|
1
|
Hou Z, Jiang Y, Zhang L, Tu A, Liu T, Du X, Dai C, Xu Y, Qiao R, Tan J. Characterization and Recombinant Genotypes of HIV-1 in Gansu Province, China. AIDS Res Hum Retroviruses 2021; 37:946-953. [PMID: 34107769 DOI: 10.1089/aid.2021.0008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
It is important to monitor the diversity and evolution of HIV-1 genotypes, especially in some remote and undeveloped regions in China where the diversity and distribution of HIV-1 genotypes are not fully clear. To investigate the genotypes and distribution of HIV-1 in far Northwestern Gansu Province of China, we selected 220 HIV-1-positive plasma samples from the Center for Disease Control and Prevention (CDC) in Gansu from January 2016 to December 2018. The viral load of inclusion samples were over 1,000 copies per milliliter. The gag, pol, and env gene of HIV-1 were amplified by nested reverse transcription-polymerase chain reaction kit, sequenced, and then identified genotypes using HIV-BLAST tool and the neighbor-joining method. One hundred fifty of 220 inclusion samples were successfully determined HIV-1 genotypes. Our results show that circulating recombinant forms (CRF) 07_BC and CRF01_AE are predominant and accounted for 46.7% and 28.0%, respectively. Other HIV-1 subtypes and genotypes included B/B' (6.0%), CRF08_BC (4.0%), and C (1.3%). In addition, we reported CRF65_cpx and CRF55_01B subtypes in Gansu for the first time. Phylogenetic tree analysis showed that the sequences of different samples are scattered in different genotype groups, and no obvious aggregation occurs. Our results indicate the genetic variety and complexity of HIV-1 and provide critical information for HIV/AIDS control and prevention in Gansu Province.
Collapse
Affiliation(s)
- Zongjie Hou
- Gansu Provincial Key Laboratory of Evidence Based Medicine and Clinical Translation and Department of Immunology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, China
| | - Yu Jiang
- Gansu Provincial Key Laboratory of Evidence Based Medicine and Clinical Translation and Department of Immunology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, China
| | - Lincai Zhang
- Gansu Provincial Center for Disease Control and Prevention, Lanzhou, China
| | - Aixia Tu
- Gansu Provincial Center for Disease Control and Prevention, Lanzhou, China
| | - Ting Liu
- Gansu Provincial Key Laboratory of Evidence Based Medicine and Clinical Translation and Department of Immunology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, China
- Department of Geriatrics, the First School of Clinical Medicine, Lanzhou University, Lanzhou, China
| | - Xiufen Du
- Gansu Provincial Key Laboratory of Evidence Based Medicine and Clinical Translation and Department of Immunology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, China
| | - Chen Dai
- Gansu Provincial Key Laboratory of Evidence Based Medicine and Clinical Translation and Department of Immunology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, China
| | - Yaning Xu
- Gansu Provincial Center for Disease Control and Prevention, Lanzhou, China
| | - Ruijuan Qiao
- Gansu Provincial Center for Disease Control and Prevention, Lanzhou, China
| | - Jiying Tan
- Gansu Provincial Key Laboratory of Evidence Based Medicine and Clinical Translation and Department of Immunology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, China
| |
Collapse
|
|
2
|
Adelson M, Wilson HW, Celeste VYM, Linzy S, Kreek MJ, Peles E. Methadone Maintenance Treatment Experience in Macao – Prospective Follow-up for Initial 4.5 Years. J Psychoactive Drugs 2013; 45:313-21. [DOI: 10.1080/02791072.2013.825032] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
|
3
|
Increasing HIV Subtype Diversity in Canadian-Born Patients Living in Southern Alberta, Canada. J Acquir Immune Defic Syndr 2011; 57:e27-9. [DOI: 10.1097/qai.0b013e31821438d9] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|