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For: Pashley CL, Morgan GJ, Kalverda AP, Thompson GS, Kleanthous C, Radford SE. Conformational properties of the unfolded state of Im7 in nondenaturing conditions. J Mol Biol 2012;416:300-18. [PMID: 22226836 PMCID: PMC3314952 DOI: 10.1016/j.jmb.2011.12.041] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2011] [Revised: 12/19/2011] [Accepted: 12/20/2011] [Indexed: 11/04/2022]
Number Cited by Other Article(s)
1
He W, Li X, Xue H, Yang Y, Mencius J, Bai L, Zhang J, Xu J, Wu B, Xue Y, Quan S. Insights into the client protein release mechanism of the ATP-independent chaperone Spy. Nat Commun 2022;13:2818. [PMID: 35595811 PMCID: PMC9122904 DOI: 10.1038/s41467-022-30499-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Accepted: 04/22/2022] [Indexed: 11/09/2022]  Open
2
Mitra R, Wu K, Lee C, Bardwell JCA. ATP-Independent Chaperones. Annu Rev Biophys 2022;51:409-429. [PMID: 35167761 DOI: 10.1146/annurev-biophys-090121-082906] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
3
Noyes-Whitney Dissolution Model-Based pH-Sensitive Slow Release of Paclitaxel (Taxol) from Human Hair-Derived Keratin Microparticle Carriers. BIOMED RESEARCH INTERNATIONAL 2021;2021:6657482. [PMID: 34046500 PMCID: PMC8128610 DOI: 10.1155/2021/6657482] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Revised: 04/15/2021] [Accepted: 04/26/2021] [Indexed: 11/18/2022]
4
Sachsenhauser V, Deng X, Kim HH, Jankovic M, Bardwell JC. Yeast Tripartite Biosensors Sensitive to Protein Stability and Aggregation Propensity. ACS Chem Biol 2020;15:1078-1088. [PMID: 32105441 DOI: 10.1021/acschembio.0c00083] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
5
Sen S, Udgaonkar JB. Binding-induced folding under unfolding conditions: Switching between induced fit and conformational selection mechanisms. J Biol Chem 2019;294:16942-16952. [PMID: 31582563 PMCID: PMC6851327 DOI: 10.1074/jbc.ra119.009742] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2019] [Revised: 09/14/2019] [Indexed: 12/11/2022]  Open
6
Martin EM, Jackson MP, Gamerdinger M, Gense K, Karamonos TK, Humes JR, Deuerling E, Ashcroft AE, Radford SE. Conformational flexibility within the nascent polypeptide-associated complex enables its interactions with structurally diverse client proteins. J Biol Chem 2018;293:8554-8568. [PMID: 29650757 PMCID: PMC5986199 DOI: 10.1074/jbc.ra117.001568] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2017] [Revised: 04/07/2018] [Indexed: 12/12/2022]  Open
7
Huynh L, Neale C, Pomès R, Chan HS. Molecular recognition and packing frustration in a helical protein. PLoS Comput Biol 2017;13:e1005909. [PMID: 29261665 PMCID: PMC5757960 DOI: 10.1371/journal.pcbi.1005909] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2017] [Revised: 01/08/2018] [Accepted: 11/28/2017] [Indexed: 01/25/2023]  Open
8
He L, Sharpe T, Mazur A, Hiller S. A molecular mechanism of chaperone-client recognition. SCIENCE ADVANCES 2016;2:e1601625. [PMID: 28138538 PMCID: PMC5262456 DOI: 10.1126/sciadv.1601625] [Citation(s) in RCA: 52] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2016] [Accepted: 10/12/2016] [Indexed: 05/13/2023]
9
Horowitz S, Salmon L, Koldewey P, Ahlstrom LS, Martin R, Quan S, Afonine PV, van den Bedem H, Wang L, Xu Q, Trievel RC, Brooks CL, Bardwell JCA. Visualizing chaperone-assisted protein folding. Nat Struct Mol Biol 2016;23:691-7. [PMID: 27239796 PMCID: PMC4937829 DOI: 10.1038/nsmb.3237] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2015] [Accepted: 05/04/2016] [Indexed: 12/26/2022]
10
Koldewey P, Stull F, Horowitz S, Martin R, Bardwell JCA. Forces Driving Chaperone Action. Cell 2016;166:369-379. [PMID: 27293188 DOI: 10.1016/j.cell.2016.05.054] [Citation(s) in RCA: 77] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2016] [Revised: 05/02/2016] [Accepted: 05/16/2016] [Indexed: 11/30/2022]
11
Orevi T, Rahamim G, Amir D, Kathuria S, Bilsel O, Matthews CR, Haas E. Sequential Closure of Loop Structures Forms the Folding Nucleus during the Refolding Transition of the Escherichia coli Adenylate Kinase Molecule. Biochemistry 2015;55:79-91. [DOI: 10.1021/acs.biochem.5b00849] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
12
Substrate protein folds while it is bound to the ATP-independent chaperone Spy. Nat Struct Mol Biol 2015;23:53-58. [PMID: 26619265 PMCID: PMC4847750 DOI: 10.1038/nsmb.3133] [Citation(s) in RCA: 60] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2015] [Accepted: 11/02/2015] [Indexed: 12/12/2022]
13
Calabrese AN, Ault JR, Radford SE, Ashcroft AE. Using hydroxyl radical footprinting to explore the free energy landscape of protein folding. Methods 2015;89:38-44. [PMID: 25746386 PMCID: PMC4651025 DOI: 10.1016/j.ymeth.2015.02.018] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2015] [Revised: 02/17/2015] [Accepted: 02/23/2015] [Indexed: 01/26/2023]  Open
14
Sugita M, Matsuoka M, Kikuchi T. Topological and sequence information predict that foldons organize a partially overlapped and hierarchical structure. Proteins 2015;83:1900-13. [PMID: 26248725 DOI: 10.1002/prot.24874] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2015] [Revised: 06/23/2015] [Accepted: 07/29/2015] [Indexed: 11/09/2022]
15
Chen T, Chan HS. Native contact density and nonnative hydrophobic effects in the folding of bacterial immunity proteins. PLoS Comput Biol 2015;11:e1004260. [PMID: 26016652 PMCID: PMC4446218 DOI: 10.1371/journal.pcbi.1004260] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2015] [Accepted: 03/29/2015] [Indexed: 11/18/2022]  Open
16
McMorran LM, Brockwell DJ, Radford SE. Mechanistic studies of the biogenesis and folding of outer membrane proteins in vitro and in vivo: what have we learned to date? Arch Biochem Biophys 2014;564:265-80. [PMID: 24613287 PMCID: PMC4262575 DOI: 10.1016/j.abb.2014.02.011] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2014] [Revised: 02/16/2014] [Accepted: 02/20/2014] [Indexed: 11/17/2022]
17
Energetically significant networks of coupled interactions within an unfolded protein. Proc Natl Acad Sci U S A 2014;111:12079-84. [PMID: 25099351 DOI: 10.1073/pnas.1402054111] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]  Open
18
Mantsyzov AB, Maltsev AS, Ying J, Shen Y, Hummer G, Bax A. A maximum entropy approach to the study of residue-specific backbone angle distributions in α-synuclein, an intrinsically disordered protein. Protein Sci 2014;23:1275-90. [PMID: 24976112 DOI: 10.1002/pro.2511] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2014] [Accepted: 06/16/2014] [Indexed: 01/16/2023]
19
Exploring the Minimally Frustrated Energy Landscape of Unfolded ACBP. J Mol Biol 2014;426:722-34. [DOI: 10.1016/j.jmb.2013.10.031] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2013] [Revised: 10/23/2013] [Accepted: 10/24/2013] [Indexed: 12/18/2022]
20
Figueiredo AM, Whittaker SBM, Knowling SE, Radford SE, Moore GR. Conformational dynamics is more important than helical propensity for the folding of the all α-helical protein Im7. Protein Sci 2013;22:1722-38. [PMID: 24123274 DOI: 10.1002/pro.2372] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2013] [Revised: 08/30/2013] [Accepted: 09/04/2013] [Indexed: 11/06/2022]
21
The stability of 2-state, 3-state and more-state proteins from simple spectroscopic techniques... plus the structure of the equilibrium intermediates at the same time. Arch Biochem Biophys 2013;531:4-13. [DOI: 10.1016/j.abb.2012.10.014] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2012] [Revised: 10/22/2012] [Accepted: 10/28/2012] [Indexed: 11/20/2022]
22
Udgaonkar JB. Polypeptide chain collapse and protein folding. Arch Biochem Biophys 2013;531:24-33. [DOI: 10.1016/j.abb.2012.10.003] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2012] [Revised: 10/01/2012] [Accepted: 10/08/2012] [Indexed: 12/11/2022]
23
Shpiruk TA, Khajehpour M. The effect of urea on aqueous hydrophobic contact-pair interactions. Phys Chem Chem Phys 2013;15:213-22. [DOI: 10.1039/c2cp42759a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
24
Khan MKA, Miller AL, Bowler BE. Tryptophan stabilizes His-heme loops in the denatured state only when it is near a loop end. Biochemistry 2012;51:3586-95. [PMID: 22486179 DOI: 10.1021/bi300212a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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