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Onogi S, Lee SH, Fruehauf KR, Shea KJ. Abiotic Stimuli-Responsive Protein Affinity Reagent for IgG. Biomacromolecules 2021; 22:2641-2648. [PMID: 34009976 DOI: 10.1021/acs.biomac.1c00335] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We describe an approach for the discovery of protein affinity reagents (PARs). Abiotic synthetic hydrogel copolymers can be "tuned" for selective protein capture by the type and ratios of functional monomers included in their polymerization and by the polymerization conditions (i.e., pH). By screening libraries of hydrogel nanoparticles (NPs) containing charged and hydrophobic groups against a protein target (IgG), a stimuli-responsive PAR is selected. The robust carbon backbone synthetic copolymer is rapidly synthesized in the chemistry laboratory from readily available monomers. The production of the PAR does not require living cells and is free from biological contamination. The capture and release of the protein by the copolymer NP is reversible. IgG is sequestered from human serum at pH 6.5 and following a wash step, the purified protein is released by elevating the pH to 7.3. The binding and release of the protein occur without denaturation. The abiotic material functions as a selective PAR for the F(ab')2 domain of IgG for pull-down and immunoprecipitation experiments and for isolation and purification of proteins from complex biological mixtures.
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Affiliation(s)
- Shunsuke Onogi
- Department of Chemistry, University of California, Irvine, Irvine, California 92697, United States.,Tsukuba Research Laboratories, JSR Corporation, Ibaraki 305-0841, Japan
| | - Shih-Hui Lee
- Department of Chemistry, University of California, Irvine, Irvine, California 92697, United States
| | - Krista R Fruehauf
- Department of Chemistry, University of California, Irvine, Irvine, California 92697, United States
| | - Kenneth J Shea
- Department of Chemistry, University of California, Irvine, Irvine, California 92697, United States
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Morifuji Y, Xu J, Karasaki N, Iiyama K, Morokuma D, Hino M, Masuda A, Yano T, Mon H, Kusakabe T, Lee JM. Expression, Purification, and Characterization of Recombinant Human α 1-Antitrypsin Produced Using Silkworm-Baculovirus Expression System. Mol Biotechnol 2018; 60:924-934. [PMID: 30302632 DOI: 10.1007/s12033-018-0127-y] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Human α1-antitrypsin (AAT) is the most abundant serine proteinase inhibitor (serpin) in the human plasma. Commercially available AAT for the medications of deficiency of α1-antitrypsin is mainly purified from human plasma. There is a high demand for a stable and low-cost supply of recombinant AAT (rAAT). In this study, the baculovirus expression vector system using silkworm larvae as host was employed and a large amount of highly active AAT was recovered from the silkworm serum (~ 15 mg/10 ml) with high purity. Both the enzymatic activity and stability of purified rAAT were comparable with those of commercial product. Our results provide an alternative method for mass production of the active rAAT in pharmaceutical use.
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Affiliation(s)
- Yoshiki Morifuji
- Laboratory of Insect Genome Science, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan
| | - Jian Xu
- Laboratory of Insect Genome Science, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan.
| | - Noriko Karasaki
- Laboratory of Insect Genome Science, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan
| | - Kazuhiro Iiyama
- Laboratory of Plant Pathology, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan
| | - Daisuke Morokuma
- Laboratory of Insect Genome Science, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan
| | - Masato Hino
- Laboratory of Insect Genome Science, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan
| | - Akitsu Masuda
- Laboratory of Insect Genome Science, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan
| | - Takumi Yano
- Laboratory of Insect Genome Science, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan
| | - Hiroaki Mon
- Laboratory of Insect Genome Science, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan
| | - Takahiro Kusakabe
- Laboratory of Insect Genome Science, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan
| | - Jae Man Lee
- Laboratory of Insect Genome Science, Kyushu University Graduate School of Bioresource and Bioenvironmental Science, Hakozaki 6-10-1, Higashi-ku, Fukuoka, 812-8581, Japan.
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Fractionation of proteins and carbohydrates from crude microalgae extracts using an ionic liquid based-aqueous two phase system. Sep Purif Technol 2018. [DOI: 10.1016/j.seppur.2018.04.043] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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Domínguez-Puerto R, Valle-Guadarrama S, Guerra-Ramírez D, Hahn-Schlam F. Purification and concentration of cheese whey proteins through aqueous two phase extraction. CYTA - JOURNAL OF FOOD 2018. [DOI: 10.1080/19476337.2017.1420100] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Ricardo Domínguez-Puerto
- Graduate Program, Ingeniería Agrícolay Uso Integral del Agua, Universidad Autónoma Chapingo, Texcoco de Mora, Mexico
| | | | - Diana Guerra-Ramírez
- Departamento de Preparatoria Agrícola, Universidad Autónoma Chapingo, Texcoco de Mora, Mexico
| | - Federico Hahn-Schlam
- Departamento de Irrigación, Universidad Autónoma Chapingo, Texcoco de Mora, Mexico
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Gomes GMS, Bonomo RCF, Veloso CM, da Silva LHM, da Costa Ilhéu Fontan R, Gandolfi ORR, Gonçalves GRF, Sampaio VS. Acquisition of Water Solubility Diagrams in Ternary Systems (AOT/Organic Solvent/Alcohol) and Extraction of α-Lactalbumin Using Reverse Micellar Systems. J SURFACTANTS DETERG 2017. [DOI: 10.1007/s11743-017-1960-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Freire LAC, Pereira CG. Partition of α-lactoalbumin and β-lactoglobulin from goat milk whey utilizing aqueous biphasic systems. SEP SCI TECHNOL 2015. [DOI: 10.1080/01496395.2015.1093503] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Costa ARD, Coimbra JSDR, Ferreira LA, Marcos JC, Santos IJB, Saldaña MD, Teixeira JAC. Partitioning of bovine lactoferrin in aqueous two-phase system containing poly(ethylene glycol) and sodium citrate. FOOD AND BIOPRODUCTS PROCESSING 2015. [DOI: 10.1016/j.fbp.2015.04.002] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Sivakumar K, Iyyaswami R. Recovery and Partial Purification of Bovine α-Lactalbumin from Whey Using PEG 1000 – Trisdoium Citrate Systems. SEP SCI TECHNOL 2014. [DOI: 10.1080/01496395.2014.964729] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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9
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Emerging technologies for the integration and intensification of downstream bioprocesses. ACTA ACUST UNITED AC 2013. [DOI: 10.4155/pbp.13.55] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Ketnawa S, Benjakul S, Ling TC, Martínez-Alvarez O, Rawdkuen S. Enhanced recovery of alkaline protease from fish viscera by phase partitioning and its application. Chem Cent J 2013; 7:79. [PMID: 23631530 PMCID: PMC3653721 DOI: 10.1186/1752-153x-7-79] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2012] [Accepted: 04/24/2013] [Indexed: 11/10/2022] Open
Abstract
Background Too many different protein and enzyme purification techniques have been reported, especially, chromatographic techniques. Apart from low recovery, these multi-step methods are complicated, time consuming, high operating cost. So, alternative beneficially methods are still required. Since, the outstanding advantages of aqueous two phase system (ATPS) such as simple, low cost, high recovery and scalable, ATPS have been used to purify various enzymes. To improve purification efficiency, parameters affected to enzyme recovery or purity was investigated. The objectives of the present study were to optimize of alkaline protease recovery from giant catfish fish viscera by using ATPS and to study of hydrolytic patterns against gelatin. Results Using 70% (w/w) crude enzyme extract (CE) in system (15% PEG2000-15% sodium citrate) provided the highest recovery, PF and KE. At unmodified pH (8.5) gave the best recovery and PF with compare to other pHs of the system. The addition of 1% (w/w) NaCl showed the recovery (64.18%), 3.33-fold and 15.09 of KE compared to the system without NaCl. After addition of 10% (w/w) sodium citrate in the second ATPS cycle, the highest protease recovery (365.53%) and PF (11.60-fold) were obtained. Thus, the top phase from the system was subjected to further studied. The protein bands with molecular weights (MWs) of 20, 24, 27, 36, 94 and 130 kDa appeared on the protein stained gel and also exhibited clear zone on casein-substrate gel electrophoresis. The β, α1, α2 of skin gelatin extensively degraded into small molecules when treated with 10 units of the extracted alkaline protease compared to those of the level of 0.21 units of Flavourzyme. Conclusions Repetitive ATPS is the alternative strategy to increase both recovery and purity of the alkaline protease from farmed giant catfish viscera. Extracted alkaline protease exposed very high effectiveness in gelatin hydrolysis. It is suggested that the alkaline protease from this fish viscera can further be used in protein hydrolysate production.
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Affiliation(s)
- Sunantha Ketnawa
- Program of Food Technology, School of Agro-Industry, Mae Fah Luang University, Chiang Rai 57100, Thailand.
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Liquid-Liquid Equilibrium Data for the Ionic Liquid N-Ethyl-Pyridinium Bromide with Several Sodium Salts and Potassium Salts. J CHEM-NY 2013. [DOI: 10.1155/2013/857272] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The liquid-liquid equilibrium (LLE) data for systems containing N-ethyl-pyridinium bromide ([EPy]Br), salt (Na2HPO4,K2HPO4,K2SO4,C4O6H4KNa), and water have been measured experimentally atT=298.15 K and the formations of these four aqueous two-phase systems (ATPSs) have been discussed. Also, the effective excluded volume (EEV) values obtained from the binodal models for the four systems were determined and the salting-out abilities of different salts follow the order ofK2SO4>K2HPO4>Na2HPO4>C4O6H4KNa. The solubility data were correlated by the Merchuk and other equations while the tie-line data by the Othmer-Tobias, Bancroft, two-parameter, and Setschenow-type equations. The correlation coefficients evidenced that experimental data fitted well to all these equations. These four salts were proved successfully to form ATPSs with N-ethyl-pyridinium bromide, making a significant contribution to the further study of this kind of ATPS.
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Nemati-Kande E, Shekaari H. Liquid–Liquid Equilibria of Some Aliphatic Alcohols + Disodium Hydrogen Citrate + Water Ternary Systems at 298.15 K. J SOLUTION CHEM 2012. [DOI: 10.1007/s10953-012-9893-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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13
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Mageste AB, Senra TDA, da Silva MCH, Bonomo RCF, da Silva LHM. Thermodynamics and optimization of norbixin transfer processes in aqueous biphasic systems formed by polymers and organic salts. Sep Purif Technol 2012. [DOI: 10.1016/j.seppur.2012.06.012] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Pei Y, Li L, Li Z, Wu C, Wang J. Partitioning Behavior of Wastewater Proteins in Some Ionic Liquids-Based Aqueous Two-Phase Systems. SEP SCI TECHNOL 2012. [DOI: 10.1080/01496395.2011.609241] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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Alcântara LAP, Minim LA, Minim VPR, Bonomo RCF, da Silva LHM, da Silva MDCH. Application of the response surface methodology for optimization of whey protein partitioning in PEG/phosphate aqueous two-phase system. J Chromatogr B Analyt Technol Biomed Life Sci 2011; 879:1881-5. [DOI: 10.1016/j.jchromb.2011.05.007] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2011] [Revised: 05/02/2011] [Accepted: 05/04/2011] [Indexed: 11/26/2022]
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Partitioning of α-lactalbumin and β-lactoglobulin in aqueous two-phase systems of polyvinylpyrrolidone and potassium phosphate. J Chromatogr B Analyt Technol Biomed Life Sci 2011; 879:721-6. [DOI: 10.1016/j.jchromb.2011.02.007] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2010] [Revised: 02/05/2011] [Accepted: 02/05/2011] [Indexed: 11/21/2022]
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17
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Grulich M, Maršálek J, Kyslík P, Štěpánek V, Kotik M. Production, enrichment and immobilization of a metagenome-derived epoxide hydrolase. Process Biochem 2011. [DOI: 10.1016/j.procbio.2010.10.004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Rao JR, Nair BU. Novel approach towards recovery of glycosaminoglycans from tannery wastewater. BIORESOURCE TECHNOLOGY 2011; 102:872-878. [PMID: 20889335 DOI: 10.1016/j.biortech.2010.09.013] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2010] [Revised: 09/02/2010] [Accepted: 09/04/2010] [Indexed: 05/29/2023]
Abstract
Poly ethylene glycol (PEG)-poly acrylic acid (PAA) based aqueous two-phase system (ATPS) was selected as a practical model to recover glycosaminoglycans (GAGs) from tannery wastewater. The influence of PEG molecular weight, tie line length (TLL), pH, temperature and NaCl concentration on the partition coefficient of glycosaminoglycans from tannery wastewater was studied. Partition coefficient of glycosaminoglycan decreases on increase of PEG molecular weight, NaCl concentration and temperature, whereas it increases with increase of pH. In the PEG-rich phase, increased partitioning of GAGs was observed with increase in TLL. The partitioning of GAGs was better in PEG 4000 at pH 8.0, 20 °C with a yield of 91.50%. This study demonstrates the potential application of ATPS processes for the recovery of GAGs from complex biological suspensions.
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Affiliation(s)
- Jonnalagadda Raghava Rao
- Chemical Laboratory, Central Leather Research Institute, Council of Scientific and Industrial Research, Adyar, Chennai 600 020, India.
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Nascimento KS, Azevedo AM, Cavada BS, Aires-Barros MR. Partitioning ofCanavalia brasiliensisLectin in Polyethylene Glycol – Sodium Citrate Aqueous Two-Phase Systems. SEP SCI TECHNOL 2010. [DOI: 10.1080/01496395.2010.507446] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Tubio G, Picó GA, Nerli BB. Extraction of trypsin from bovine pancreas by applying polyethyleneglycol/sodium citrate aqueous two-phase systems. J Chromatogr B Analyt Technol Biomed Life Sci 2008; 877:115-20. [PMID: 19109075 DOI: 10.1016/j.jchromb.2008.11.016] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2008] [Revised: 11/04/2008] [Accepted: 11/09/2008] [Indexed: 10/21/2022]
Abstract
The goal of this work was to determine the optimal conditions for separating trypsin (TRP) from alpha-chymotrypsin (ChTRP) and to apply them for trypsin purification from bovine pancreas by liquid-liquid extraction with polyethyleneglycol/sodium citrate (PEG/NaCit) aqueous two-phase systems. Partitioning behaviours of TRP and ChTRP are demonstrated to be very sensitive to variables such as PEG molecular weight, pH and tie line length. Aqueous two-phase systems (ATPSs) formed by PEG of MW 3350 and NaCit pH 5.20 showed the best separation capability. The addition of NaCl up to a final concentration of 7% (w/w) and the decrease of top/bottom volume ratio to 0.1 led to the recovery of 60% of pancreatic TRP in a concentrated form in the top phase with a 3-fold purification. Biomass presence up to 25% (w/w) of the total system mass did not affect significantly yield and purification parameters.
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Affiliation(s)
- Gisela Tubio
- Chemical Physics Department, CONICET, FonCyT, Faculty of Biochemical and Pharmaceutical Sciences, National University of Rosario, Rosario, Argentina
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Kumpalume P, LePage C, Dalton J. Designing a new manufacturing processes for plasma proteins to maximise alpha-1 antitrypsin recovery. FOOD AND BIOPRODUCTS PROCESSING 2008. [DOI: 10.1016/j.fbp.2007.10.006] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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