Changes in the composition of the soil seed bank of grassland after giant ragweed (Ambrosia trifida L.) invasion

Chromosome-level genome of Ambrosia trifida provides insights into adaptation and the evolution of pollen allergens

Ambrosia trifida (giant ragweed) is an invasive plant that can cause serious damage to natural ecosystems and severe respiratory allergies. However, the genomic basis of invasive adaptation and pollen allergens in Ambrosia species remain largely unknown. Here, we present a 1.66 Gb chromosome-scale reference genome for giant ragweed and identified multiple types of genome duplications, which are responsible for its rapid environmental adaptation and pollen development. The largest copies number and species-specific expansions of resistance-related gene families compared to Heliantheae alliance might contribute to resist stresses, pathogens and rapid adaptation. To extend the knowledge of evolutionary process of allergic pollen proteins, we predicted 26 and 168 potential pollen allergen candidates for giant ragweed and other Asteraceae plant species by combining machine learning and identity screening. Interestingly, we observed a specific tandemly repeated array for potential allergenic pectate lyases among Ambrosia species. Rapid evolutionary rates on putative pectate lyase allergens may imply a crucial role of nonsynonymous mutations on amino acid residues for plant biological function and allergenicity. Altogether, this study provides insight into the molecular ecological adaptation and putative pollen allergens prediction that will be helpful in promoting invasion genomic research and evolution of putative pollen allergy in giant ragweed.

Spatial variation of soil seed banks along a gradient of anthropogenic disturbances in tropical forests on coral islands

Poor regeneration of natural vegetation is a major factor contributing to the degradation of tropical coral islands. Soil seed banks (SSB) are important for maintaining the resilience of plant communities. However, the community characteristics and spatial distribution of SSBs and the controlling factors along human disturbance on coral islands are unclear. To fill this gap, we measured the community structure and spatial distributions of forest SSBs on three coral islands in the South China Sea, with varying degrees of human disturbance. The results showed that strong human disturbance increased the diversity, richness, and density of SSBs, as well as increased the richness of invasive species. With increased human disturbance, the heterogeneity pattern of SSBs spatial distribution changed from difference between forest east and west to forest center and edge. The similarity between the SSBs and above-ground vegetation also increased, and the distribution of invasive species extended from the edge to the central area of the forests, demonstrating that human disturbance limited the outward dispersal of seeds of resident species but increased the inward dispersal of seeds of invasive species. Interaction between soil properties, plant characteristics, and human disturbance explained 23-45% of the spatial variation of forest SSBs on the coral islands. However, human disturbance reduced the correlations of plant communities and spatial distribution of SSBs with soil factors (i.e., available phosphorus and total nitrogen) and increased the correlations of the community characteristics of SSB with landscape heterogeneity index, road distance, and shrub and litter cover. Resident seed dispersal on tropical coral islands might be enhanced by reducing building height, constructing buildings in down-wind locations, and preserving corridors that support animal movement among forest fragments.

Role of priority effects in invasive plant species management: Early arrival of native seeds guarantees the containment of invasion by Giant ragweed

Empirical evidence shows that early arrival of native species, which induces the priority effects, can contribute to invasive plant species containment. However, more systematic studies are required to test the applied relevance of the priority effect. This study therefore aimed at testing the priority effects generated by different sowing times of seeds of nine native species on one target invasive plant species, that is, Giant ragweed (Ambrosia trifida). This study hypothesized that, when sown earlier, some native species will be able to substantially contain A. trifida through resource preemption. An additive competition design was used to test the competitive effects of native species on A. trifida. Depending on the sowing times of native and invasive plant species, three priority treatments were conducted: all species sown at the same time (T1); native species sown 3 weeks before A. trifida (T2); and native species sown 6 weeks before A. trifida (T3). Priority effects created by all nine native species significantly affected the invasibility of A. trifida. The average value of the relative competition index (RCI_avg) of A. trifida was the highest when native seeds were sown 6 weeks early and decreased with decreasing early sowing time of native plants. The species identity effect was not significant on RCI_avg if natives were sown at the same time or 3 weeks earlier than A. trifida invasion, but it was significant (p = .0123) if they were sown 6 weeks earlier than A. trifida. Synthesis and applications. The findings of this study clearly show that native species, when sown early, provide strong competition and resist invasion through prior utilization of resources. The consideration of this knowledge might improve A. trifida invasion management practices.