• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4657932)   Today's Articles (3963)   Subscriber (51245)
For: Malebary SJ, Alzahrani E, Khan YD. A comprehensive tool for accurate identification of methyl-Glutamine sites. J Mol Graph Model 2021;110:108074. [PMID: 34768228 DOI: 10.1016/j.jmgm.2021.108074] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Revised: 10/15/2021] [Accepted: 11/02/2021] [Indexed: 11/16/2022]
Number Cited by Other Article(s)
1
Daanial Khan Y, Alkhalifah T, Alturise F, Hassan Butt A. DeepDBS: Identification of DNA-binding sites in protein sequences by using deep representations and random forest. Methods 2024;231:26-36. [PMID: 39270885 DOI: 10.1016/j.ymeth.2024.09.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2024] [Revised: 08/26/2024] [Accepted: 09/04/2024] [Indexed: 09/15/2024]  Open
2
Malebary SJ, Alromema N, Suleman MT, Saleem M. m5c-iDeep: 5-Methylcytosine sites identification through deep learning. Methods 2024;230:80-90. [PMID: 39089345 DOI: 10.1016/j.ymeth.2024.07.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2024] [Revised: 07/16/2024] [Accepted: 07/23/2024] [Indexed: 08/03/2024]  Open
3
Naseem A, Khan YD. An intelligent model for prediction of abiotic stress-responsive microRNAs in plants using statistical moments based features and ensemble approaches. Methods 2024;228:65-79. [PMID: 38768931 DOI: 10.1016/j.ymeth.2024.05.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2024] [Revised: 04/30/2024] [Accepted: 05/10/2024] [Indexed: 05/22/2024]  Open
4
Suleman MT, Alturise F, Alkhalifah T, Khan YD. m1A-Ensem: accurate identification of 1-methyladenosine sites through ensemble models. BioData Min 2024;17:4. [PMID: 38360720 PMCID: PMC10868122 DOI: 10.1186/s13040-023-00353-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Accepted: 12/31/2023] [Indexed: 02/17/2024]  Open
5
Suleman MT, Alturise F, Alkhalifah T, Khan YD. iDHU-Ensem: Identification of dihydrouridine sites through ensemble learning models. Digit Health 2023;9:20552076231165963. [PMID: 37009307 PMCID: PMC10064468 DOI: 10.1177/20552076231165963] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2022] [Accepted: 03/09/2023] [Indexed: 04/04/2023]  Open
6
Mini-review: Recent advances in post-translational modification site prediction based on deep learning. Comput Struct Biotechnol J 2022;20:3522-3532. [PMID: 35860402 PMCID: PMC9284371 DOI: 10.1016/j.csbj.2022.06.045] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 06/21/2022] [Accepted: 06/21/2022] [Indexed: 11/23/2022]  Open
7
Alghamdi W, Attique M, Alzahrani E, Ullah MZ, Khan YD. LBCEPred: a machine learning model to predict linear B-cell epitopes. Brief Bioinform 2022;23:6543896. [PMID: 35262658 DOI: 10.1093/bib/bbac035] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 01/03/2022] [Accepted: 01/25/2022] [Indexed: 01/15/2023]  Open
8
Shahid M, Ilyas M, Hussain W, Khan YD. ORI-Deep: improving the accuracy for predicting origin of replication sites by using a blend of features and long short-term memory network. Brief Bioinform 2022;23:6511972. [PMID: 35048955 DOI: 10.1093/bib/bbac001] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 12/30/2021] [Accepted: 01/02/2022] [Indexed: 11/14/2022]  Open
9
Shah AA, Alturise F, Alkhalifah T, Khan YD. Evaluation of deep learning techniques for identification of sarcoma-causing carcinogenic mutations. Digit Health 2022;8:20552076221133703. [PMID: 36312852 PMCID: PMC9597026 DOI: 10.1177/20552076221133703] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 09/30/2022] [Indexed: 11/05/2022]  Open
PrevPage 1 of 1 1Next
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA