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Kucher H, Wenzel JO, Rombach D. Hydrothiolation of Triisopropylsilyl Acetylene Sulfur Pentafluoride - Charting the Chemical Space of β-SF 5 Vinyl Sulfides. Chempluschem 2024; 89:e202400168. [PMID: 38691830 DOI: 10.1002/cplu.202400168] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 04/30/2024] [Accepted: 04/30/2024] [Indexed: 05/03/2024]
Abstract
Recently, we suggested liquid and high-boiling TIPS-CC-SF5 (TASP) as a versatile reagent to access so far elusive SF5-containing building blocks by less specialized laboratories under bench-top conditions. The synthesis of non-aromatic SF5 building blocks generally requires on-site fluorination or pentafluorosulfanylation steps employing toxic and/or gaseous reagents. Herein, we underline the versatility of this reagent by reporting a benign bench-top protocol for the synthesis of Z-configured β-pentafluorosulfanylated vinyl sulfides in good to excellent yields (up to 99 %) with exclusive (Z)-diasteroselectivity and broad functional group tolerance. This method exploits an in-situ protodesilylation-hydrothiolation sequence. This so far uncharted class of compounds was characterized by means of NMR-spectroscopy as well as SC-XRD. Furthermore, we suggest the reaction to proceed via a kinetically controlled closed-shell reaction pathway, corroborated by in-silico experiments.
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Affiliation(s)
- Hannes Kucher
- Department of Chemistry and Applied Biosciences Zürich, Vladimir-Prelog-Weg 2, CH-8093, Zürich, Switzerland
| | - Jonas O Wenzel
- Department of Chemistry and Applied Biosciences Zürich, Vladimir-Prelog-Weg 2, CH-8093, Zürich, Switzerland
| | - David Rombach
- Department of Chemistry and Applied Biosciences Zürich, Vladimir-Prelog-Weg 2, CH-8093, Zürich, Switzerland
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2
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Miles SA, Nillama JA, Hunter L. Tinker, Tailor, Soldier, Spy: The Diverse Roles That Fluorine Can Play within Amino Acid Side Chains. Molecules 2023; 28:6192. [PMID: 37687021 PMCID: PMC10489206 DOI: 10.3390/molecules28176192] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 08/17/2023] [Accepted: 08/17/2023] [Indexed: 09/10/2023] Open
Abstract
Side chain-fluorinated amino acids are useful tools in medicinal chemistry and protein science. In this review, we outline some general strategies for incorporating fluorine atom(s) into amino acid side chains and for elaborating such building blocks into more complex fluorinated peptides and proteins. We then describe the diverse benefits that fluorine can offer when located within amino acid side chains, including enabling 19F NMR and 18F PET imaging applications, enhancing pharmacokinetic properties, controlling molecular conformation, and optimizing target-binding.
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Affiliation(s)
| | | | - Luke Hunter
- School of Chemistry, The University of New South Wales (UNSW), Sydney 2052, Australia
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3
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Mastalerz V, Lam K, Paquin JF. Exploration toward the synthesis of aliphatic SF5-containing compounds using the Kolbe reaction. J Fluor Chem 2023. [DOI: 10.1016/j.jfluchem.2023.110113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/16/2023]
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4
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Chemistry of Pentafluorosulfanyl Derivatives and Related Analogs: From Synthesis to Applications. Chemistry 2022; 28:e202201491. [DOI: 10.1002/chem.202201491] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2022] [Indexed: 12/23/2022]
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Sani M, Zanda M. Recent Advances in the Synthesis and Medicinal Chemistry of SF5 and SF4Cl Compounds. SYNTHESIS-STUTTGART 2022. [DOI: 10.1055/a-1845-9291] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Abstract
AbstractThis short review covers the most important advances published in the literature during the last five years, concerning the synthesis, chemical modifications, and applications of SF5 and SF4Cl compounds in medicinal/bioorganic chemistry and materials science.1 Introduction2 Methods for Incorporation/Manipulation of SF4Cl/SF5 Groups2.1 Nonaromatic SF5 Compounds via Direct Pentafluorosulfanylation of Alkenes and Alkynes2.2 SF4Cl- and SF5-Aryl/Heteroaryl Derivatives3 Synthesis of SF5/SF4Cl/SF4-Substituted Small Molecules3.1 Heterocycles3.2 Amines and Amino Acids3.3 α-SF5 ketones3.4 Miscellaneous Alkyl-, Alkenyl-, and Aryl-SF5 Compounds4 Medicinal/Biological Applications4.1 Anticancer Compounds4.2 Antibacterial and Antiparasitic Compounds4.3 Central Nervous System4.4 Miscellaneous Biological Activity5 Materials Science Applications6 Conclusion
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Hiscocks HG, Yit DL, Pascali G, Ung AT. Incorporation of the pentafluorosulfanyl group through common synthetic transformations. MONATSHEFTE FUR CHEMIE 2021. [DOI: 10.1007/s00706-021-02760-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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7
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Gimenez D, Phelan A, Murphy CD, Cobb SL. 19F NMR as a tool in chemical biology. Beilstein J Org Chem 2021; 17:293-318. [PMID: 33564338 PMCID: PMC7849273 DOI: 10.3762/bjoc.17.28] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Accepted: 01/07/2021] [Indexed: 12/15/2022] Open
Abstract
We previously reviewed the use of 19F NMR in the broad field of chemical biology [Cobb, S. L.; Murphy, C. D. J. Fluorine Chem. 2009, 130, 132-140] and present here a summary of the literature from the last decade that has the technique as the central method of analysis. The topics covered include the synthesis of new fluorinated probes and their incorporation into macromolecules, the application of 19F NMR to monitor protein-protein interactions, protein-ligand interactions, physiologically relevant ions and in the structural analysis of proteins and nucleic acids. The continued relevance of the technique to investigate biosynthesis and biodegradation of fluorinated organic compounds is also described.
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Affiliation(s)
- Diana Gimenez
- Department of Chemistry, Durham University, South Road, Durham, DH13LE, UK
| | - Aoife Phelan
- UCD School of Biomolecular and Biomedical Science, University College Dublin, Belfield, Dublin 4, Ireland
| | - Cormac D Murphy
- UCD School of Biomolecular and Biomedical Science, University College Dublin, Belfield, Dublin 4, Ireland
| | - Steven L Cobb
- Department of Chemistry, Durham University, South Road, Durham, DH13LE, UK
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8
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Brittain WDG, Lloyd CM, Cobb SL. Synthesis of complex unnatural fluorine-containing amino acids. J Fluor Chem 2020; 239:109630. [PMID: 33144742 PMCID: PMC7583769 DOI: 10.1016/j.jfluchem.2020.109630] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Revised: 08/12/2020] [Accepted: 08/12/2020] [Indexed: 01/01/2023]
Abstract
The area of fluorinated amino acid synthesis has seen rapid growth over the past decade. As reports of singly fluorinated natural amino acid derivatives have grown, researchers have turned their attention to develop methodology to access complex proteinogenic examples. A variety of reaction conditions have been employed in this area, exploiting new advances in the wider synthetic community such as photocatalysis and palladium cross-coupling. In addition, novel fluorinated functional groups have also been incorporated into amino acids, with SFX and perfluoro moieties now appearing with more frequency in the literature. This review focuses on synthetic methodology for accessing complex non-proteinogenic amino acids, along with amino acids containing multiple fluorine atoms such as CF3, SF5 and perfluoroaromatic groups.
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Affiliation(s)
| | - Carissa M Lloyd
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Steven L Cobb
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
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Moschner J, Stulberg V, Fernandes R, Huhmann S, Leppkes J, Koksch B. Approaches to Obtaining Fluorinated α-Amino Acids. Chem Rev 2019; 119:10718-10801. [PMID: 31436087 DOI: 10.1021/acs.chemrev.9b00024] [Citation(s) in RCA: 171] [Impact Index Per Article: 28.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Fluorine does not belong to the pool of chemical elements that nature uses to build organic matter. However, chemists have exploited the unique properties of fluorine and produced countless fluoro-organic compounds without which our everyday lives would be unimaginable. The incorporation of fluorine into amino acids established a completely new class of amino acids and their properties, and those of the biopolymers constructed from them are extremely interesting. Increasing interest in this class of amino acids caused the demand for robust and stereoselective synthetic protocols that enable straightforward access to these building blocks. Herein, we present a comprehensive account of the literature in this field going back to 1995. We place special emphasis on a particular fluorination strategy. The four main sections describe fluorinated versions of alkyl, cyclic, aromatic amino acids, and also nickel-complexes to access them. We progress by one carbon unit increments. Special cases of amino acids for which there is no natural counterpart are described at the end of each section. Synthetic access to each of the amino acids is summarized in form of a table at the end of this article with the aim to make the information easily accessible to the reader.
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Affiliation(s)
- Johann Moschner
- Department of Biology, Chemistry and Pharmacy, Institute of Chemistry and Biochemistry , Freie Universität Berlin , Takustr. 3 , 14195 Berlin , Germany
| | - Valentina Stulberg
- Department of Biology, Chemistry and Pharmacy, Institute of Chemistry and Biochemistry , Freie Universität Berlin , Takustr. 3 , 14195 Berlin , Germany
| | - Rita Fernandes
- Department of Biology, Chemistry and Pharmacy, Institute of Chemistry and Biochemistry , Freie Universität Berlin , Takustr. 3 , 14195 Berlin , Germany
| | - Susanne Huhmann
- Department of Biology, Chemistry and Pharmacy, Institute of Chemistry and Biochemistry , Freie Universität Berlin , Takustr. 3 , 14195 Berlin , Germany
| | - Jakob Leppkes
- Department of Biology, Chemistry and Pharmacy, Institute of Chemistry and Biochemistry , Freie Universität Berlin , Takustr. 3 , 14195 Berlin , Germany
| | - Beate Koksch
- Department of Biology, Chemistry and Pharmacy, Institute of Chemistry and Biochemistry , Freie Universität Berlin , Takustr. 3 , 14195 Berlin , Germany
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10
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Brittain WDG, Cobb SL. Tetrafluoropyridyl (TFP): a general phenol protecting group readily cleaved under mild conditions. Org Biomol Chem 2019; 17:2110-2115. [PMID: 30623945 PMCID: PMC6390695 DOI: 10.1039/c8ob02899k] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Herein we introduce tetrafluoropyridyl (TFP) as a new general protecting group for phenols. The TFP protecting group is readily cleaved under mild conditions.
Phenols are extremely valuable building blocks in the areas of pharmaceuticals, natural products, materials and catalysts. In order to carry out modifications on phenols, the phenolic oxygen is routinely protected to prevent unwanted side reactions. Presently many of the protecting groups available can require harsh conditions, specialist equipment, expensive or air/moisture-sensitive reagents to install and remove. Here we introduce the use of the tetrafluoropyridyl (TFP) group as a general protecting group for phenols. TFP can be installed in one step with no sensitivity to water or air, and it is stable under a range of commonly employed reaction conditions including acid and base. The TFP protecting group is readily cleaved under mild conditions with quantitative conversion to the parent phenol, observed in many cases in less than 1 hour.
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11
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Mazuela J, Antonsson T, Knerr L, Marsden SP, Munday RH, Johansson MJ. Iridium‐Catalyzed Asymmetric Hydrogenation of
N
‐Alkyl α‐Aryl Furan‐Containing Imines: an Efficient Route to Unnatural
N
‐Alkyl Arylalanines and Related Derivatives. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201801143] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Javier Mazuela
- Cardiovascular, Renal and Metabolism IMED Biotech UnitAstraZeneca Gothenburg Pepparedsleden 1 Mölndal, SE- 431 83 Sweden
| | - Thomas Antonsson
- Cardiovascular, Renal and Metabolism IMED Biotech UnitAstraZeneca Gothenburg Pepparedsleden 1 Mölndal, SE- 431 83 Sweden
| | - Laurent Knerr
- Cardiovascular, Renal and Metabolism IMED Biotech UnitAstraZeneca Gothenburg Pepparedsleden 1 Mölndal, SE- 431 83 Sweden
| | | | - Rachel H. Munday
- AZ Catalysis Hub, Pharmaceutical Technology and DevelopmentAstraZeneca Silk Road Business Park Macclesfield SK10 2NA U.K
| | - Magnus J. Johansson
- Cardiovascular, Renal and Metabolism IMED Biotech UnitAstraZeneca Gothenburg Pepparedsleden 1 Mölndal, SE- 431 83 Sweden
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