A comparative screening of abiotic stress tolerance in early flowering rice mutants

How rice adapts to high temperatures

High-temperature stress affects crop yields worldwide. Identifying thermotolerant crop varieties and understanding the basis for this thermotolerance would have important implications for agriculture, especially in the face of climate change. Rice (Oryza sativa) varieties have evolved protective strategies to acclimate to high temperature, with different thermotolerance levels. In this review, we examine the morphological and molecular effects of heat on rice in different growth stages and plant organs, including roots, stems, leaves and flowers. We also explore the molecular and morphological differences among thermotolerant rice lines. In addition, some strategies are proposed to screen new rice varieties for thermotolerance, which will contribute to the improvement of rice for agricultural production in the future.

Effect of zinc and iron oxide nanoparticles on plant physiology, seed quality and microbial community structure in a rice-soil-microbial ecosystem

In this study, we assessed the impact of zinc oxide (ZnO) and iron oxide (FeO) (<36 nm) nanoparticles (NPs) as well as their sulphate salt (bulk) counterpart (0, 25, 100 mg/kg) on rice growth and seed quality as well as the microbial community in the rhizosphere environment of rice. During the rice growing season 2021-22, all experiments were conducted in a greenhouse (temperature: day 30 °C; night 20 °C; relative humidity: 70%; light period: 16 h/8 h, day/night) in rice field soil. Results showed that low concentrations of FeO and ZnO NPs (25 mg/kg) promoted rice growth (height (29%, 16%), pigment content (2%, 3%)) and grain quality parameters such as grains per spike (8%, 9%), dry weight of grains (12%, 14%) respectively. As compared to the control group, the Zn (2%) and Fe (5%) accumulations at their respective low concentrations of NP treatments showed stimulation. Interestingly, our results showed that at low concentration of both the NPs the soil microbes had more diversity and richness than those in the bulk treated and control soil group. Although a number of phyla were affected by the presence of NPs, the strongest effects were observed for change in the abundance of the three phyla for Proteobacteria, Actinobacteria, and Planctomycetes. The rhizosphere environment was notably enriched with potential streptomycin producers, carbon and nitrogen fixers, and lignin degraders with regard to functional groups of microorganisms. However, microbial communities mainly responsible for chitin degradation, ammonia oxidation, and nitrite reduction were found to be decreased. The results from this study highlight significant changes in several plant-based endpoints, as well as the rhizosphere soil microorganisms. It further adds information to our understanding of the nanoscale-specific impacts of important micronutrient oxides on both rice and its associated soil microbiome.

OsMLP423 Is a Positive Regulator of Tolerance to Drought and Salt Stresses in Rice

Rice (Oryza sativa L.) is one of the main food crops for human survival, and its yield is often restricted by abiotic stresses. Drought and soil salinity are among the most damaging abiotic stresses affecting today’s agriculture. Given the importance of abscisic acid (ABA) in plant growth and abiotic stress responses, it is very important to identify new genes involved in ABA signal transduction. We screened a drought-inducing gene containing about 158 amino acid residues from the transcriptome library of rice exposed to drought treatment, and we found ABA-related cis-acting elements and multiple drought-stress-related cis-acting elements in its promoter sequence. The results of real-time PCR showed that OsMLP423 was strongly induced by drought and salt stresses. The physiological and biochemical phenotype analysis of transgenic plants confirmed that overexpression of OsMLP423 enhanced the tolerance to drought and salt stresses in rice. The expression of OsMLP423-GFP fusion protein indicated that OsMLP423 was located in both the cell membrane system and nucleus. Compared with the wild type, the overexpressed OsMLP423 showed enhanced sensitivity to ABA. Physiological analyses showed that the overexpression of OsMLP423 may regulate the water loss efficiency and ABA-responsive gene expression of rice plants under drought and salt stresses, and it reduces membrane damage and the accumulation of reactive oxygen species. These results indicate that OsMLP423 is a positive regulator of drought and salinity tolerance in rice, governing the tolerance of rice to abiotic stresses through an ABA-dependent pathway. Therefore, this study provides a new insight into the physiological and molecular mechanisms of OsMLP423-mediated ABA signal transduction participating in drought and salt stresses.

Modulation of Cellular Redox Status and Antioxidant Defense System after Synergistic Application of Zinc Oxide Nanoparticles and Salicylic Acid in Rice (Oryza sativa) Plant under Arsenic Stress

The objective of this research was to determine the effect of zinc oxide nanoparticles (ZnONPs) and/or salicylic acid (SA) under arsenic (As) stress on rice (Oryza sativa). ZnONPs are analyzed for various techniques viz., X-ray diffraction (XRD), Fourier-transform infrared spectroscopy (FTIR), transmission electron microscopy (TEM), and scanning electron microscopy (SEM). All of these tests established that ZnONPs are pure with no internal defects, and can be potentially used in plant applications. Hence, we further investigated for better understanding of the underlying mechanisms and the extent of ZnONPs and SA induced oxidative stress damages. More restricted plant growth, gas exchange indices, significant reduction in the SPAD index and maximum quantum yield (Fv/Fm) and brutal decline in protein content were noticed in As-applied plants. In contrast, foliar fertigation of ZnONPs and/or SA to As-stressed rice plants lessens the oxidative stress, as exposed by subordinate levels of reactive oxygen species (ROS) synthesis. Improved enzymatic activities of catalase (CAT), peroxidase (POX), and superoxide dismutase (SOD), proline and total soluble protein contents under ZnONPs and SA treatment plays an excellent role in the regulation of various transcriptional pathways participated in oxidative stress tolerance. Higher content of nitrogen (N; 13%), phosphorus (P; 10%), potassium (K; 13%), zinc (Zn; 68%), manganese (Mn; 14%), and iron (Fe; 19) in ZnONPs and SA treated plants under As-stress, thus hampered growth and photosynthetic efficiency of rice plants. Our findings suggest that toxicity of As was conquering by the application of ZnONPs and SA in rice plants.

Effect of gamma irradiation on growth, proline content, bioactive compound changes, and biological activity of 5 popular Thai rice cultivars

Gamma irradiation is the technique used to induce plant mutation and it has affected both the physiological and biochemical compounds of the plant. Some new rice lines are also created through the gamma-irradiation technique. We investigated the effect of gamma irradiation on plant growth, volatile compounds, and the biological activity of gamma-irradiated rice extract compared to non-gamma-irradiated rice extract. The results reveal that the gamma-irradiated rice growth was related to the proline content, as the low gamma dose induced rice growth and proline accumulation in gamma-irradiated rice. We induced the bioactive compounds, including the flavonoid content and phenolic content of gamma-irradiated rice, through the low gamma irradiation dose at 60-100 Gy. Interestingly, bioactive compounds were stimulated by a gamma dose similar to that of the biological activity (antioxidant activity and enzyme inhibition) of gamma-irradiated rice. The results suggest that gamma-irradiated rice extract's biological activity was closely related to the flavonoid and phenolic content of rice. We also identified the variety of volatile compounds in gamma-irradiated rice and they were also reported for the biological activity. Our results can generate a new rice line that exhibits high plant growth and is rich with bioactive compounds such as flavonoid and phenolic compounds which are related to the improvement of human health.

Eco-friendly synthesis of phytochemical-capped iron oxide nanoparticles as nano-priming agent for boosting seed germination in rice (Oryza sativa L.)

Recently the applications of engineered nanoparticles in the agricultural sector is increased as nano-pesticides, nano-fertilizers, nanocarrier for macro- or micronutrients, nano-sensors, etc. In this study, biocompatible iron oxide nanoparticles (FeO NPs) have been synthesized through an environment-friendly route using Cassia occidentalis L. flower extract to act as nano-priming agent for promoting germination of Pusa basmati rice seeds. Different characterization methods, viz. X-ray diffraction, particle size analyser, zeta potential and scanning electron microscopy, were used to show efficacious synthesis of FeO NPs capped with phytochemicals. Rice seeds primed with FeO NPs at 20 and 40 mg/L efficiently enhanced germination and seedling vigour compared to ferrous sulphate (FeSO₄) priming and hydro-primed control. The seeds primed with 20 mg/L FeO NPs showed up to 50% stimulation in biophysical parameters such as root length and dry weight. Substantial stimulation of sugar and amylase content was also reported at the same concentration. The antioxidant enzyme activity was significantly increased as compared to FeSO₄ priming and control. Inductively coupled plasma mass spectroscopy (ICP-MS) study was also done for analysis of Fe, Zn, K, Ca, and Mn concentration in seeds. The seed priming technique signifies a comprehensible and innovative approach that could enhance α-amylase activity, iron acquisition, and ROS production, ensuing elevated soluble sugar levels for supporting seedling growth and enhancing seed germination rate, respectively. In this report, phytochemical-capped FeO NPs are presented as a capable nano-priming agent for stimulating the germination of naturally aged rice seeds.

Nanopriming with phytosynthesized zinc oxide nanoparticles for promoting germination and starch metabolism in rice seeds

The application of zinc oxide nanoparticles (ZnO NPs) in agricultural field is emerging and relatively new. In this work, a simple, cost-efficient, non-toxic and eco-friendly method for the green synthesis of ZnO NPs by Senna occidentalis leaf extract has been described. Techniques used to characterize nanoparticles (NPs) were X-ray diffractometer (XRD), UV visible spectroscopy, Particle size analyzer (PSA), Fourier transform infrared spectroscopy (FTIR) and Scanning electron microscopy (SEM). In this study, green synthesized ZnO NPs at 20-40 mg/l solution was used to prime aged seeds of early flowering homozygous mutant (BM6) of Pusa basmati (Oryza sativa), which enhanced germination performance and seedling vigor significantly as compared to zinc sulphate (ZnSO₄) priming and conventional hydropriming. The effect of treatment was analyzed by measuring biophysical and biochemical parameter of germinating rice seeds. The seeds treated with ZnO NPs of 20 mg/l concentration showed more than 50 % stimulation in dry weight, relative water uptake of seeds and radicle length of seedling in comparison to other priming solution and control (hydro-primed). Significant growth was also observed in plumule length and fresh weight of seeds in ZnO NPs at 20 mg/l concentration in comparison to control and other priming treatments. At the same concentration of ZnO NPs, there was 23 % stimulation reported in total soluble sugar content and 45 % stimulation in amylase activity. There was also a substantial increase in antioxidant enzymes i.e. superoxide dismutase (SOD), catalase (CAT) and ascorbate peroxidase (APX) activity. Seed priming represents an innovative user-friendly approach to enhance the germination rate, starch metabolic process and triggered zinc acquisition of rice aged seed as an alternative to the conventional priming method.

A review of CRISPR associated genome engineering: application, advances and future prospects of genome targeting tool for crop improvement

The Cas9 nuclease initiates double-stranded breaks at the target position in DNA, which are repaired by the intracellular restoration pathways to eliminate or insert pieces of DNA. CRISPR-Cas9 is proficient and cost-effective since cutting is guided by a piece of RNA instead of protein. Emphasis on this technology, in contrast with two recognized genome editing platforms (i.e., ZFNs and TALENs), is provided. This review evaluates the benefits of chemically synthesized gRNAs as well as the integration of chemical amendments to improve gene editing efficiencies. CRISPR is an indispensable means in biological investigations and is now as well transforming varied fields of biotechnology and agriculture. Recent advancement in targetable epigenomic-editing tools allows researchers to dispense direct functional and transcriptional significance to locus-explicit chromatin adjustments encompassing gene regulation and editing. An account of diverse sgRNA design tools is provided, principally on their target competence prediction model, off-target recognition algorithm, and generation of instructive annotations. The modern systems that have been utilized to deliver CRISPR-Cas9 in vivo and in vitro for crop improvement viz. nutritional enhancement, production of drought-tolerant and disease-resistant plants, are also highlighted. The conclusion is focused on upcoming directions, biosafety concerns, and expansive prospects of CRISPR technologies.

Plant susceptibility to ozone: A tower of Babel?

In a world with climate change and environmental pollution, modern Biology is concerned with organismic susceptibility. At the same time, policy and decision makers seek information about organismic susceptibility. Therefore, information about organismic susceptibility may have far-reaching implications to the entire biosphere that can extend to several forthcoming generations. Here, we review a sample of approximately 200 published peer-reviewed articles dealing with plant response to ground-level ozone to understand how the information about susceptibility is communicated. A fuzzy and often incorrect terminology was used to describe the responsiveness of plants to ozone. Susceptibility was classified too arbitrarily and this was reflected to the approximately 50 descriptive words that were used to characterize susceptibility. The classification of susceptibility was commonly based on calculated probability (p) value. This practice is inappropriate as p values do not provide any basis for effect or susceptibility magnitude. To bridge the gap between science and policy decision making, classification of susceptibility should be done using alternative approaches, such as effect size estimates in conjunction with multivariate ordination statistics.