Potential impact of biochar types and microbial inoculants on growth of onion plant in differently textured and phosphorus limited soils

Phytoremediation of contaminated sediment combined with biochar: Feasibility, challenges and perspectives

The accumulation of contaminants in sediments is accelerated by human activities and poses a major threat to ecosystems and human health. In recent years, various remediation techniques have been developed for contaminated sediments. In this review, a bibliometric analysis of papers on sediment remediation indexed in the WOS database between 2009 and 2023 was conducted using VOSviewer. We describe the development of biochar and plants for sediment contaminant removal. However, the single processes of biochar remediation and phytoremediation can be impeded by (i) low efficiency, (ii) poor tolerance of plants towards pollutants, (iii) difficulty in biochar to degrade pollutants, and (iv) biochar aging causing secondary pollution. Fortunately, combination remediation, realized through the combination of biochar and plants, can overcome the shortcomings of their individual applications. Therefore, we suggest that the remediation of contaminants in sediments can be accomplished by combining biochar with macrophytes and considering multiple limiting factors. Here, we explore the challenges that co-remediation with biochar and macrophytes will face in achieving efficient and sustainable sediment remediation, including complex sediment environments, interaction mechanisms of biochar-macrophyte-microorganisms, emerging pollutants, and integrated life cycle assessments, which can provide references for combined biochar and plant remediation of sediments in the future.

Waterlogging stress alters the structure of sugar beet rhizosphere microbial community structure and recruiting potentially beneficial bacterial

Waterlogging has been shown to have a significant inhibitory effect on plant growth. However, the response mechanisms of the soil environment of sugar beet seedlings under waterlogging conditions still need to be fully understood. This study aimed to investigate the effects of waterlogging treatments on the content of effective nutrients and the microbial communities in the rhizosphere and non-rhizosphere using high-throughput sequencing. We set up waterlogging and non-waterlogging treatments, sampled sugar beet seedlings after 10 days of waterlogging, determined the effective soil nutrients in the rhizosphere and non-rhizosphere of the plants, and analyzed the differences in microbial diversity at ten days of waterlogging. The results showed that waterlogging significantly affected available potassium (AK) content. The Ak content of waterlogged soil was significantly higher than that of non-waterlogged soil. Waterlogging caused no significant difference in available nitrogen (AN) content and pH. Moreover, the plant growth-promoting bacteria Pseudomonas was significantly enriched in sugar beet waterlogged rhizospheres compared with the non-waterlogged ones. Similarly, the harmful fungi Gibellulopsis and Alternaria were enriched in sugar beet non-waterlogged rhizosphere. The network analysis revealed that waterlogging built a less complex root-microbial network than non-waterlogging. These findings implied that sugar beets subjected to waterlogging stress were enriched with beneficial microorganisms in the rhizosphere, potentially alleviating the stress.

Plant Microbiome Engineering: Hopes or Hypes

Rhizosphere microbiome is a dynamic and complex zone of microbial communities. This complex plant-associated microbial community, usually regarded as the plant's second genome, plays a crucial role in plant health. It is unquestioned that plant microbiome collectively contributes to plant growth and fitness. It also provides a safeguard from plant pathogens, and induces tolerance in the host against abiotic stressors. The revolution in omics, gene-editing and sequencing tools have somehow led to unravel the compositions and latent interactions between plants and microbes. Similarly, besides standard practices, many biotechnological, (bio)chemical and ecological methods have also been proposed. Such platforms have been solely dedicated to engineer the complex microbiome by untangling the potential barriers, and to achieve better agriculture output. Yet, several limitations, for example, the biological obstacles, abiotic constraints and molecular tools that capably impact plant microbiome engineering and functionality, remained unaddressed problems. In this review, we provide a holistic overview of plant microbiome composition, complexities, and major challenges in plant microbiome engineering. Then, we unearthed all inevitable abiotic factors that serve as bottlenecks by discouraging plant microbiome engineering and functionality. Lastly, by exploring the inherent role of micro/macrofauna, we propose economic and eco-friendly strategies that could be harnessed sustainably and biotechnologically for resilient plant microbiome engineering.

New opportunities in plant microbiome engineering for increasing agricultural sustainability under stressful conditions

Plant microbiome (or phytomicrobiome) engineering (PME) is an anticipated untapped alternative strategy that could be exploited for plant growth, health and productivity under different environmental conditions. It has been proven that the phytomicrobiome has crucial contributions to plant health, pathogen control and tolerance under drastic environmental (a)biotic constraints. Consistent with plant health and safety, in this article we address the fundamental role of plant microbiome and its insights in plant health and productivity. We also explore the potential of plant microbiome under environmental restrictions and the proposition of improving microbial functions that can be supportive for better plant growth and production. Understanding the crucial role of plant associated microbial communities, we propose how the associated microbial actions could be enhanced to improve plant growth-promoting mechanisms, with a particular emphasis on plant beneficial fungi. Additionally, we suggest the possible plant strategies to adapt to a harsh environment by manipulating plant microbiomes. However, our current understanding of the microbiome is still in its infancy, and the major perturbations, such as anthropocentric actions, are not fully understood. Therefore, this work highlights the importance of manipulating the beneficial plant microbiome to create more sustainable agriculture, particularly under different environmental stressors.

Harnessing microbial multitrophic interactions for rhizosphere microbiome engineering

The rhizosphere is a narrow and dynamic region of plant root-soil interfaces, and it's considered one of the most intricate and functionally active ecosystems on the Earth, which boosts plant health and alleviates the impact of biotic and abiotic stresses. Improving the key functions of the microbiome via engineering the rhizosphere microbiome is an emerging tool for improving plant growth, resilience, and soil-borne diseases. Recently, the advent of omics tools, gene-editing techniques, and sequencing technology has allowed us to unravel the entangled webs of plant-microbes interactions, enhancing plant fitness and tolerance to biotic and abiotic challenges. Plants secrete signaling compounds with low molecular weight into the rhizosphere, that engage various species to generate a massive deep complex array. The underlying principle governing the multitrophic interactions of the rhizosphere microbiome is yet unknown, however, some efforts have been made for disease management and agricultural sustainability. This review discussed the intra- and inter- microbe-microbe and microbe-animal interactions and their multifunctional roles in rhizosphere microbiome engineering for plant health and soil-borne disease management. Simultaneously, it investigates the significant impact of immunity utilizing PGPR and cover crop strategy in increasing rhizosphere microbiome functions for plant development and protection using omics techniques. The ecological engineering of rhizosphere plant interactions could be used as a potential alternative technology for plant growth improvement, sustainable disease control management, and increased production of economically significant crops.

Production of pine sawdust biochar supporting phosphate-solubilizing bacteria as an alternative bioinoculant in Allium cepa L., culture

We produced and characterised biochar made from Caribbean pine sawdust as raw material. The biochar (BC₅₀₀) was used as biocompatible support to co-inoculate phosphate solubilizing bacteria (PSB) (BC₅₀₀/PSB) on Allium cepa L., plants at a greenhouse scale for four months. The three biomaterials study included proximate analysis, elemental analysis, aromaticity analysis, scanning electron microscopy, Fourier transform infrared spectroscopy (FTIR), adsorption studies at different pH and PSB stability as a function of time. The results indicated that BC₅₀₀ is suitable as organic support or solid matrix to maintain the viability of PSB able to solubilise P from phosphate rock (PR). The biofertilizer (BC₅₀₀/PSB) allows increasing germination, seedling growth, nutrient assimilation, and growth of Allium cepa L., because PSB immobilised on BC₅₀₀ promoted nutrient mobilisation, particularly P, during cultivation of Allium cepa L., at pots scale. The two treatments to evaluate the biofertilizer (BC₅₀₀/PSB) showed the highest concentrations of total P with 1.25 ± 0.13 and 1.38 ± 0.14 mg bulb^-1 in A. cepa L. This work presents the benefits of a new product based on bacteria naturally associated with onion and an organic material (BC₅₀₀) serving as a bacterial carrier that increases the adsorption area of highly reactive nutrients, reducing their leaching or precipitation with other nutrients and fixation to the solid matrix of the soil.

Effects of Biochar on Biointensive Horticultural Crops and Its Economic Viability in the Mediterranean Climate

The effects of biochar on different horticultural crops (lettuce, tomato, sweet pepper, and radish) were evaluated in the Mediterranean climate. Biochar was produced by pyrolysis of Pinus pinaster wood chips at 550 °C and used at 1 (B1) and 2 (B2) kg/m2 application rates on six 3.5 m2 plots in each treatment, with two control plots (B0). No fertilizer was used. Treatment B1 led to a significant increase (p < 0.01) of 35.4%, 98.1%, 28.4%, and 35.2% in the mean fresh weight of radishes, lettuce, tomatoes, and sweet peppers, respectively. Treatment B2 resulted in an improvement of 70.7% in radishes, 126.1% in lettuce, 38.4% in tomatoes, and 95.0% in sweet peppers (p < 0.01). Significant differences between treatments B1 and B2 were observed in the radish, tomato, and sweet pepper crops but not in lettuce. The profitability of biochar application to these crops was studied by considering a biochar price of 800 EUR/t and applying a CO2 fixation subsidy, assuming the updated February 2022 price (90 EUR/t). In lettuce, tomato, and sweet pepper crops, the investment payback period was approximately one year. Application of biochar generated economic benefit either from the first harvest or in the second year. In radish, this period was longer than two years; however, an increase in the annual frequency of cultivation should be studied to optimize the benefit. The dose that provided the greatest benefit was B1 (for all crops, except for sweet pepper). Biochar considerably improved fruit and vegetable yield under the Mediterranean climate; however, further studies are needed to assess the effects of biochar on soil properties and yield to estimate long-term environmental and economic benefits.

Soil Amendment Using Biochar and Application of K-Humate Enhance the Growth, Productivity, and Nutritional Value of Onion (Allium cepa L.) under Deficit Irrigation Conditions

Water scarcity, due to physical shortage or inadequate access, is a major global challenge that severely affects agricultural productivity and sustainability. Deficit irrigation is a promising strategy to overcome water scarcity, particularly in arid and semiarid regions with limited freshwater resources. However, precise application of deficit irrigation requires a better understanding of the plant response to water/drought stress. In the current study, we investigated the potential impacts of biochar-based soil amendment and foliar potassium-humate application (separately or their combination) on the growth, productivity, and nutritional value of onion (Allium cepa L.) under deficient irrigation conditions in two separate field trials during the 2018/2019 and 2019/2020 seasons. Our findings showed that deficit irrigation negatively affected onion resilience to drought stress. However, these harmful effects were diminished after soil amendment using biochar, K-humate foliar application, or their combination. Briefly, integrated biochar and K-humate application increased onion growth, boosted the content of the photosynthetic pigments, enhanced the water relations, and increased the yield traits of deficient irrigation onion plants. Moreover, it improved the biochemical response, enhanced the activities of antioxidant enzymes, and enriched the nutrient value of deficiently irrigated onion plants. Collectively, these findings highlight the potential utilization of biochar and K-humate as sustainable eco-friendly strategies to improve onion resilience to deficit irrigation.

Profiling of Plant Growth-Promoting Metabolites by Phosphate-Solubilizing Bacteria in Maize Rhizosphere

Microbial treatment has recently been attracting attention as a sustainable agricultural strategy addressing the current problems caused by unreasonable agricultural practices. However, the mechanism through which microbial inoculants promote plant growth is not well understood. In this study, two phosphate-solubilizing bacteria (PSB) were screened, and their growth-promoting abilities were explored. At day 7 (D7), the lengths of the root and sprout with three microbial treatments, M16, M44, and the combination of M16 and M44 (Com), were significantly greater than those with the non-microbial control, with mean values of 9.08 and 4.73, 7.15 and 4.83, and 13.98 and 5.68 cm, respectively. At day 14 (D14), M16, M44, and Com significantly increased not only the length of the root and sprout but also the underground and aboveground biomass. Differential metabolites were identified, and various amino acids, amino acid derivatives, and other plant growth-regulating molecules were significantly enhanced by the three microbial treatments. The profiling of key metabolites associated with plant growth in different microbial treatments showed consistent results with their performances in the germination experiment, which revealed the metabolic mechanism of plant growth-promoting processes mediated by screened PSB. This study provides a theoretical basis for the application of PSB in sustainable agriculture.

Evaluating the Effects of Biochar with Farmyard Manure under Optimal Mineral Fertilizing on Tomato Growth, Soil Organic C and Biochemical Quality in a Low Fertility Soil

Biochar amendments are widely recognized to improve crop productivity and soil biogeochemical quality, however, their effects on vegetable crops are less studied. This pot study investigated the effects of cotton stick, corncob and rice straw biochars alone and with farmyard manure (FYM) on tomato growth, soil physico–chemical and biological characteristics, soil organic carbon (SOC) content and amount of soil nutrients under recommended mineral fertilizer conditions in a nutrient-depleted alkaline soil. Biochars were applied at 0, 1.5 and 3% (w/w, basis) rates and FYM was added at 0 and 30 t ha−1 rates. Biochars were developed at 450 °C pyrolysis temperature and varied in total organic C, nitrogen (N), phosphorus (P) and potassium (K) contents. The results showed that biochars, their amounts and FYM significantly improved tomato growth which varied strongly among the biochar types, amounts and FYM. With FYM, the addition of 3% corncob biochar resulted in the highest total chlorophyll contents (9.55 ug g−1), shoot (76.1 cm) and root lengths (44.7 cm), and biomass production. Biochars with and without FYM significantly increased soil pH, electrical conductivity (EC) and cation exchange capacity (CEC). The soil basal respiration increased with biochar for all biochars but not consistently after FYM addition. The water-extractable organic C (WEOC) and soil organic C (SOC) contents increased significantly with biochar amount and FYM, with the highest SOC found in the soil that received 3% corncob biochar with FYM. Microbial biomass C (MBC), N (MBN) and P (MBP) were the highest in corncob biochar treated soils followed by cotton stick and rice straw biochars. The addition of 3% biochars along with FYM also showed significant positive effects on soil mineral N, P and K contents. The addition of 3% corncob biochar with and without FYM always resulted in higher soil N, P and K contents at the 3% rate. The results further revealed that the positive effects of biochars on above-ground plant responses were primarily due to the improvements in below-ground soil properties, nutrients’ availability and SOC; however, these effects varied strongly between biochar types. Our study concludes that various biochars can enhance tomato production, soil biochemical quality and SOC in nutrient poor soil under greenhouse conditions. However, we emphasize that these findings need further investigations using long-term studies before adopting biochar for sustainable vegetable production systems.

Mitigation of Heat Stress in Solanum lycopersicum L. by ACC-deaminase and Exopolysaccharide Producing Bacillus cereus: Effects on Biochemical Profiling

Soil microorganisms might be assessed for their capabilities of plant growth promotion in order to identify heat tolerant strategies for crop production. The planned study was conducted to determine the potential of heat tolerant plant growth promoting rhizobacteria (PGPR) in mitigating heat stress effects in tomato. Bacillus cereus was evaluated for plant growth promoting activities and assessed for 1-aminocyclopropane-1-carboxylate (ACC-deaminase) (0.76–C0.9 μM/mg protein/h), and exopolysaccharide (0.66–C0.91 mg/mL) under normal and heat stressed conditions. Plant growth regulators were evaluated through High Performance Liquid Chromatography. Bacterial inoculation effects on important physiological and biochemical parameters were evaluated under normal and heat stressed conditions in growth chamber. The morphological-physiological traits significantly revealed drastic effects on both of un-inoculated tomato varieties under heat stress conditions. Bacterial augmentation significantly promoted shoot, root length, leaf surface area, fresh and dry weight. Heat stress enhanced extracellular polymeric substances (EPS) production and cleavage of ACC into a-ketobutyrate and ammonia due to ACC-deaminase producing bacteria that significantly reduced the adverse effects of heat on tomato growth. In conclusion, the applied plant growth promoting rhizobacteria (PGPR) bacterial strain proved as potential candidate for improving tomato crop growing under heat stressed conditions. However, it is highly suggested to validate the current results by conducting field trials.