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For: Kelch BA, Agard DA. Mesophile versus thermophile: insights into the structural mechanisms of kinetic stability. J Mol Biol 2007;370:784-95. [PMID: 17543987 DOI: 10.1016/j.jmb.2007.04.078] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2007] [Revised: 04/18/2007] [Accepted: 04/24/2007] [Indexed: 10/23/2022]
Number Cited by Other Article(s)
1
Nixon CF, Lim SA, Sailer ZR, Zheludev IN, Gee CL, Kelch BA, Harms MJ, Marqusee S. Exploring the Evolutionary History of Kinetic Stability in the α-Lytic Protease Family. Biochemistry 2021;60:170-181. [PMID: 33433210 DOI: 10.1021/acs.biochem.0c00720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
2
Serine bacteriolytic protease L1 of Lysobacter sp. XL1 complexed with protease inhibitor AEBSF: features of interaction. Process Biochem 2019. [DOI: 10.1016/j.procbio.2019.02.013] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
3
Martins A, Pfirrmann T, Heessen S, Sundqvist G, Bulone V, Andréasson C, Ljungdahl PO. Ssy5 is a signaling serine protease that exhibits atypical biogenesis and marked S1 specificity. J Biol Chem 2018;293:8362-8378. [PMID: 29661936 DOI: 10.1074/jbc.ra118.002457] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2018] [Revised: 04/06/2018] [Indexed: 11/06/2022]  Open
4
Feller G. Protein folding at extreme temperatures: Current issues. Semin Cell Dev Biol 2017;84:129-137. [PMID: 28941878 DOI: 10.1016/j.semcdb.2017.09.003] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2017] [Revised: 08/18/2017] [Accepted: 09/05/2017] [Indexed: 10/18/2022]
5
Evolutionary trend toward kinetic stability in the folding trajectory of RNases H. Proc Natl Acad Sci U S A 2016;113:13045-13050. [PMID: 27799545 DOI: 10.1073/pnas.1611781113] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
6
Balcão VM, Vila MMDC. Structural and functional stabilization of protein entities: state-of-the-art. Adv Drug Deliv Rev 2015;93:25-41. [PMID: 25312675 DOI: 10.1016/j.addr.2014.10.005] [Citation(s) in RCA: 150] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2013] [Revised: 08/03/2014] [Accepted: 10/01/2014] [Indexed: 12/13/2022]
7
Demidyuk IV, Shubin AV, Gasanov EV, Kostrov SV. Propeptides as modulators of functional activity of proteases. Biomol Concepts 2015;1:305-22. [PMID: 25962005 DOI: 10.1515/bmc.2010.025] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]  Open
8
Wang D, Coco MW, Rose RB. Interactions with the bifunctional interface of the transcriptional coactivator DCoH1 are kinetically regulated. J Biol Chem 2015;290:4319-29. [PMID: 25538247 DOI: 10.1074/jbc.m114.616870] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
9
von Langermann J, Nedrud DM, Kazlauskas RJ. Increasing the reaction rate of hydroxynitrile lyase from Hevea brasiliensis toward mandelonitrile by copying active site residues from an esterase that accepts aromatic esters. Chembiochem 2014;15:1931-8. [PMID: 25044660 DOI: 10.1002/cbic.201402081] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2014] [Indexed: 11/11/2022]
10
Wang H, Andersen KK, Sehgal P, Hagedorn J, Westh P, Borch K, Otzen DE. pH Regulation of the Kinetic Stability of the Lipase from Thermomyces lanuginosus. Biochemistry 2012;52:264-76. [DOI: 10.1021/bi301258e] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
11
Farrell D, Webb H, Johnston MA, Poulsen TA, O’Meara F, Christensen LLH, Beier L, Borchert TV, Nielsen JE. Toward Fast Determination of Protein Stability Maps: Experimental and Theoretical Analysis of Mutants of a Nocardiopsis prasina Serine Protease. Biochemistry 2012;51:5339-47. [DOI: 10.1021/bi201926f] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
12
Functional modulation of a protein folding landscape via side-chain distortion. Proc Natl Acad Sci U S A 2012;109:9414-9. [PMID: 22635267 DOI: 10.1073/pnas.1119274109] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
13
Guzzi R, Sportelli L, Yanagisawa S, Li C, Kostrz D, Dennison C. The influence of active site loop mutations on the thermal stability of azurin from Pseudomonas aeruginosa. Arch Biochem Biophys 2012;521:18-23. [PMID: 22446157 DOI: 10.1016/j.abb.2012.03.007] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2012] [Revised: 03/05/2012] [Accepted: 03/06/2012] [Indexed: 10/28/2022]
14
Thermodynamic and kinetic stability of a large multi-domain enzyme from the hyperthermophile Aeropyrum pernix. Extremophiles 2010;14:213-23. [PMID: 20058042 DOI: 10.1007/s00792-009-0300-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2009] [Accepted: 12/21/2009] [Indexed: 10/20/2022]
15
Thermo- and mesostabilizing protein interactions identified by temperature-dependent statistical potentials. Biophys J 2010;98:667-77. [PMID: 20159163 DOI: 10.1016/j.bpj.2009.10.050] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2009] [Revised: 10/26/2009] [Accepted: 10/28/2009] [Indexed: 11/24/2022]  Open
16
Protein kinetic stability. Biophys Chem 2010;148:1-15. [DOI: 10.1016/j.bpc.2010.02.004] [Citation(s) in RCA: 274] [Impact Index Per Article: 19.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2010] [Accepted: 02/06/2010] [Indexed: 01/23/2023]
17
Unfolding simulations reveal the mechanism of extreme unfolding cooperativity in the kinetically stable alpha-lytic protease. PLoS Comput Biol 2010;6:e1000689. [PMID: 20195497 PMCID: PMC2829044 DOI: 10.1371/journal.pcbi.1000689] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2009] [Accepted: 01/26/2010] [Indexed: 12/03/2022]  Open
18
Barzegar A, Moosavi-Movahedi AA, Pedersen JZ, Miroliaei M. Comparative thermostability of mesophilic and thermophilic alcohol dehydrogenases: Stability-determining roles of proline residues and loop conformations. Enzyme Microb Technol 2009. [DOI: 10.1016/j.enzmictec.2009.04.007] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
19
Tsai CJ, Ma B, Nussinov R. Intra-molecular chaperone: the role of the N-terminal in conformational selection and kinetic control. Phys Biol 2009;6:013001. [PMID: 19193974 DOI: 10.1088/1478-3975/6/1/013001] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
20
Iron binding effects on the kinetic stability and unfolding energetics of a thermophilic phenylalanine hydroxylase from Chloroflexus aurantiacus. J Biol Inorg Chem 2009;14:521-31. [DOI: 10.1007/s00775-009-0467-y] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2008] [Accepted: 01/02/2009] [Indexed: 11/26/2022]
21
Arnórsdóttir J, Sigtryggsdóttir AR, Thorbjarnardóttir SH, Kristjánsson MM. Effect of proline substitutions on stability and kinetic properties of a cold adapted subtilase. J Biochem 2008;145:325-9. [PMID: 19074503 DOI: 10.1093/jb/mvn168] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
22
Costas M, Rodríguez-Larrea D, De Maria L, Borchert TV, Gómez-Puyou A, Sanchez-Ruiz JM. Between-species variation in the kinetic stability of TIM proteins linked to solvation-barrier free energies. J Mol Biol 2008;385:924-37. [PMID: 18992756 DOI: 10.1016/j.jmb.2008.10.056] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2008] [Revised: 10/16/2008] [Accepted: 10/20/2008] [Indexed: 11/17/2022]
23
Goihberg E, Dym O, Tel-Or S, Shimon L, Frolow F, Peretz M, Burstein Y. Thermal stabilization of the protozoan Entamoeba histolytica alcohol dehydrogenase by a single proline substitution. Proteins 2008;72:711-9. [PMID: 18260103 DOI: 10.1002/prot.21946] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
24
Stolworthy TS, Korkegian AM, Willmon CL, Ardiani A, Cundiff J, Stoddard BL, Black ME. Yeast cytosine deaminase mutants with increased thermostability impart sensitivity to 5-fluorocytosine. J Mol Biol 2008;377:854-69. [PMID: 18291415 DOI: 10.1016/j.jmb.2008.01.002] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2007] [Revised: 12/29/2007] [Accepted: 01/02/2008] [Indexed: 11/25/2022]
25
Kinetic folding of Haloferax volcanii and Escherichia coli dihydrofolate reductases: haloadaptation by unfolded state destabilization at high ionic strength. J Mol Biol 2008;376:1451-62. [PMID: 18207162 DOI: 10.1016/j.jmb.2007.12.056] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2007] [Revised: 12/15/2007] [Accepted: 12/20/2007] [Indexed: 11/24/2022]
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