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Yamagishi Y, Kobayashi Y, Horiguchi A, Kitano D, Yamaguchi H. Supramolecular Polysulfide Polymers with Metal‐Ligand Interactions. ChemistrySelect 2022. [DOI: 10.1002/slct.202103991] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Yuki Yamagishi
- Department of Macromolecular Science Graduate School of Science Osaka University 1-1 Machikaneyama-cho Toyonaka Osaka 560-0043 Japan
| | - Yuichiro Kobayashi
- Department of Macromolecular Science Graduate School of Science Osaka University 1-1 Machikaneyama-cho Toyonaka Osaka 560-0043 Japan
| | - Akiyoshi Horiguchi
- Department of Macromolecular Science Graduate School of Science Osaka University 1-1 Machikaneyama-cho Toyonaka Osaka 560-0043 Japan
| | - Daiki Kitano
- Department of Macromolecular Science Graduate School of Science Osaka University 1-1 Machikaneyama-cho Toyonaka Osaka 560-0043 Japan
| | - Hiroyasu Yamaguchi
- Department of Macromolecular Science Graduate School of Science Osaka University 1-1 Machikaneyama-cho Toyonaka Osaka 560-0043 Japan
- Innovative Catalysis Science Division Institute for Open and Transdisciplinary Research Initiatives (ISC-OTRI) Osaka University Suita Osaka 567-0871 Japan
- Project Research Center for Fundamental Sciences Graduate School of Science Osaka University 1-1 Machikaneyama-cho Toyonaka Osaka 560-0043 Japan
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2
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Han JH, Kim JH, Jung M, Kim SK, Jang YJ. Effects of the Ligand Structure of Cu(
II
) Complexes on Oxidative
DNA
Cleavage. B KOREAN CHEM SOC 2021. [DOI: 10.1002/bkcs.12370] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Ji Hoon Han
- Department of Chemistry Yeungnam University Gyeongsan City 38541 Republic of Korea
- Present address: Department of Applied Chemistry Andong National University Andong‐si 1375 Republic of Korea
| | - Ji Hoon Kim
- Department of Chemistry Yeungnam University Gyeongsan City 38541 Republic of Korea
| | - Maeng‐Joon Jung
- Department of Chemistry Kyungpook National University Daegu 41566 Republic of Korea
| | - Seog K. Kim
- Department of Chemistry Yeungnam University Gyeongsan City 38541 Republic of Korea
| | - Yoon Jung Jang
- College of Basic Education Yeungnam University Gyeongsan City 38541 Republic of Korea
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3
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Rajak S, Schott O, Kaur P, Maris T, Hanan GS, Duong A. Synthesis, crystal structure, characterization of pyrazine diaminotriazine based complexes and their systematic comparative study with pyridyl diaminotriazine based complexes for light-driven hydrogen production. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114412] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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4
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Li S, Miao T, Fu X, Ma F, Gao H, Zhang G. Theoretical study on the DNA interaction properties of copper(II) complexes. Comput Biol Chem 2019; 80:244-248. [PMID: 31026737 DOI: 10.1016/j.compbiolchem.2019.03.021] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2019] [Revised: 03/23/2019] [Accepted: 03/25/2019] [Indexed: 11/28/2022]
Abstract
Theoretical studies on DNA-cleavage and DNA-binding properties of a series of Cu(II) complexes [Cu(bimda)(diimine)] 1-5 have been carried out by density functional theory (DFT). The optimized structures of Cu(II) complexes were docked into parallel, antiparallel and mixed G-quadruplexes, with which the binding energies of complexes 1-5 were obtained. The cytotoxicities of these complexes can be predicted preliminarily by the binding energies. To explore the energy changes of Cu(II) complexes in duplex DNA, the optimized structures of these complexes were docked into the duplex DNA, and the obtained docking models were further optimized using QM/MM method. The DNA-cleavage abilities of complexes 1-5 can be predicted accurately and explained reasonably by the computed intra-molecular reorganization energies of these complexes. This work reported here has implications for the understanding of the interaction Cu(II) complexes with the DNA, which might be helpful for the future directing the design of novel anticancer Cu(II) complexes.
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Affiliation(s)
- Shuang Li
- School of Chemistry and Materials Science, Huaibei Normal University, Huaibei 235000, China
| | - Tifang Miao
- School of Chemistry and Materials Science, Huaibei Normal University, Huaibei 235000, China.
| | - Xianliang Fu
- School of Chemistry and Materials Science, Huaibei Normal University, Huaibei 235000, China
| | - Fang Ma
- School of Chemistry and Materials Science, Huaibei Normal University, Huaibei 235000, China
| | - Hui Gao
- Key Laboratory of Molecular Target and Clinical Pharmacology, School of Pharmaceutical Sciences & Fifth Affiliated Hospital, Guangzhou Medical University, Guangzhou, Guangdong 511436, China; School of Pharmaceutical Sciences, Sun Yat-sen University, Guangzhou 510006, China.
| | - Guoping Zhang
- School of Chemistry and Materials Science, Huaibei Normal University, Huaibei 235000, China
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5
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Won AR, Kim R, Jung MJ, Kim SK, Lee YA. Dependence of the base sequence on the [Cu(2,2′-bipyridine)2(NO3)](NO3)-induced oxidative DNA cleavage probed by linear dichroism. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2017.10.009] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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6
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MONDAL BIPLAB, SEN BUDDHADEB, SARKAR SANDIPAN, ZANGRANDO ENNIO, CHATTOPADHYAY PABITRA. Synthesis, characterization, crystal structure and DNA-binding study of four cadmium(II) pyridine-carboxamide complexes. J CHEM SCI 2017. [DOI: 10.1007/s12039-016-1215-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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7
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Interaction of dinuclear cadmium(II) 5-Cl-salicylaldehyde complexes with calf-thymus DNA. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2016; 61:579-90. [DOI: 10.1016/j.msec.2015.12.054] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2015] [Revised: 11/25/2015] [Accepted: 12/23/2015] [Indexed: 01/07/2023]
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8
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Zianna A, Sumar Ristovic M, Psomas G, Hatzidimitriou A, Coutouli-Argyropoulou E, Lalia-Kantouri M. Cadmium(II) complexes of 5-nitro-salicylaldehyde and α-diimines: synthesis, structure and interaction with calf-thymus DNA. J COORD CHEM 2015. [DOI: 10.1080/00958972.2015.1101075] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Ariadni Zianna
- Faculty of Chemistry, Department of General and Inorganic Chemistry, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Maja Sumar Ristovic
- Faculty of Chemistry, Department of General and Inorganic Chemistry, Aristotle University of Thessaloniki, Thessaloniki, Greece
- Faculty of Chemistry, University of Belgrade, Belgrade, Serbia
| | - George Psomas
- Faculty of Chemistry, Department of General and Inorganic Chemistry, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Antonis Hatzidimitriou
- Faculty of Chemistry, Department of General and Inorganic Chemistry, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Evdoxia Coutouli-Argyropoulou
- Faculty of Chemistry, Department of Organic Chemistry and Biochemistry, Aristotle University of Thessaloniki, Thessaloniki, Greece
| | - Maria Lalia-Kantouri
- Faculty of Chemistry, Department of General and Inorganic Chemistry, Aristotle University of Thessaloniki, Thessaloniki, Greece
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9
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Ravi M, Chennam KP, Ushaiah B, Eslavath RK, Perugu S, Ajumeera R, Devi CS. A Study on Spectro-Analytical Aspects, DNA - Interaction, Photo-Cleavage, Radical Scavenging, Cytotoxic Activities, Antibacterial and Docking Properties of 3 - (1 - (6 - methoxybenzo [d] thiazol - 2 - ylimino) ethyl) - 6 - methyl - 3H - pyran - 2, 4 - dione and its Metal Complexes. J Fluoresc 2015; 25:1279-96. [PMID: 26315729 DOI: 10.1007/s10895-015-1616-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2015] [Accepted: 07/05/2015] [Indexed: 12/21/2022]
Abstract
The focus of the present work is on the design, synthesis, characterization, DNA-interaction, photo-cleavage, radical scavenging, in-vitro cytotoxicity, antimicrobial, docking and kinetic studies of Cu (II), Cd (II), Ce (IV) and Zr (IV) metal complexes of an imine derivative, 3 - (1 - (6 - methoxybenzo [d] thiazol - 2 - ylimino) ethyl) - 6 - methyl - 3H - pyran - 2, 4 - dione. The investigation of metal ligand interactions for the determination of composition of metal complexes, corresponding kinetic studies and antioxidant activity in solution was carried out by spectrophotometric methods. The synthesized metal complexes were characterized by EDX analysis, Mass, IR, (1)H-NMR, (13)C-NMR and UV-Visible spectra. DNA binding studies of metal complexes with Calf thymus (CT) DNA were carried out at room temperature by employing UV-Vis electron absorption, fluorescence emission and viscosity measurement techniques. The results revealed that these complexes interact with DNA through intercalation. The results of in vitro antibacterial studies showed the enhanced activity of chelating agent in metal chelated form and thus inferring scope for further development of new therapeutic drugs. Cell viability experiments indicated that all complexes showed significant dose dependent cytotoxicity in selected cell lines. The molecular modeling and docking studies were carried out with energy minimized structures of metal complexes to identify the receptor to metal interactions.
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Affiliation(s)
- Mudavath Ravi
- Department of Chemistry, Osmania University, Hyderabad, 500 007, Telangana, India
| | | | - B Ushaiah
- Department of Chemistry, Osmania University, Hyderabad, 500 007, Telangana, India
| | - Ravi Kumar Eslavath
- Department of Bio-Chemistry, Osmania University, Hyderabad, 500 007, Telangana, India
| | - Shyam Perugu
- Department of Bio-Chemistry, Osmania University, Hyderabad, 500 007, Telangana, India
| | - Rajanna Ajumeera
- National Institute of Nutrition, Hyderabad, 500 007, Telangana, India
| | - Ch Sarala Devi
- Department of Chemistry, Osmania University, Hyderabad, 500 007, Telangana, India.
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10
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Oxidative DNA cleavage by Cu(II) complexes: Effect of periphery substituent groups. J Inorg Biochem 2015; 153:143-149. [PMID: 26239544 DOI: 10.1016/j.jinorgbio.2015.07.015] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2015] [Revised: 06/05/2015] [Accepted: 07/15/2015] [Indexed: 01/10/2023]
Abstract
A series of structurally-related [Cu(R-benzyl-dipicolylamine)(NO3)2] complexes, where R=methoxy- (1), methyl- (2), H- (3), fluoro- (4), and nitro-group (5), were synthesized, and their activity on DNA cleavage was investigated by linear dichroism (LD) and electrophoresis. The addition of a benzyl group to the dipicolylamine ligand of the [Cu(dipicolylamine)(NO3)2] complex (A), i.e., the [Cu(benzyl-dipicolylamine)(NO3)2] complex (3), caused significant enhancement in the efficiency of oxidative cleavage of both super-coiled (sc) and double stranded (ds) DNA, as evidenced by the electrophoresis pattern and faster decrease in the LD intensity at 260nm. The efficiency in DNA cleavage was also altered with further modifications of the benzyl group by the introduction of various substituents at the para-position. The cleavage efficiency appeared to be the largest when the methyl group was attached. The order of efficiency in DNA cleavage was methyl>methoxy≈H>fluoro≈nitro group. When an electron-withdrawing group was introduced, the cleavage efficiency decreased remarkably. The reactive oxygen species involved in the cleavage process were the superoxide radical and singlet oxygen. A possible mechanism for this variation in the DNA cleavage efficiency was proposed.
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11
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Chitrapriya N, Shin JH, Hwang IH, Kim Y, Kim C, Kim SK. Synthesis, DNA binding profile and DNA cleavage pathway of divalent metal complexes. RSC Adv 2015. [DOI: 10.1039/c5ra10695h] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Divalent metal complexes of dipyridylamine ligand with an anthracene moiety induced considerable oxidative DNA cleavage in the presence hydrogen peroxide and dioxygen.
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Affiliation(s)
| | - Jong Heon Shin
- Department of Chemistry
- Yeungnam University
- Gyeongsan
- Republic of Korea
| | - In Hong Hwang
- Department of Fine Chemistry and Department of Interdisciplinary Bio IT Materials
- Seoul National University of Science and Technology
- Seoul 139-743
- Republic of Korea
| | - Youngmee Kim
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 120-750
- Republic of Korea
| | - Cheal Kim
- Department of Fine Chemistry and Department of Interdisciplinary Bio IT Materials
- Seoul National University of Science and Technology
- Seoul 139-743
- Republic of Korea
| | - Seog K. Kim
- Department of Chemistry
- Yeungnam University
- Gyeongsan
- Republic of Korea
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12
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Jayamani A, Thamilarasan V, Ganesan V, Sengottuvelan N. Structural, Electrochemical, DNA Binding and Cleavage Properties of Nickel(II) Complex [Ni(H2biim)2(H2O)2]2+of 2,2'-Biimidazole. B KOREAN CHEM SOC 2013. [DOI: 10.5012/bkcs.2013.34.12.3695] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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