1
|
Zhou Y, Zhang W, Wan Y, Jin W, Zhang Y, Li Y, Chen B, Jiang M, Fang X. Mosquitocidal toxin-like islands in Bacillus thuringiensis S2160-1 revealed by complete-genome sequence and MS proteomic analysis. Sci Rep 2024; 14:15216. [PMID: 38956138 PMCID: PMC11219804 DOI: 10.1038/s41598-024-66048-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Accepted: 06/26/2024] [Indexed: 07/04/2024] Open
Abstract
Here, we present the whole genome sequence of Bt S2160-1, a potential alternative to the mosquitocidal model strain, Bti. One chromosome genome and four mega-plasmids were contained in Bt S2160-1, and 13 predicted genes encoding predicted insecticidal crystal proteins were identified clustered on one plasmid pS2160-1p2 containing two pathogenic islands (PAIs) designed as PAI-1 (Cry54Ba, Cry30Ea4, Cry69Aa-like, Cry50Ba2-like, Cry4Ca1-like, Cry30Ga2, Cry71Aa-like, Cry72Aa-like, Cry70Aa-like, Cyt1Da2-like and Vpb4C1-like) and PAI-2 (Cyt1Aa-like, and Tpp80Aa1-like). The clusters appear to represent mosquitocidal toxin islands similar to pathogenicity islands. Transcription/translation of 10 of the 13 predicted genes was confirmed by whole-proteome analysis using LTQ-Orbitrap LC-MS/MS. In summary, the present study identified the existence of a mosquitocidal toxin island in Bacillus thuringiensis, and provides important genomic information for understanding the insecticidal mechanism of B. thuringiensis.
Collapse
Affiliation(s)
- Yan Zhou
- Guangxi Key Laboratory for Polysaccharide Materials and Modifications, School of Marine Sciences and Biotechnology, Guangxi Minzu University, Nanning, 530006, China
| | - Wenfei Zhang
- Ministry of Education Key Laboratory for Ecology of Tropical Islands, College of Life Sciences, Hainan Normal University, Haikou, 571158, Hainan, China
| | - Yusong Wan
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Wujun Jin
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Yan Zhang
- School of Life Science and Technology, Harbin Institute of Technology, Harbin, 150001, China
| | - Youzhi Li
- Guangxi Research Center for Microbial and Enzyme Engineering Technology, College of Life Science and Technology, Guangxi University, Nanning, 530004, Guangxi, China
| | - Baoshan Chen
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning, 530004, Guangxi, China
| | - Mingguo Jiang
- Guangxi Key Laboratory for Polysaccharide Materials and Modifications, School of Marine Sciences and Biotechnology, Guangxi Minzu University, Nanning, 530006, China
| | - Xuanjun Fang
- Hainan Institute of Tropical Agricultural Resources, Sanya, 572025, Hainan, China.
- Institute of Life Science, Jiyang College of Zhejiang A&F University, Zhuji, 311800, Zhejiang, China.
| |
Collapse
|
3
|
Huang T, Lin Q, Qian X, Zheng Y, Yao J, Wu H, Li M, Jin X, Pan X, Zhang L, Guan X. Nematicidal Activity of Cry1Ea11 from Bacillus thuringiensis BRC-XQ12 Against the Pine Wood Nematode (Bursaphelenchus xylophilus). PHYTOPATHOLOGY 2018; 108:44-51. [PMID: 28945518 DOI: 10.1094/phyto-05-17-0179-r] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
The nematicidal activity of 92 Bacillus thuringiensis strains against the pine wood nematode Bursaphelenchus xylophilus, one of the world's top 10 plant-parasitic nematodes, was determined. The insecticidal crystal proteins (ICPs) from Bacillus thuringiensis BRC-XQ12 were the most toxic to Bursaphelenchus xylophilus, with a lethal concentration 50 (LC50) of 32.13 μg/ml. Because the ICPs expressed by Bacillus thuringiensis BRC-XQ12 were closest to Cry1Ea6 and B. thuringiensis BRC-XQ12 contained four kinds of cry1 subgenes (cry1Aa, cry1Cb, cry1Ea, and cry1Ia), Cry1Ea was most likely to be the key active component against the nematode. The 3,516-bp cry1Ea11 gene from BRC-XQ12, as designated by the B. thuringiensis δ-endotoxin nomenclature committee, was expressed in Escherichia coli. Purified Cry1Ea11 showed an LC50 of 32.53 and 23.23 μg/ml at 24 and 48 h, with corresponding virulence equations of Y = 32.15X + 1.38 (R2 = 0.9951) and Y = 34.29X + 3.16 (R2 = 0.9792), respectively. In order to detect the pathway of B. thuringiensis Cry1Ea11 into Bursaphelenchus xylophilus, the nematode was fed with NHS-rhodamine-labeled GST-Cry1Ea11. The results of confocal laser-scanning microscopy showed that the 159-kDa GST-Cry1Ea11 could be detected in the stylet and the esophageal lumen of the pine wood nematode, indicating that GST-Cry1Ea11 could enter into the nematode through the stylet. As far as we know, no Cry1 proteins have been shown to have activity against plant-parasitic nematodes before. These results demonstrate that Cry1Ea11 is a promising nematicidal protein for controlling pine wilt disease rendered by B. xylophilus, further dramatically broadening the spectrum of Bacillus thuringiensis ICPs.
Collapse
Affiliation(s)
- Tianpei Huang
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| | - Qunxin Lin
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| | - Xiaoli Qian
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| | - Ying Zheng
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| | - Junmin Yao
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| | - Huachuan Wu
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| | - Mengmeng Li
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| | - Xin Jin
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| | - Xiaohong Pan
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| | - Lingling Zhang
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| | - Xiong Guan
- All authors: State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops & Key Laboratory of Biopesticide and Chemical Biology (Ministry of Education), College of Life Sciences, Fujian Agriculture and Forestry University, and first, fifth, sixth, seventh, eighth, ninth, tenth, and eleventh authors: Fujian-Taiwan Joint Center for Ecological Control of Crop Pests, Fuzhou, Fujian, People's Republic of China, 350002
| |
Collapse
|
4
|
Detection of new cry genes of Bacillus thuringiensis by use of a novel PCR primer system. Appl Environ Microbiol 2010; 76:6150-5. [PMID: 20656876 DOI: 10.1128/aem.00797-10] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
On the basis of the known cry gene sequences of Bacillus thuringiensis, three sets of primers were designed from four conserved blocks found in the delta-endotoxin-coding region. The primer pairs designed amplify the regions between blocks 1 and 5, 2 and 5, and 1 and 4. In silico analyses indicated that 100% of the known three-domain cry gene sequences can be amplified by these sets of primers. To test their ability to amplify known and unknown cry gene sequences, 27 strains from the CINVESTAV (LBIT series) collection showing atypical crystal morphology were selected. Their DNA was used as the template with the new primer system, and after a systematic amplification and sequencing of the amplicons, each strain showed one or more cry-related sequences, totaling 54 different sequences harbored by the 27 strains. Seven sequences were selected on the basis of their low level of identity to the known cry sequences, and once cloning and sequencing of the complete open reading frames were done, three new cry-type genes (primary ranks) were identified and the toxins that they encode were designated Cry57Aa1, Cry58Aa1, and Cry59Aa1 by the B. thuringiensis Toxin Nomenclature Committee. The rest of the seven sequences were classified Cry8Ka2, Cry8-like, Cry20Ba1, and Cry1Ma1 by the committee. The crystal morphology of the selected strains and analysis of the new Cry protein sequences showed interesting peculiarities.
Collapse
|