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Moztarzadeh O, Jamshidi M, Taherpour AA, Babuska V. Molecular modelling of fullerene C 60 functionalized by nitric oxide for use in biological environment. Sci Rep 2024; 14:2565. [PMID: 38297014 PMCID: PMC10831047 DOI: 10.1038/s41598-024-53050-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 01/27/2024] [Indexed: 02/02/2024] Open
Abstract
The unique potential of fullerene C60 for various biological applications has ignited significant interest. However, its inherent non-polarity poses a critical challenge for its effective integration within biological systems. This study delves into the intricate physicochemical characteristics of the innovative [C60 + NO] complex using density functional theory and time-dependent density functional theory. The computational analyses encompass molecular charge, surface electrostatic potential, and dipole moment evaluations. Impressively, the dipole moment of the [C60 + NO] complex significantly increases to 12.92 D. Meticulous surface analysis reveals a subtle interplay between molecular structures, indicating weak interactions. The analysis of the absorption spectrum unveils a noteworthy red-shift of 200 nm subsequent to complex formation. To elucidate the electron transfer mechanisms, we explore photo-induced electron transfer through CAM-B3LYP. This exploration elucidates intricate pathways governing electron transfer, with complementary insights gleaned from Marcus theory's outputs, especially the Gibbs free energy of electron transfer. Changes in the physicochemical properties of approaching C60 and NO molecules reveal interesting results compared to separate molecules. These findings resonate profoundly in the context of potential biological and pharmaceutical utilization. With implications for the biomedical area, the outcomes linked to the [C60 + NO] complex kindle optimism for pioneering biomedical applications.
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Affiliation(s)
- Omid Moztarzadeh
- Department of Stomatology, University Hospital Pilsen, Faculty of Medicine in Pilsen, Charles University, 323 00, Pilsen, Czech Republic
- Department of Anatomy, Faculty of Medicine in Pilsen, Charles University, 323 00, Pilsen, Czech Republic
| | - Morteza Jamshidi
- Young Researchers and Elite Club, Kermanshah Branch, Islamic Azad University, Kermanshah, Iran
| | | | - Vaclav Babuska
- Department of Medical Chemistry and Biochemistry, Faculty of Medicine in Pilsen, Charles University, 323 00, Pilsen, Czech Republic.
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Perveen M, Hadia NMA, Noreen A, Mehmood RF, Nasr S, Yahia IS, Khera RA, Iqbal J. Controlled supramolecular interactions for targeted release of Amiodarone drug through Graphyne to treat cardiovascular diseases: An in silico study. J Mol Graph Model 2023; 121:108452. [PMID: 36963305 DOI: 10.1016/j.jmgm.2023.108452] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2022] [Revised: 03/02/2023] [Accepted: 03/08/2023] [Indexed: 03/17/2023]
Abstract
In the current study, the drug loading ability of graphyne (GY) for the amiodarone (AMD) drug is investigated for the first time. The efficacy of GY as a carrier for amiodarone (a cardiovascular drug) is evaluated by calculating its electronic, energetic, optimized, and excited state properties with help of the density functional theory (DFT). The AMD drug interacted with the GY molecule with an adsorption energy of about -0.19 eV (gas-phase) and -1.92 eV (aqueous phase), suggesting that the AMD@GY complex is stable in water-phase. The HOMO (highest-occupied molecular-orbital) of the AMD@GY complex is concentrated on the AMD drug while the LUMO (lowest-unoccupied molecular-orbital) is centralized on GY with absolute charge separation, indicating charge transfer will occur between AMD and GY. The charge-transfer process is further studied with the aid of charge-decomposition analysis (CDA). The non-covalent interaction analysis (NCI) exposed that non-covalent forces exist between the GY carrier and AMD drug. These non-covalent forces between AMD drug and GY carrier play a significant role in drug unloading at the targeted or diseased site. Likewise, the calculations at excited-state, charge-state (+1 and -1) influence on GY and AMD@GY complex structures, and photo-induced electron transfer analysis (PET) are also studied for the graphyne-based drug-delivery system. According to PET and electron-hole analysis, fluorescence-quenching will occur upon interaction. Overall, it is concluded that graphyne can be exploited as a drug carrier for amiodarone drug delivery. Researchers will be fascinated to look at alternative 2D nanomaterials for drug delivery applications as a result of this theoretical work.
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Affiliation(s)
- Mehvish Perveen
- Department of Chemistry, University of Agriculture, 38000, Faisalabad, Pakistan
| | - N M A Hadia
- Physics Department, College of Science, Jouf University, P.O. Box 2014, Sakaka, Al-Jouf, Saudi Arabia
| | - Asima Noreen
- Department of Chemistry, University of Agriculture, 38000, Faisalabad, Pakistan
| | - Rana Farhat Mehmood
- Department of Chemistry, University of Education, Township, Lahore, 54770, Pakistan
| | - Samia Nasr
- Research Center for Advanced Materials Science (RCAMS), King Khalid University, Abha, 61413, P.O. Box 9004, Saudi Arabia; Chemistry Department, Faculty of Science, King Khalid University, Abha, 61413, P.O. Box 9004, Saudi Arabia
| | - I S Yahia
- Research Center for Advanced Materials Science (RCAMS), King Khalid University, Abha, 61413, P.O. Box 9004, Saudi Arabia; Laboratory of Nano-Smart Materials for Science and Technology (LNSMST), Department of Physics, Faculty of Science, King Khalid University, P.O. Box 9004, Abha, Saudi Arabia; Center of Medical and Bio-Allied Health Sciences Research (CMBHSR), Ajman University, Ajman, P.O. Box 346, United Arab Emirates
| | - Rasheed Ahmad Khera
- Department of Chemistry, University of Agriculture, 38000, Faisalabad, Pakistan.
| | - Javed Iqbal
- Department of Chemistry, University of Agriculture, 38000, Faisalabad, Pakistan.
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Density Functional Study of the adsorption behavior of 6-mercaptopurine on Primary, Si, Al and Ti doped C60 fullerenes. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.139910] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Ilyas M, Ayu AR, Shehzad RA, Khan MA, Perveen M, Amin S, Muhammad S, Iqbal J. A DFT approach for finding therapeutic potential of two dimensional (2D) graphitic carbon nitride (GCN) as a drug delivery carrier for curcumin to treat cardiovascular diseases. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132547] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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DFT study of 2D graphitic carbon nitride based preferential targeted delivery of levosimendan, a cardiovascular drug. COMPUT THEOR CHEM 2022. [DOI: 10.1016/j.comptc.2021.113584] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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Shamim M, Perveen M, Nazir S, Hussnain M, Mehmood R, Khan MI, Iqbal J. DFT study of therapeutic potential of graphitic carbon nitride (g-C3N4) as a new drug delivery system for carboplatin to treat cancer. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.115607] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Mahboobeh Kian, Elham Tazikeh-Lemeski. Adsorption Behavior of Aromasin onto C20 and C24 Nano-Cages: Density Functional Theory Study. RUSS J INORG CHEM+ 2020. [DOI: 10.1134/s0036023620120074] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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A first principle photo-induced electron transfer study on a quinolin schiff base as Al3+ chemosensor using TD-DFT method. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.01.004] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Ma Z, Han W, Ge C, Zhang R, Wang L, Bian H, Zhang S, Zhang X. Theoretical investigation on the interaction of benzazaborole derivatives with iodide ion: Structural, binding and fluorescence properties analysis. J Mol Graph Model 2019; 92:32-43. [PMID: 31306864 DOI: 10.1016/j.jmgm.2019.06.013] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2019] [Revised: 05/11/2019] [Accepted: 06/18/2019] [Indexed: 10/26/2022]
Abstract
The structural, fluorescence properties and binding interaction of benzazaborole derivatives 1-hydroxy-2-(α-methyl) benzyl-1,2-benzo boron nitrogen heterocyclic-3-phosphate diethyl ester (PADE) and 1-hydroxy-2-(2-chloro) benzyl-1,2-benzo boron nitrogen heterocyclic-3-phosphate diethyl ester (PADC) with iodide ion have been investigated utilizing density functional theory (DFT) and Time-dependent density functional theory (TD-DFT) method, in which the PADE and PADC showed strong emission in aqueous solution and fluorescence quenching was observed upon addition of iodide ion. The theoretical study indicates that the strong hydrogen-bond (O-H…I) between benzazaborole derivatives and iodide ion leads to the formation of the benzazaborole-iodide ion complexes. The excited state properties have been explored by theoretical calculation to understand the fluorescent quenching upon introduction of iodide ion. The strong fluorescent emission is originated by the electron transfer from benzyl and phosphate moieties to benzo boron nitrogen fused heterocycle moiety, while the fluorescence quenching is attributed to the electron transfer between the PADE (PADC) and iodide ion. The density difference (EDD) maps and the frontier molecular orbitals diagrams during excitation and de-excitation process demonstrate that the photoinduced electron transfer process between PADE (PADC) and iodide ion leads to fluorescence quenching after a significant internal conversion.
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Affiliation(s)
- Zhiyan Ma
- College of Chemistry, Liaoning University, Shenyang, 110036, PR China; Department of Chemical and Environmental Engineering, Yingkou Institute of Technology, Yingkou, 115014, PR China
| | - Weifang Han
- School of Materials Science and Engineering, Liaocheng University, Liaocheng, 252000, PR China
| | - Chunhua Ge
- College of Chemistry, Liaoning University, Shenyang, 110036, PR China.
| | - Rui Zhang
- College of Chemistry, Liaoning University, Shenyang, 110036, PR China
| | - Lixia Wang
- College of Chemistry, Liaoning University, Shenyang, 110036, PR China
| | - He Bian
- Binzhou Key Laboratory of Material Chemistry, Department of Chemical Engineering and Safety, Binzhou University, Binzhou, 256600, PR China
| | - Shiguo Zhang
- Binzhou Key Laboratory of Material Chemistry, Department of Chemical Engineering and Safety, Binzhou University, Binzhou, 256600, PR China
| | - Xiangdong Zhang
- College of Chemistry, Liaoning University, Shenyang, 110036, PR China.
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Taherpour A(A, Zolfaghar N, Jamshidi M, Jalilian J, Rezaei O, Shahri Z. Structural distortions of fullerene C60n (n = 0 to −6) by first principle density functional theory. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.02.028] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Taherpour A(A, Jamshidi M, Rezaei O, Belverdi AR. Photoinduced electron transfer process on emission spectrum of N,N′-bis(salicylidene)-1,2-phenylenediamine as a Mg2+ cation chemosensor: A first principle DFT and TDDFT study. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.02.064] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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Rostami Z, Hosseinian A, Monfared A. DFT results against experimental data for electronic properties of C60 and C70 fullerene derivatives. J Mol Graph Model 2018. [DOI: 10.1016/j.jmgm.2018.02.009] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Taherpour A(A, Shahri Z, Rezaei O, Jamshidi M, Fellowes T. Adsorption, intercalation and sensing of helium on yttrium functionalized open edge boron nitride: A first principle DFT and TDDFT study. Chem Phys Lett 2018. [DOI: 10.1016/j.cplett.2017.11.033] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Recognition of switching on or off fluorescence emission spectrum on the Schiff-bases as a Mg2+ chemosensor: A first principle DFT and TD-DFT study. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2017.06.069] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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