A theoretical study of hydrogen-bonded molecular clusters of sulfuric acid and organic acids with amides

Interaction between hydroxymethanesulfonic acid and several organic compounds and its atmospheric significance

The interactions of the micro-mechanism of hydroxymethanesulfonic acid (HMSA) with the typical small organic molecule in atmospheric (X = methanol, formaldehyde, formic acid, methyl formate, dimethyl ether, acetone) has been investigated by density functional theory (DFT), quantum theory of atoms in molecules (QTAIM), Generalized Kohn-Sham Enery Decomposition Analysis (GKS-EDA) and the atmospheric clusters dynamic code (ACDC). The results of DFT show that the stable six- to eight-membered ring structures are easily formed in HMSA-X clusters. According to the topological analysis results of the AIM theory and the IRI method, a strong hydrogen bonding interaction is present in the complex. GKS-EDA results show that electrostatic energy is the main contributor to the interaction energy as it accounts for 51 %-55 % of the total attraction energy. The evaporation rates of HMSA-HMSA and HMSA-HCOOH clusters were much lower than those of the other HMSA complexes. In addition, the Gibbs energy of formation (ΔG) of HMSA-X dimers is investigated under atmosphere temperature T = 217-298 K and p = 0.19-1.0 atm, the ΔG decreased with decreasing of the atmosphere temperature and increased with the decrease of atmospheric pressure, indicating that the low temperature and high pressure may significantly facilitate to the formation of dimers.

Roles of Amides on the Formation of Atmospheric HONO and the Nucleation of Nitric Acid Hydrates

Nitrous acid (HONO) is hazardous to the human respiratory system, and the hydrolysis of NO₂ is the source of HONO. Hence, the investigation on the removal and transformation of HONO is urgently established. The effects of amide on the mechanism and kinetics of the formation of HONO with acetamide, formamide, methylformamide, urea, and its clusters of the catalyst were studied theoretically. The results show that amide and its small clusters reduce the energy barrier, the substituent improves the catalytic efficiency, and the catalytic effect order is dimer > monohydrate > monomer. Meanwhile, the clusters composed of nitric acid (HNO₃), amides, and 1-6 water molecules were investigated in the amide-assisted nitrogen dioxide (NO₂) hydrolysis reaction after HONO decomposes by combining the system sampling technique and density functional theory. The study on thermodynamics, intermolecular forces, optics properties of the clusters, as well as the influence of humidity, temperature, atmospheric pressure, and altitude shows that amide molecules promote the clustering and enhance the optical properties. The substituent facilitates the clustering of amide and nitric acid hydrate and lowers the humidity sensitivity of the clusters. The findings will help to control the atmospheric aerosol particle and then reduce the harm of poisonous organic chemicals on human health.

Formation mechanism of typical aromatic sulfuric anhydrides and their potential role in atmospheric nucleation process

Sulfuric anhydrides, generated from the cycloaddition reaction of SO₃ with carboxylic acids, have been revealed to be potential participants in the nucleation process of new particle formation (NPF). Hence the reaction mechanisms of typical aromatic acids (benzoic acid (BA), phenylacetic acid (PAA), phthalic acid (PA), isophthalic acid (mPA), and terephthalic acid (PTA)) with SO₃ to generate the corresponding aromatic sulfuric anhydrides were investigated by density functional theory calculations at the level of M06-2X/6-311++G(3df,3pd). As a result, these reactions were found to be feasible in the gas phase with barriers of 0.34, 0.30, 0.18, 0.08 and 0.12 kcal/mol to generate corresponding aromatic sulfuric anhydrides, respectively. The thermodynamic stabilities of clusters containing aromatic sulfuric anhydrides and atmospheric nucleation precursors (sulfuric acid, ammonia and dimethylamine) were further analyzed to identify the potential role of aromatic sulfuric anhydrides in NPF. As the thermodynamic stability of a cluster depends on both the number and strength of hydrogen bonds, the greater stability of the interactions between atmospheric nucleation precursors and aromatic sulfuric anhydrides than with aromatic acids make aromatic sulfuric anhydrides potential participators in the nucleation process of NPF. Moreover, compared with BA, the addition of a -CH₂- functional group in PAA has little influence on the reaction barrier with SO₃ but an inhibitive effect on the thermodynamic stability of clusters. The position of the two -COOH functional groups in PA, mPA and PTA does not have a consistent impact on the reaction barrier with SO₃ or the thermodynamic stability.

Computational chemistry of cluster: Understanding the mechanism of atmospheric new particle formation at the molecular level

New particle formation (NPF), which exerts significant influence over human health and global climate, has been a hot topic and rapidly expands field of research in the environmental and atmospheric chemistry recent years. Generally, NPF contains two processes: formation of critical nucleus and further growth of the nucleus. However, due to the complexity of the atmospheric nucleation, which is a multicomponent process, formation of critical clusters as well as their growth is still connected to large uncertainties. Detection limits of instruments in measuring specific gaseous aerosol precursors and chemical compositions at the molecular level call for computational studies. Computational chemistry could effectively compensate the deficiency of laboratory experiments as well as observations and predict the nucleation mechanisms. We review the present theoretical literatures that discuss nucleation mechanism of atmospheric clusters. Focus of this review is on different nucleation systems involving sulfur-containing species, nitrogen-containing species and iodine-containing species. We hope this review will provide a deep insight for the molecular interaction of nucleation precursors and reveal nucleation mechanism at the molecular level.

Interaction of Glutamic Acid/Protonated Glutamic Acid with Amide and Water Molecules: A Theoretical Study

Amino acids are important nitrogen-containing compounds and organic carbon components that exist widely in the atmosphere. The formation of atmospheric aerosols is affected by their interactions with amides. The dimers formed by glutamic acid (Glu) or protonated glutamic acid (Glu⁺) with three kinds of amide molecules (formamide FA, acetamide AA, urea U) and the hydrated clusters formed by Glu or Glu⁺, U molecules along with one to six water molecules were systematically studied at the M06-2X/6-311++G(3df,3pd) level. U is predicted to form a more stable structure with Glu/Glu⁺ than FA and AA by thermodynamics. If the concentration ratio of FA to U is less than 10⁴, U will play a critical role in NPF. The degree of hydration in Glu⁺-mU-nW is higher than that of Glu-mU-nW (m = 0, 1; n = 0-6) clusters. Notably, Glu contributes more to the Rayleigh scattering properties than glutaric acid and sulfuric acid, and thus may lead to the destruction of atmospheric visibility. This study is helpful to better understand the properties of organic aerosols containing amino acids or amides.

Gas-phase catalytic hydration of I2O5 in the polluted coastal regions: Reaction mechanisms and atmospheric implications

Marine aerosols play an important role in the global aerosol system. In polluted coastal regions, ultra-fine particles have been recognized to be related to iodine-containing species and is more serious due to the impact of atmospheric pollutants. Many previous studies have identified iodine pentoxide (I₂O₅, IP) to be the key species in new particles formation (NPF) in marine regions, but the role of IP in the polluted coastal atmosphere is far to be fully understood. Considering the high humidity and concentrations of pollutants in the polluted coastal regions, the gas-phase hydration of IP catalyzed by sulfuric acid (SA), nitric acid (NA), dimethylamine (DMA), and ammonia (A) have been investigated at DLPNO-CCSD(T)//ωB97X-D/aug-cc-pVTZ + aug-cc-pVTZ-PP with ECP28MDF (for iodine) level of theory. The results show that the hydration of IP involves a significant energy barrier of 22.33 kcal/mol, while the pollutants SA, NA, DMA, and A all could catalyze the hydration of IP. Especially, with SA and DMA as catalysts, the hydration reactions of IP present extremely low barriers and high rate constants. It is suggested that IP is unstable under the catalysis of SA and DMA to generate iodic acid, which is the key component in NPF in marine regions. Thus, the catalytic hydration of IP is very likely to trigger the formation of iodine-containing particles. Our research provides a clear picture of the catalytic hydration of IP as well as theoretical guidance for NPF in the polluted coastal atmosphere.

A theoretical study on the formation mechanism of carboxylic sulfuric anhydride and its potential role in new particle formation

New particle formation (NPF) is the major source of atmospheric aerosol particles. However, the chemical species involved and the exact mechanism are still unclear. Cycloaddition reaction of SO3 to carboxylic acids bas been identified as a possible formation mechanism of carboxylic sulfuric anhydrides which may be involved in NPF. Herein, energy profiles for forming diaterpenylic acetate sulfuric anhydride (DTASA) through cycloaddition of SO3 to diaterpenylic acid acetate (DTAA) and the potential role of DTASA in NPF were studied through computational methods combined with atmospheric cluster dynamics code (ACDC). Gas phase reaction barriers for the two carboxyl groups of DTAA are 0.4 and 0.6 kcal mol-1, respectively, illustrating a feasible formation mechanism for DTASA. According to thermodynamical analysis and dynamical simulations, atmospheric clusters containing DTASA and atmospheric nucleation precursors sulfuric acid (SA), ammonia (NH3) and dimethylamine (DMA) possess both thermodynamically and dynamically higher stabilities than those of DTAA-contained clusters. Furthermore, DTASA-NH3 and DTASA-DMA are more stable than SA-NH3 and SA-DMA, enabling DTASA, even carboxylic sulfuric anhydrides, to become potential participants in the atmospheric NPF process which may hence promote a better understanding of NPF.