lipoplex formation (of about 100-200 nm), contributed by electrostatic, hydrophobic interactions, and intercalation mechanism, has been shown. Significant effects of the hydrocarbon tail length of surfactant and the type of nucleic acid on their interaction was revealed. The cytotoxic effect and transfection ability of lipoplexes studied were determined using M-HeLa, A549 cancer cell lines, and normal Chang liver cells. A selective reduced cytotoxic effect of the complexes on M-HeLa cancer cells was established, as well as a high ability of the systems to be transfected into cancer cells. MPI-n/DNA complexes showed a pronounced transfection activity equal to the commercial preparation Lipofectamine 3000. Thus, it has been shown that MPI-n surfactants are effective agents for nucleic acid condensation and can be considered as potential non-viral vectors for gene delivery.
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Affiliation(s)
- Darya A. Kuznetsova
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str. 8, 420088 Kazan, Russia
- Correspondence:
| | - Denis M. Kuznetsov
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str. 8, 420088 Kazan, Russia
| | - Leysan A. Vasileva
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str. 8, 420088 Kazan, Russia
| | - Syumbelya K. Amerhanova
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str. 8, 420088 Kazan, Russia
| | - Dilyara N. Valeeva
- Institute of Innovation Management, Kazan National Research Technological University, Karl Marx Str. 68, 420015 Kazan, Russia
| | - Diana V. Salakhieva
- Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kremlyovskaya Str. 18, 420008 Kazan, Russia
| | - Viktoriia A. Nikolaeva
- Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kremlyovskaya Str. 18, 420008 Kazan, Russia
| | - Irek R. Nizameev
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str. 8, 420088 Kazan, Russia
| | - Daut R. Islamov
- FRC Kazan Scientific Center of RAS, Russian Academy of Sciences, Lobachevsky Street 2/31, 420111 Kazan, Russia
| | - Konstantin S. Usachev
- FRC Kazan Scientific Center of RAS, Russian Academy of Sciences, Lobachevsky Street 2/31, 420111 Kazan, Russia
| | - Alexandra D. Voloshina
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str. 8, 420088 Kazan, Russia
| | - Lucia Ya. Zakharova
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, Arbuzov Str. 8, 420088 Kazan, Russia
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Guo H, Xie J, Liao T, Tuo X. Exploring the binding mode of donepezil with calf thymus DNA using spectroscopic and molecular docking methods. LUMINESCENCE 2020; 36:35-44. [PMID: 32614132 DOI: 10.1002/bio.3911] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2020] [Revised: 06/18/2020] [Accepted: 06/30/2020] [Indexed: 01/21/2023]
Abstract
Donepezil (DNP) is one of approved drugs to treat Alzheimer's disease (AD). However, the potential effect of DNP on DNA is still unclear. Therefore, the interaction of DNP with calf thymus DNA (DNA) was studied in vitro using spectroscopic and molecular docking methods. Steady-state and transient fluorescence experiments showed that there was a clear binding interaction between DNP and DNA, resulting from DNP fluorescence being quenched using DNA. DNP and DNA have one binding site between them, and the binding constant (Kb ) was 0.78 × 104 L·mol-1 at 298 K. In this binding process, hydrophobic force was the main interaction force, because enthalpy change (ΔH) and entropy change (ΔS) of DNP-DNA were 67.92 kJ·mol-1 and 302.96 J·mol-1 ·K-1 , respectively. DNP bound to DNA in a groove-binding mode, which was verified using a competition displacement study and other typical spectroscopic methods. Fourier transform infrared (FTIR) spectrum results showed that DNP interacted with guanine (G) and cytosine (C) bases of DNA. The molecular docking results further supported the results of spectroscopic experiments, and suggested that both Pi-Sigma force and Pi-Alkyl force were the major hydrophobic force functioning between DNP and DNA.
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Affiliation(s)
- Hui Guo
- College of Chemistry, Nanchang University, Nanchang, Jiangxi, China
| | - Jiawen Xie
- College of Chemistry, Nanchang University, Nanchang, Jiangxi, China
| | - Tancong Liao
- School of Life Sciences, Nanchang University, Nanchang, Jiangxi, China
| | - Xun Tuo
- College of Chemistry, Nanchang University, Nanchang, Jiangxi, China
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Guo Q, Zhang Z, Song Y, Liu S, Gao W, Qiao H, Guo L, Wang J. Investigation on interaction of DNA and several cationic surfactants with different head groups by spectroscopy, gel electrophoresis and viscosity technologies. CHEMOSPHERE 2017; 168:599-605. [PMID: 27838032 DOI: 10.1016/j.chemosphere.2016.11.019] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2016] [Revised: 10/01/2016] [Accepted: 11/05/2016] [Indexed: 06/06/2023]
Abstract
In this study, the interaction between DNA and several cationic surfactants with different head groups such as ethyl hexadecyl dimethyl ammonium bromide (EHDAB), hexadecyl dimethyl benzyl ammonium chloride (HDBAC), and cetyl pyridinium bromide (CPB) were investigated by UV-vis absorption, fluorescence and circular dichroism (CD) spectroscopy, gel electrophoresis, and viscosity technologies. The results show that these cationic surfactants can interact with DNA and major binding modes are electrostatic and hydrophobic. Also, CPB and HDBAC molecules interact with DNA by partial intercalation, and CPB has slightly stronger intercalation than HDBAC, while EHDAB interacts with DNA by non-intercalation. The different head groups of the surfactant molecules can influence the interaction strength. CPB has the stronger interaction with DNA than the others. Moreover, surfactant concentration, the ratio of DNA and fluorescence probe, ionic strength can influence the interaction. The surfactants may interact with DNA by the competition reactions with BR for DNA-BR. The increase of ionic strength may favor the surface binding between DNA and surfactants to some extent. This work provides deep mechanistic insight on the toxicity of cationic surfactants with different head groups to DNA molecules.
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Affiliation(s)
- Qing Guo
- School of Environment, Liaoning University, Shenyang 110036, PR China
| | - Zhaohong Zhang
- School of Environment, Liaoning University, Shenyang 110036, PR China.
| | - Youtao Song
- School of Environment, Liaoning University, Shenyang 110036, PR China
| | - Shuo Liu
- Shenyang Red Cross Hospital, Shenyang 110014, PR China
| | - Wei Gao
- School of Environment, Liaoning University, Shenyang 110036, PR China
| | - Heng Qiao
- School of Environment, Liaoning University, Shenyang 110036, PR China; Pony Testing International Group, Qingdao 266100, PR China
| | - Lili Guo
- School of Environment, Liaoning University, Shenyang 110036, PR China
| | - Jun Wang
- School of Chemistry, Liaoning University, Shenyang 110036, PR China.
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