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Król-Górniak A, Pomastowski P, Railean-Plugaru V, Žuvela P, Wong MW, Pauter K, Szultka-Młyńska M, Buszewski B. The study of the molecular mechanism of Lactobacillus paracasei clumping via divalent metal ions by electrophoretic separation. J Chromatogr A 2021; 1652:462127. [PMID: 34214833 DOI: 10.1016/j.chroma.2021.462127] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Revised: 03/17/2021] [Accepted: 03/26/2021] [Indexed: 11/18/2022]
Abstract
In this work, the molecular mechanism of Lactobacillus paracasei bio-colloid clumping under divalent metal ions treatment such as zinc, copper and magnesium at constant concentrations was studied. The work involved experimental (electrophoretic - capillary electrophoresis in pseudo-isotachophoresis mode, spectroscopic and spectrometric - FT-IR and MALDI-TOF-MS, microscopic - fluorescent microscopy, and flow cytometry) and theoretical (DFT calculations of model complex systems) characterization. Electrophoretic results have pointed out the formation of aggregates under the Zn2+ and Cu2+ modification, whereas the use of the Mg2+ allowed focusing the zone of L. paracasei biocolloid. According to the FT-IR analysis, the major functional groups involved in the aggregation are deprotonated carboxyl and amide groups derived from the bacterial surface structure. Nature of the divalent metal ions was shown to be one of the key factors influencing the bacterial aggregation process. Proteomic analysis showed that surface modification had a considerable impact on bacteria molecular profiles and protein expression, mainly linked to the activation of carbohydrate and nucleotides metabolism as well with the transcription regulation and membrane transport. Density-functional theory (DFT) calculations of modeled Cu2+, Mg2+ and Zn2+ coordination complexes support the interaction between the divalent metal ions and bacterial proteins. Consequently, the possible mechanism of the aggregation phenomenon was proposed. Therefore, this comprehensive study could be further applied in evaluation of biocolloid aggregation under different types of metal ions.
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Affiliation(s)
- Anna Król-Górniak
- Chair of Environmental Chemistry and Bioanalytics, Faculty of Chemistry, Poland; Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, 7 Gagarina Str., 87-100 Torun, Poland
| | - Paweł Pomastowski
- Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, 7 Gagarina Str., 87-100 Torun, Poland
| | - Viorica Railean-Plugaru
- Chair of Environmental Chemistry and Bioanalytics, Faculty of Chemistry, Poland; Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, 7 Gagarina Str., 87-100 Torun, Poland
| | - Petar Žuvela
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
| | - Ming Wah Wong
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
| | - Katarzyna Pauter
- Chair of Environmental Chemistry and Bioanalytics, Faculty of Chemistry, Poland; Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, 7 Gagarina Str., 87-100 Torun, Poland
| | - Małgorzata Szultka-Młyńska
- Chair of Environmental Chemistry and Bioanalytics, Faculty of Chemistry, Poland; Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, 7 Gagarina Str., 87-100 Torun, Poland
| | - Bogusław Buszewski
- Chair of Environmental Chemistry and Bioanalytics, Faculty of Chemistry, Poland; Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, 7 Gagarina Str., 87-100 Torun, Poland.
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Rapid “one-pot” preparation of polymeric monolith via photo-initiated thiol-acrylate polymerization for capillary liquid chromatography. Anal Chim Acta 2016; 925:88-96. [DOI: 10.1016/j.aca.2016.04.012] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2016] [Revised: 03/25/2016] [Accepted: 04/09/2016] [Indexed: 01/08/2023]
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Whitcombe MJ, Kirsch N, Nicholls IA. Molecular imprinting science and technology: a survey of the literature for the years 2004-2011. J Mol Recognit 2014; 27:297-401. [PMID: 24700625 DOI: 10.1002/jmr.2347] [Citation(s) in RCA: 275] [Impact Index Per Article: 27.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2013] [Revised: 10/28/2013] [Accepted: 12/01/2013] [Indexed: 12/11/2022]
Abstract
Herein, we present a survey of the literature covering the development of molecular imprinting science and technology over the years 2004-2011. In total, 3779 references to the original papers, reviews, edited volumes and monographs from this period are included, along with recently identified uncited materials from prior to 2004, which were omitted in the first instalment of this series covering the years 1930-2003. In the presentation of the assembled references, a section presenting reviews and monographs covering the area is followed by sections describing fundamental aspects of molecular imprinting including the development of novel polymer formats. Thereafter, literature describing efforts to apply these polymeric materials to a range of application areas is presented. Current trends and areas of rapid development are discussed.
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Wang ZF, Cheng S, Ge SL, Zhu JK, Wang H, Chen QM, Wang QJ, He PG, Fang YZ. Microchip electrophoresis of bacteria using lipid-based liquid crystalline nanoparticles. J Chromatogr A 2011; 1218:8281-8. [DOI: 10.1016/j.chroma.2011.09.028] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2011] [Revised: 09/10/2011] [Accepted: 09/12/2011] [Indexed: 01/10/2023]
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Li J, Feng J, Dang Q, Qiao Y, Zhao J, Zhang S, Sun H, Wen X, Yuan Z. Affinity adsorption mechanism studies of adsorbents for oligopeptides using model polymer. POLYMER 2009. [DOI: 10.1016/j.polymer.2009.01.030] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Kłodzińska E, Buszewski B. Electrokinetic Detection and Characterization of Intact Microorganisms. Anal Chem 2008; 81:8-15. [DOI: 10.1021/ac801369a] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Hrynkiewicz K, Kłodzińska E, Dahm H, Szeliga J, Jackowski M, Buszewski B. Combination of capillary electrophoresis, PCR and physiological assays in differentiation of clinical strains of Staphylococcus aureus. FEMS Microbiol Lett 2008; 286:1-8. [PMID: 18631368 DOI: 10.1111/j.1574-6968.2008.01245.x] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
Fast, sensitive and cheap determination of pathogenic bacteria is extremely important in many branches, for example biotechnology, quality control, analysis of samples and antimicrobial therapy. The development and application of analytical techniques in practice could provide new possibilities in this regard. The bacterial pathogen Staphylococcus aureus is responsible for a significant amount of human morbidity and mortality. Rapid and sensitive determination is therefore very important. In the present study, novel methods, based on capillary zone electrophoresis and (as confirmation of these results) molecular analysis of a part of the coag gene, were developed for identification and differentiation of three S. aureus strains. The electrophoretic measurements rely on the differential mobility of bacteria in the fused silica capillary under the direct current electric field. To perform coagulase gene typing, the repeated units encoding hypervariable regions of the S. aureus gene were amplified using the PCR technique followed by restriction enzyme digestion and analysis of restriction fragment length polymorphism patterns as well as sequencing. Finally, the results of electrophoretic measurements with molecular analysis were compared.
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Affiliation(s)
- Katarzyna Hrynkiewicz
- Department of Microbiology, Institute of General and Molecular Biology, Nicolaus Copernicus University, Toruń, Poland.
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Buszewski B, Kłodzińska E. Determination of pathogenic bacteria by CZE with surface-modified capillaries. Electrophoresis 2008; 29:4177-84. [DOI: 10.1002/elps.200800080] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Urban J, Jandera P. Polymethacrylate monolithic columns for capillary liquid chromatography. J Sep Sci 2008; 31:2521-40. [DOI: 10.1002/jssc.200800182] [Citation(s) in RCA: 112] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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