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Grajciar L, Heard CJ, Bondarenko AA, Polynski MV, Meeprasert J, Pidko EA, Nachtigall P. Towards operando computational modeling in heterogeneous catalysis. Chem Soc Rev 2018; 47:8307-8348. [PMID: 30204184 PMCID: PMC6240816 DOI: 10.1039/c8cs00398j] [Citation(s) in RCA: 113] [Impact Index Per Article: 18.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2018] [Indexed: 12/19/2022]
Abstract
An increased synergy between experimental and theoretical investigations in heterogeneous catalysis has become apparent during the last decade. Experimental work has extended from ultra-high vacuum and low temperature towards operando conditions. These developments have motivated the computational community to move from standard descriptive computational models, based on inspection of the potential energy surface at 0 K and low reactant concentrations (0 K/UHV model), to more realistic conditions. The transition from 0 K/UHV to operando models has been backed by significant developments in computer hardware and software over the past few decades. New methodological developments, designed to overcome part of the gap between 0 K/UHV and operando conditions, include (i) global optimization techniques, (ii) ab initio constrained thermodynamics, (iii) biased molecular dynamics, (iv) microkinetic models of reaction networks and (v) machine learning approaches. The importance of the transition is highlighted by discussing how the molecular level picture of catalytic sites and the associated reaction mechanisms changes when the chemical environment, pressure and temperature effects are correctly accounted for in molecular simulations. It is the purpose of this review to discuss each method on an equal footing, and to draw connections between methods, particularly where they may be applied in combination.
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Affiliation(s)
- Lukáš Grajciar
- Department of Physical and Macromolecular Chemistry
, Faculty of Science
, Charles University in Prague
,
128 43 Prague 2
, Czech Republic
.
;
;
| | - Christopher J. Heard
- Department of Physical and Macromolecular Chemistry
, Faculty of Science
, Charles University in Prague
,
128 43 Prague 2
, Czech Republic
.
;
;
| | - Anton A. Bondarenko
- TheoMAT group
, ITMO University
,
Lomonosova 9
, St. Petersburg
, 191002
, Russia
| | - Mikhail V. Polynski
- TheoMAT group
, ITMO University
,
Lomonosova 9
, St. Petersburg
, 191002
, Russia
| | - Jittima Meeprasert
- Inorganic Systems Engineering group
, Department of Chemical Engineering
, Faculty of Applied Sciences
, Delft University of Technology
,
Van der Maasweg 9
, 2629 HZ Delft
, The Netherlands
.
| | - Evgeny A. Pidko
- TheoMAT group
, ITMO University
,
Lomonosova 9
, St. Petersburg
, 191002
, Russia
- Inorganic Systems Engineering group
, Department of Chemical Engineering
, Faculty of Applied Sciences
, Delft University of Technology
,
Van der Maasweg 9
, 2629 HZ Delft
, The Netherlands
.
| | - Petr Nachtigall
- Department of Physical and Macromolecular Chemistry
, Faculty of Science
, Charles University in Prague
,
128 43 Prague 2
, Czech Republic
.
;
;
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Sui C, Yuan F, Zhang Z, Wang D, Niu X, Zhu Y. Catalytic activity of Ru/La1.6Ba0.4NiO4 perovskite-like catalyst for NO + CO reaction: Interaction between Ru and La1.6Ba0.4NiO4. MOLECULAR CATALYSIS 2017. [DOI: 10.1016/j.mcat.2017.05.004] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Interaction between Ru and Co3O4 for promoted catalytic decomposition of N2O over the Rux-Co3O4 catalysts. MOLECULAR CATALYSIS 2017. [DOI: 10.1016/j.mcat.2017.03.033] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Broclawik E, Góra-Marek K, Radoń M, Bučko T, Stępniewski A. The dependence on ammonia pretreatment of N-O activation by Co(II) sites in zeolites: a DFT and ab initio molecular dynamics study. J Mol Model 2017; 23:160. [PMID: 28409286 PMCID: PMC5393292 DOI: 10.1007/s00894-017-3322-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2016] [Accepted: 03/17/2017] [Indexed: 11/30/2022]
Abstract
This work is focused on the donor properties of cobalt-exchanged cationic sites in zeolites. It is based on cluster and periodic density functional theory modeling for relevant {[Co(II)(NH3)n]-NO} adducts, where Co(II) means a cobalt cation embedded either in a periodic model of chabasite (CHA) zeolite or in model clusters. NO stretching frequencies were derived from MD trajectories and compared to harmonic values from cluster calculations. By relating calculated NO frequencies to experimental FTIR spectra, it was shown that the forms of {Co(II)-NO} adducts comprising three or four ammonia co-ligands dominate the spectrum taken in ammonia-saturation conditions while forms with two NH3 ligands prevail under intermediate ammonia saturation. Finally, this work confirms the critical dependence of Co(II) activation ability towards NO upon the center donor properties, reinforced by ligation of strong donor ammonia ligands. However, strongly bound ligands appear also to compete with interaction of the center with the electron-rich framework, and a balance must be observed to maintain optimal activation ability. Graphical abstract A snapshot from MD trajectory showing a fragment of periodic framework with twoCo(II)-NO centers, bound to one framework oxygen and strongly coordinating three ammonia ligands with four others forming the second coordination sphere.
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Affiliation(s)
- E Broclawik
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239, Krakow, Poland.
| | - K Góra-Marek
- Faculty of Chemistry, Jagiellonian University, Ingardena 3, 30-060, Krakow, Poland
| | - M Radoń
- Faculty of Chemistry, Jagiellonian University, Ingardena 3, 30-060, Krakow, Poland
| | - T Bučko
- Department of Physical and Theoretical Chemistry, Faculty of Natural Sciences, Comenius University, Mlynská Dolina, SK-84215, Bratislava, Slovakia
| | - A Stępniewski
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239, Krakow, Poland
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Stępniewski A, Radoń M, Góra-Marek K, Broclawik E. Ammonia-modified Co(II) sites in zeolites: spin and electron density redistribution through the Co(II)-NO bond. Phys Chem Chem Phys 2016; 18:3716-29. [PMID: 26761131 DOI: 10.1039/c5cp07452e] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Electronic factors essential for the bonding of a non-innocent NO ligand to ammonia-modified Co(2+) sites in cobalt-exchanged zeolites are examined for small cluster models using DFT and advanced correlated wave function calculations. The analysis of charge transfer processes between the NO ligand and the cobalt center involves two protocols: valence-bond expansion of the multiconfiguration CASSCF wave function (in terms of fragment-localized active orbitals) and spin-resolved natural orbitals for chemical valence (SR-NOCV). Applicability of SR-NOCV analysis to transition metal complexes involving non-innocent fragments is critically assessed and the approach based on the CASSCF wave function turns out to be much more robust and systematic for all studied models. It is shown that the character and direction of electron density redistribution through the Co-N-O bond, quantified by relative share of the Co(II)-NO(0), Co(III)-NO(-), and Co(I)-NO(+) resonance structures in the total wave function, fully rationalize the activation of the N-O bond upon NH3 co-ligation (evidenced by calculated and measured red-shift of the NO stretching frequency and commonly ascribed to enhanced backdonation). The huge red-shift of νN-O is attributed to an effective electron transfer between the ammonia-modified Co(ii) centers and the NO antibonding π*-orbitals (related to the increased share of the Co(III)-NO(-) form). Unexpectedly, the effect is stronger for the singlet complex with three NH3 ligands than for that with five NH3 ligands bound to the cobalt center. Our results also indicate that high-efficiency electron transfers between the Co(ii) center and the NO ligand may be enabled for the selected spin state and disabled for the other spin state of the adduct. This illustrates how the cobalt center may serve to fine-tune the electronic communication between the NO ligand and its binding site.
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Affiliation(s)
- Adam Stępniewski
- Jerzy Haber Institute of Catalysis PAS, Niezapominajek 8, 30-239 Krakow, Poland.
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Sui C, Niu X, Wang Z, Yuan F, Zhu Y. Activity and deactivation of Ru supported on La1.6Sr0.4NiO4 perovskite-like catalysts prepared by different methods for decomposition of N2O. Catal Sci Technol 2016. [DOI: 10.1039/c6cy01920j] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Ru/La1.6Sr0.4NiO4 prepared by the addition of ethylene glycol shows excellent activity for N2O decomposition, even in the presence of O2 and water.
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Affiliation(s)
- Chao Sui
- Key Laboratory of Functional Inorganic Material Chemistry (Heilongjiang University)
- Ministry of Education
- School of Chemistry and Materials
- Heilongjiang University
- Harbin
| | - Xiaoyu Niu
- Key Laboratory of Chemical Engineering Process & Technology for High-efficiency Conversion
- College of Heilongjiang Province
- School of Chemistry and Materials
- Heilongjiang University
- Harbin
| | - Zhuo Wang
- Key Laboratory of Functional Inorganic Material Chemistry (Heilongjiang University)
- Ministry of Education
- School of Chemistry and Materials
- Heilongjiang University
- Harbin
| | - Fulong Yuan
- Key Laboratory of Functional Inorganic Material Chemistry (Heilongjiang University)
- Ministry of Education
- School of Chemistry and Materials
- Heilongjiang University
- Harbin
| | - Yujun Zhu
- Key Laboratory of Functional Inorganic Material Chemistry (Heilongjiang University)
- Ministry of Education
- School of Chemistry and Materials
- Heilongjiang University
- Harbin
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