Medical diagnosis of atherosclerosis from Carotid Artery Doppler Signals using principal component analysis (PCA), k-NN based weighting pre-processing and Artificial Immune Recognition System (AIRS)

The spatial distribution of BUN reference values of Chinese healthy adults: a cross-section study

The blood urea nitrogen (BUN) is generally regarded as a significant serum marker in estimating renal function. This study aims to explore the geographical distribution of BUN reference values of Chinese healthy adults, and provide a scientific basis for determining BUN reference values of Chinese healthy adults of different regions according to local conditions. A total of 25,568 BUN reference values of healthy adults from 241 Chinese cities were collected in this study, and 17 geographical indices were selected as explanatory variables. The correlation analysis was used to examine the significance between BUN reference value and geographical factors, then five significant indices were extracted to build two predictive models, including principal component analysis (PCA) and support vector regression (SVR) model, then the optimal model was selected by model test to predict BUN reference values of the whole China, finally the distribution map was produced. The results show that BUN reference value of Chinese healthy adult was characteristically associated with latitude, altitude, annual mean temperature, annual mean relative humidity, and annual precipitation. The model test shows, compared with SVR model, the PCA model possesses superior simulative and predictive ability. The distribution map shows that the BUN reference values of Chinese healthy adult are lower in the east and higher in the west. These results indicate that the BUN reference value is significantly affected by geographical environment, and the BUN reference values of different regions could be seen clearly on distribution map.

Role of Soft Computing Approaches in HealthCare Domain: A Mini Review

In the present era, soft computing approaches play a vital role in solving the different kinds of problems and provide promising solutions. Due to popularity of soft computing approaches, these approaches have also been applied in healthcare data for effectively diagnosing the diseases and obtaining better results in comparison to traditional approaches. Soft computing approaches have the ability to adapt itself according to problem domain. Another aspect is a good balance between exploration and exploitation processes. These aspects make soft computing approaches more powerful, reliable and efficient. The above mentioned characteristics make the soft computing approaches more suitable and competent for health care data. The first objective of this review paper is to identify the various soft computing approaches which are used for diagnosing and predicting the diseases. Second objective is to identify various diseases for which these approaches are applied. Third objective is to categories the soft computing approaches for clinical support system. In literature, it is found that large number of soft computing approaches have been applied for effectively diagnosing and predicting the diseases from healthcare data. Some of these are particle swarm optimization, genetic algorithm, artificial neural network, support vector machine etc. A detailed discussion on these approaches are presented in literature section. This work summarizes various soft computing approaches used in healthcare domain in last one decade. These approaches are categorized in five different categories based on the methodology, these are classification model based system, expert system, fuzzy and neuro fuzzy system, rule based system and case based system. Lot of techniques are discussed in above mentioned categories and all discussed techniques are summarized in the form of tables also. This work also focuses on accuracy rate of soft computing technique and tabular information is provided for each category including author details, technique, disease and utility/accuracy.

Robust information gain based fuzzy c-means clustering and classification of carotid artery ultrasound images

In this paper, a robust method is proposed for segmentation of medical images by exploiting the concept of information gain. Medical images contain inherent noise due to imaging equipment, operating environment and patient movement during image acquisition. A robust medical image segmentation technique is thus inevitable for accurate results in subsequent stages. The clustering technique proposed in this work updates fuzzy membership values and cluster centroids based on information gain computed from the local neighborhood of a pixel. The proposed approach is less sensitive to noise and produces homogeneous clustering. Experiments are performed on medical and non-medical images and results are compared with state of the art segmentation approaches. Analysis of visual and quantitative results verifies that the proposed approach outperforms other techniques both on noisy and noise free images. Furthermore, the proposed technique is used to segment a dataset of 300 real carotid artery ultrasound images. A decision system for plaque detection in the carotid artery is then proposed. Intima media thickness (IMT) is measured from the segmented images produced by the proposed approach. A feature vector based on IMT values is constructed for making decision about the presence of plaque in carotid artery using probabilistic neural network (PNN). The proposed decision system detects plaque in carotid artery images with high accuracy. Finally, effect of the proposed segmentation technique has also been investigated on classification of carotid artery ultrasound images.

Improving discrimination in the grading of rat mammary tumors using two-dimensional mapping of histopathological observations

This work aims at characterizing rat mammary tumors induced by 7,12-dimethylbenz(a)anthracene (DMBA) and the respective malignancy potential, commonly graded with histopathology features grouped by intensity levels. Tumors were described over fourteen multiple ranged microscopic parameters and a comprehensive characterization of the histological patterns and their relation with tumor grade was carried out by principal component analysis (PCA). The number of histological patterns present on a tumor tends to correlate with malignant features. High grade tumors are characterized by the presence of several structural patterns, with cribriform prevalence and necrosis. The cribriform pattern correlates with grading, i.e., tumors having a higher predominance of the cribriform pattern are likely to be more malignant. The findings may represent a benchmark for similar characterization studies in other models.

A biological continuum based approach for efficient clinical classification

Clinical feature selection problem is the task of selecting and identifying a subset of informative clinical features that are useful for promoting accurate clinical diagnosis. This is a significant task of pragmatic value in the clinical settings as each clinical test is associated with a different financial cost, diagnostic value, and risk for obtaining the measurement. Moreover, with continual introduction of new clinical features, the need to repeat the feature selection task can be very time consuming. Therefore to address this issue, we propose a novel feature selection technique for diagnosis of myocardial infarction - one of the leading causes of morbidity and mortality in many high-income countries. This method adopts the conceptual framework of biological continuum, the optimization capability of genetic algorithm for performing feature selection and the classification ability of support vector machine. Together, a network of clinical risk factors, called the biological continuum based etiological network (BCEN), was constructed. Evaluation of the proposed methods was carried out using the cardiovascular heart study (CHS) dataset. Results demonstrate a significant speedup of 4.73-fold can be achieved for the development of MI classification model. The key advantage of this methodology is the provision of a reusable (feature subset) paradigm for efficient development of up-to-date and efficacious clinical classification models.

Non-invasive diagnosis of stress urinary incontinence sub types using wavelet analysis, shannon entropy and principal component analysis

Urinary incontinence is a common female disorder. Although generally not a serious condition, it negatively affects the lifestyle and daily activity of subjects. Stress urinary incontinence (SUI) is the most versatile of several incontinence types and is distinguished by physical degeneration of the continence-providing mechanism. Some surgical treatment methods exist, but the success of the surgery mainly depends upon a correct diagnosis. Diagnosis has two major steps: subjects who are suffering from true SUI must be identified, and the SUI sub-type must be determined, because each sub-type is treated with a different surgery. The first step is straightforward and uses standard identification methods. The second step, however, requires invasive, uncomfortable urodynamic studies that are difficult to apply. Many subjects try to cope with the disorder rather than seek treatment from health care providers, in part because of the invasive diagnostic methods. In this study, a diagnostic method with a success rate comparable to that of urodynamic studies is presented. This new method has some advantages over the current one. First, it is noninvasive; data are collected using Doppler ultrasound recording. Second, it requires no special tools and is easy to apply, relatively inexpensive, faster and more hygienic.

Comparison of short-time Fourier transform and Eigenvector MUSIC methods using discrete wavelet transform for diagnosis of atherosclerosis

In this paper, a more effective use of Doppler techniques is presented for the purpose of diagnosing atherosclerosis in its early stages using the carotid artery Doppler signals. The power spectral density (PSD) graphics are obtained by applying the short-time Fourier transform (STFT)-Welch and the Eigenvector MUSIC methods to the discrete wavelet transform (DWT) of Doppler signals. The PSDs for the fourth approximation component (A4) of both methods estimated that the patients with atherosclerosis in its early phase had lower maximum frequency components. On the other hand, the healthy subjects had higher maximum frequency components. The area under the curve (AUC), which belongs to the receiver operating characteristic (ROC) curve for the frequency level of the maximum PSDs of the A4 approximation obtained from the STFT modeling, is computed as 0.97. The AUC for the MUSIC modeling is computed as 0.996. The AUC belonging to the ROC curve for the higher maximum frequency component is computed as 0.87. The AUC belonging to the ROC curve for the test parameter of the frequency level of the maximum PSDs derived from the MUSIC modeling is determined to be 0.882. The results of this study clearly demonstrate that it is possible to distinguish between the healthy people and the patients with atherosclerosis by using the frequency level of the maximum PSDs for the A4 approximation. Furthermore, it is concluded that the power of Eigenvector-MUSIC method in terms of the resolution of the high frequencies is better than that of the STFT methods.