1
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Saliba EP, Palani RS, Griffin RG. Homonuclear J-couplings and heteronuclear structural constraints. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2024; 368:107785. [PMID: 39442473 DOI: 10.1016/j.jmr.2024.107785] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2024] [Revised: 10/02/2024] [Accepted: 10/03/2024] [Indexed: 10/25/2024]
Abstract
In magic angle spinning (MAS) experiments involving uniformly 13C/15N labeled proteins, 13C-13C and 13C-15N dipolar recoupling experiments are now routinely used to measure direct dipole-dipole couplings that constrain distances and torsion angles and determine molecular structures. When the distances are short (<4 Å), the direct couplings dominate the evolution of the spin system, and the 13C-13C and 13C-15N J-couplings (scalar couplings) are ignored. However, for structurally interesting >4 Å distances, the dipolar and J-couplings are generally of comparable magnitude, and the variation in J must be included in order to optimize the precision of the experiment. This problem is circumvented in cases with well resolved spectra by using frequency-selective dipolar recoupling methods where the effects of J-couplings are refocused. However, for larger molecules with more spectral crowding, the requisite pulse length to achieve selectivity becomes long and leads to unacceptable sensitivity losses during the pulse or the spectral overlap precludes selective excitation. In this paper, we address this problem with two approaches aimed at facilitating higher precision internuclear distance measurements in systems that are not fully resolved. Namely, (1) we describe an approach for high precision measurements of specific J-couplings using the in-phase anti-phase (IPAP) sequence which is integrated into a non-selective dipolar recoupling technique and (2) we utilize the measured J-couplings to implement a double quantum filter experiment capable of providing the resolution necessary for frequency selective dipolar recoupling techniques without resorting to multidimensional spectroscopy. We illustrate these methods using a 7-peptide segment from the amyloidogenic Sup-35p protein, U-13C/15N-GNNQQNY, where we have measured 25 of the 27 possible one bond 13C-13C J-couplings.
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Affiliation(s)
- Edward P Saliba
- Department of Chemistry and Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139, United States
| | - Ravi Shankar Palani
- Department of Chemistry and Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139, United States
| | - Robert G Griffin
- Department of Chemistry and Francis Bitter Magnet Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139, United States.
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2
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Alaniva N, Saliba EP, Judge PT, Sesti EL, Harneit W, Corzilius B, Barnes AB. Electron-decoupled MAS DNP with N@C 60. Phys Chem Chem Phys 2023; 25:5343-5347. [PMID: 36734969 PMCID: PMC9930727 DOI: 10.1039/d2cp04516h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Accepted: 01/24/2023] [Indexed: 02/04/2023]
Abstract
Frequency-chirped microwaves decouple electron- and 13C-spins in magic-angle spinning N@C60:C60 powder, improving DNP-enhanced 13C NMR signal intensity by 12% for 7 s polarization, and 5% for 30 s polarization. This electron decoupling demonstration is a step toward utilizing N@C60 as a controllable electron-spin source for magic-angle spinning magnetic resonance experiments.
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Affiliation(s)
- Nicholas Alaniva
- Laboratory of Physical Chemistry, ETH Zürich, Zürich 8093, Switzerland.
- Washington University in St. Louis, St. Louis 63130, MO, USA
| | - Edward P Saliba
- Washington University in St. Louis, St. Louis 63130, MO, USA
- Massachusetts Institute of Technology, Cambridge 02139, MA, USA
| | - Patrick T Judge
- Washington University in St. Louis, St. Louis 63130, MO, USA
| | - Erika L Sesti
- Washington University in St. Louis, St. Louis 63130, MO, USA
| | - Wolfgang Harneit
- Department of Physics, Universität Osnabrück, Osnabrück 49076, Germany
| | - Björn Corzilius
- Institute of Chemistry, Department Life, Light & Matter, Universität Rostock, 18059 Rostock, Germany
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3
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Chow WY, De Paëpe G, Hediger S. Biomolecular and Biological Applications of Solid-State NMR with Dynamic Nuclear Polarization Enhancement. Chem Rev 2022; 122:9795-9847. [PMID: 35446555 DOI: 10.1021/acs.chemrev.1c01043] [Citation(s) in RCA: 33] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Solid-state NMR spectroscopy (ssNMR) with magic-angle spinning (MAS) enables the investigation of biological systems within their native context, such as lipid membranes, viral capsid assemblies, and cells. However, such ambitious investigations often suffer from low sensitivity due to the presence of significant amounts of other molecular species, which reduces the effective concentration of the biomolecule or interaction of interest. Certain investigations requiring the detection of very low concentration species remain unfeasible even with increasing experimental time for signal averaging. By applying dynamic nuclear polarization (DNP) to overcome the sensitivity challenge, the experimental time required can be reduced by orders of magnitude, broadening the feasible scope of applications for biological solid-state NMR. In this review, we outline strategies commonly adopted for biological applications of DNP, indicate ongoing challenges, and present a comprehensive overview of biological investigations where MAS-DNP has led to unique insights.
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Affiliation(s)
- Wing Ying Chow
- Univ. Grenoble Alpes, CEA, CNRS, Interdisciplinary Research Institute of Grenoble (IRIG), Modeling and Exploration of Materials Laboratory (MEM), 38054 Grenoble, France.,Univ. Grenoble Alpes, CEA, CNRS, Inst. Biol. Struct. IBS, 38044 Grenoble, France
| | - Gaël De Paëpe
- Univ. Grenoble Alpes, CEA, CNRS, Interdisciplinary Research Institute of Grenoble (IRIG), Modeling and Exploration of Materials Laboratory (MEM), 38054 Grenoble, France
| | - Sabine Hediger
- Univ. Grenoble Alpes, CEA, CNRS, Interdisciplinary Research Institute of Grenoble (IRIG), Modeling and Exploration of Materials Laboratory (MEM), 38054 Grenoble, France
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4
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Judge PT, Sesti EL, Alaniva N, Saliba EP, Price LE, Gao C, Halbritter T, Sigurdsson ST, Kyei GB, Barnes AB. Characterization of frequency-chirped dynamic nuclear polarization in rotating solids. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2020; 313:106702. [PMID: 32203923 DOI: 10.1016/j.jmr.2020.106702] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2019] [Revised: 01/18/2020] [Accepted: 02/21/2020] [Indexed: 06/10/2023]
Abstract
Continuous wave (CW) dynamic nuclear polarization (DNP) is used with magic angle spinning (MAS) to enhance the typically poor sensitivity of nuclear magnetic resonance (NMR) by orders of magnitude. In a recent publication we show that further enhancement is obtained by using a frequency-agile gyrotron to chirp incident microwave frequency through the electron resonance frequency during DNP transfer. Here we characterize the effect of chirped MAS DNP by investigating the sweep time, sweep width, center-frequency, and electron Rabi frequency of the chirps. We show the advantages of chirped DNP with a trityl-nitroxide biradical, and a lack of improvement with chirped DNP using AMUPol, a nitroxide biradical. Frequency-chirped DNP on a model system of urea in a cryoprotecting matrix yields an enhancement of 142, 21% greater than that obtained with CW DNP. We then go beyond this model system and apply chirped DNP to intact human cells. In human Jurkat cells, frequency-chirped DNP improves enhancement by 24% over CW DNP. The characterization of the chirped DNP effect reveals instrument limitations on sweep time and sweep width, promising even greater increases in sensitivity with further technology development. These improvements in gyrotron technology, frequency-agile methods, and in-cell applications are expected to play a significant role in the advancement of MAS DNP.
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Affiliation(s)
- Patrick T Judge
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, United States; Department of Biochemistry, Biophysics & Structural Biology, Washington University in St. Louis, St. Louis, MO 63110, United States
| | - Erika L Sesti
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, United States
| | - Nicholas Alaniva
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, United States
| | - Edward P Saliba
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, United States
| | - Lauren E Price
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, United States
| | - Chukun Gao
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, United States
| | - Thomas Halbritter
- Department of Chemistry, University of Iceland, Science Institute, Dunhaga 3, 107 Reykjavik, Iceland
| | - Snorri Th Sigurdsson
- Department of Chemistry, University of Iceland, Science Institute, Dunhaga 3, 107 Reykjavik, Iceland
| | - George B Kyei
- Department of Medicine, Washington University School of Medicine, St. Louis, MO 63130, United States; Noguchi Memorial Institute for Medical Research, College of Health Sciences, University of Ghana, Legon, Accra, Ghana
| | - Alexander B Barnes
- Physical Chemistry, ETH Zurich, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland; Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, United States.
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5
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Judge PT, Sesti EL, Price LE, Albert BJ, Alaniva N, Saliba EP, Halbritter T, Sigurdsson ST, Kyei GB, Barnes AB. Dynamic Nuclear Polarization with Electron Decoupling in Intact Human Cells and Cell Lysates. J Phys Chem B 2020; 124:2323-2330. [DOI: 10.1021/acs.jpcb.9b10494] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Patrick T. Judge
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
- Department of Biochemistry, Biophysics & Structural Biology, Washington University in St. Louis, St. Louis, Missouri 63110, United States
| | - Erika L. Sesti
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
| | - Lauren E. Price
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
| | - Brice J. Albert
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
| | - Nicholas Alaniva
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
| | - Edward P. Saliba
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
| | - Thomas Halbritter
- Department of Chemistry, Science Institute, University of Iceland, Dunhaga 3, 107 Reykjavik, Iceland
| | - Snorri Th. Sigurdsson
- Department of Chemistry, Science Institute, University of Iceland, Dunhaga 3, 107 Reykjavik, Iceland
| | - George B. Kyei
- Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63130, United States
- Noguchi Memorial Institute for Medical Research, College of Health Sciences, University of Ghana,
Legon, Accra 02233, Ghana
| | - Alexander B. Barnes
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, United States
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6
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Gao C, Alaniva N, Saliba EP, Sesti EL, Judge PT, Scott FJ, Halbritter T, Sigurdsson ST, Barnes AB. Frequency-chirped dynamic nuclear polarization with magic angle spinning using a frequency-agile gyrotron. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2019; 308:106586. [PMID: 31525550 DOI: 10.1016/j.jmr.2019.106586] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Revised: 08/15/2019] [Accepted: 08/28/2019] [Indexed: 06/10/2023]
Abstract
We demonstrate that frequency-chirped dynamic nuclear polarization (DNP) with magic angle spinning (MAS) improves the enhancement of nuclear magnetic resonance (NMR) signal beyond that of continuous-wave (CW) DNP. Using a custom, frequency-agile gyrotron we implemented frequency-chirped DNP using the TEMTriPol-1 biradical, with MAS NMR at 7 T. Frequency-chirped microwaves yielded a DNP enhancement of 137, an increase of 19% compared to 115 recorded with CW. The chirps were 120 MHz-wide and centered over the trityl resonance, with 7 W microwave power incident on the sample (estimated 0.4 MHz electron spin Rabi frequency). We describe in detail the design and fabrication of the frequency-agile gyrotron used for frequency-chirped MAS DNP. Improvements to the interaction cavity and internal mode converter yielded efficient microwave generation and mode conversion, achieving >10 W output power over a 335 MHz bandwidth with >110 W peak power. Frequency-chirped DNP with MAS is expected to have a significant impact on the future of magnetic resonance.
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Affiliation(s)
- Chukun Gao
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, USA; Physical Chemistry, ETH-Zurich, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Nicholas Alaniva
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, USA; Physical Chemistry, ETH-Zurich, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Edward P Saliba
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, USA; Physical Chemistry, ETH-Zurich, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland
| | - Erika L Sesti
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, USA
| | - Patrick T Judge
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, USA; Department of Biochemistry, Biophysics & Structural Biology, Washington University in St. Louis, St. Louis, MO 63110, USA
| | - Faith J Scott
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, USA
| | - Thomas Halbritter
- University of Iceland, Department of Chemistry, Science Institute, Dunhaga 3, 107 Reykjavik, Iceland
| | - Snorri Th Sigurdsson
- University of Iceland, Department of Chemistry, Science Institute, Dunhaga 3, 107 Reykjavik, Iceland
| | - Alexander B Barnes
- Department of Chemistry, Washington University in St. Louis, St. Louis, MO 63130, USA; Physical Chemistry, ETH-Zurich, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland.
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7
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Saliba EP, Barnes AB. Fast electron paramagnetic resonance magic angle spinning simulations using analytical powder averaging techniques. J Chem Phys 2019; 151:114107. [PMID: 31542017 PMCID: PMC7043854 DOI: 10.1063/1.5113598] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2019] [Accepted: 08/27/2019] [Indexed: 11/14/2022] Open
Abstract
Simulations describing the spin physics underpinning nuclear magnetic resonance (NMR) and electron paramagnetic resonance (EPR) spectroscopy play an important role in the design of new experiments. When experiments are performed in the solid state, samples are commonly composed of powders or glasses, with molecules oriented at a large number of angles with respect to the laboratory frame. These powder angles must be represented in simulations to account for anisotropic interactions. Numerical techniques are typically used to accurately compute such powder averages. A large number of Euler angles are usually required, leading to lengthy simulation times. This is particularly true in broad spectra, such as those observed in EPR. The combination of the traditionally separate techniques of EPR and magic angle spinning (MAS) NMR could play an important role in future electron detected experiments, combined with dynamic nuclear polarization, which will allow for exceptional detection sensitivity of NMR spin coherences. Here, we present a method of reducing the required number of Euler angles in magnetic resonance simulations by analytically performing the powder average over one of the Euler angles in the static and MAS cases for the TEMPO nitroxide radical in a 7 T field. In the static case, this leads to a 97.5% reduction in simulation time over the fully numerical case and reproduces the expected spinning sideband manifold when simulated with a MAS frequency of 150 kHz. This technique is applicable to more traditional NMR experiments as well, such as those involving quadrupolar nuclei or multiple dimensions.
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Affiliation(s)
- Edward P Saliba
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, USA
| | - Alexander B Barnes
- Department of Chemistry, Washington University in St. Louis, St. Louis, Missouri 63130, USA
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8
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Rankin AGM, Trébosc J, Pourpoint F, Amoureux JP, Lafon O. Recent developments in MAS DNP-NMR of materials. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2019; 101:116-143. [PMID: 31189121 DOI: 10.1016/j.ssnmr.2019.05.009] [Citation(s) in RCA: 78] [Impact Index Per Article: 15.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2019] [Revised: 05/21/2019] [Accepted: 05/21/2019] [Indexed: 05/03/2023]
Abstract
Solid-state NMR spectroscopy is a powerful technique for the characterization of the atomic-level structure and dynamics of materials. Nevertheless, the use of this technique is often limited by its lack of sensitivity, which can prevent the observation of surfaces, defects or insensitive isotopes. Dynamic Nuclear Polarization (DNP) has been shown to improve by one to three orders of magnitude the sensitivity of NMR experiments on materials under Magic-Angle Spinning (MAS), at static magnetic field B0 ≥ 5 T, conditions allowing for the acquisition of high-resolution spectra. The field of DNP-NMR spectroscopy of materials has undergone a rapid development in the last ten years, spurred notably by the availability of commercial DNP-NMR systems. We provide here an in-depth overview of MAS DNP-NMR studies of materials at high B0 field. After a historical perspective of DNP of materials, we describe the DNP transfers under MAS, the transport of polarization by spin diffusion and the various contributions to the overall sensitivity of DNP-NMR experiments. We discuss the design of tailored polarizing agents and the sample preparation in the case of materials. We present the DNP-NMR hardware and the influence of key experimental parameters, such as microwave power, magnetic field, temperature and MAS frequency. We give an overview of the isotopes that have been detected by this technique, and the NMR methods that have been combined with DNP. Finally, we show how MAS DNP-NMR has been applied to gain new insights into the structure of organic, hybrid and inorganic materials with applications in fields, such as health, energy, catalysis, optoelectronics etc.
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Affiliation(s)
- Andrew G M Rankin
- Univ. Lille, CNRS, Centrale Lille, ENSCL, Univ. Artois, UMR 8181, UCCS, Unité de Catalyse et Chimie du Solide, F-59000, Lille, France
| | - Julien Trébosc
- Univ. Lille, CNRS, Centrale Lille, ENSCL, Univ. Artois, UMR 8181, UCCS, Unité de Catalyse et Chimie du Solide, F-59000, Lille, France; Univ. Lille, CNRS-FR2638, Fédération Chevreul, F-59000 Lille, France
| | - Frédérique Pourpoint
- Univ. Lille, CNRS, Centrale Lille, ENSCL, Univ. Artois, UMR 8181, UCCS, Unité de Catalyse et Chimie du Solide, F-59000, Lille, France
| | - Jean-Paul Amoureux
- Univ. Lille, CNRS, Centrale Lille, ENSCL, Univ. Artois, UMR 8181, UCCS, Unité de Catalyse et Chimie du Solide, F-59000, Lille, France; Bruker Biospin, 34 rue de l'industrie, F-67166, Wissembourg, France
| | - Olivier Lafon
- Univ. Lille, CNRS, Centrale Lille, ENSCL, Univ. Artois, UMR 8181, UCCS, Unité de Catalyse et Chimie du Solide, F-59000, Lille, France; Institut Universitaire de France, 1 rue Descartes, F-75231, Paris, France.
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9
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Smith AN, Märker K, Hediger S, De Paëpe G. Natural Isotopic Abundance 13C and 15N Multidimensional Solid-State NMR Enabled by Dynamic Nuclear Polarization. J Phys Chem Lett 2019; 10:4652-4662. [PMID: 31361489 DOI: 10.1021/acs.jpclett.8b03874] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Dynamic nuclear polarization (DNP) has made feasible solid-state NMR experiments that were previously thought impractical due to sensitivity limitations. One such class of experiments is the structural characterization of organic and biological samples at natural isotopic abundance (NA). Herein, we describe the many advantages of DNP-enabled ssNMR at NA, including the extraction of long-range distance constraints using dipolar recoupling pulse sequences without the deleterious effects of dipolar truncation. In addition to the theoretical underpinnings in the analysis of these types of experiments, numerous applications of DNP-enabled ssNMR at NA are discussed.
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Affiliation(s)
- Adam N Smith
- Univ. Grenoble Alpes, CEA, CNRS, IRIG, MEM , F-38000 Grenoble , France
| | - Katharina Märker
- Univ. Grenoble Alpes, CEA, CNRS, IRIG, MEM , F-38000 Grenoble , France
| | - Sabine Hediger
- Univ. Grenoble Alpes, CEA, CNRS, IRIG, MEM , F-38000 Grenoble , France
| | - Gaël De Paëpe
- Univ. Grenoble Alpes, CEA, CNRS, IRIG, MEM , F-38000 Grenoble , France
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10
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Judge PT, Sesti EL, Saliba EP, Alaniva N, Halbritter T, Sigurdsson ST, Barnes AB. Sensitivity analysis of magic angle spinning dynamic nuclear polarization below 6 K. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2019; 305:51-57. [PMID: 31212198 DOI: 10.1016/j.jmr.2019.05.011] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2019] [Revised: 05/28/2019] [Accepted: 05/30/2019] [Indexed: 06/09/2023]
Abstract
Dynamic nuclear polarization (DNP) improves signal-to-noise in nuclear magnetic resonance (NMR) spectroscopy. Signal-to-noise in NMR can be further improved with cryogenic sample cooling. Whereas MAS DNP is commonly performed between 25 and 110 K, sample temperatures below 6 K lead to further improvements in sensitivity. Here, we demonstrate that solid effect MAS DNP experiments at 6 K, using trityl, yield 3.2× more sensitivity compared to 90 K. Trityl with solid effect DNP at 6 K yields substantially more signal to noise than biradicals and cross effect DNP. We also characterize cross effect DNP with AMUPol and TEMTriPol-1 biradicals for DNP magic angle spinning at temperatures below 6 K and 7 Tesla. DNP enhancements determined from microwave on/off intensities are 253 from AMUPol and 49 from TEMTriPol-1. The higher thermal Boltzmann polarization at 6 K compared to 298 K, combined with these enhancements, should result in 10,000× signal gain for AMUPol and 2000× gain for TEMTriPol-1. However, we show that AMUPol reduces signal in the absence of microwaves by 90% compared to 41% by TEMTriPol-1 at 7 Tesla as the result of depolarization and other detrimental paramagnetic effects. AMUPol still yields the highest signal-to-noise improvement per unit time between the cross effect radicals due to faster polarization buildup (T1DNP = 4.3 s and 36 s for AMUPol and TEMTriPol-1, respectively). Overall, AMUPol results in 2.5× better sensitivity compared to TEMTriPol-1 in MAS DNP experiments performed below 6 K at 7 T. Trityl provides 6.0× more sensitivity than TEMTriPol-1 and 1.9× more than AMUPol at 6 K, thus yielding the greatest signal-to-noise per unit time among all three radicals. A DNP enhancement profile of TEMTriPol-1 recorded with a frequency-tunable custom-built gyrotron oscillator operating at 198 GHz is also included. It is determined that at 7 T below 6 K a microwave power level of 0.6 W incident on the sample is sufficient to saturate the cross effect mechanism using TEMTriPol-1, yet increasing the power level up to 5 W results in higher improvements in DNP sensitivity with AMUPol. These results indicate MAS DNP below 6 K will play a prominent role in ultra-sensitive NMR spectroscopy in the future.
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Affiliation(s)
- Patrick T Judge
- Department of Chemistry, Washington University in St. Louis, One Brookings Drive, St. Louis, MO 63130, USA; Department of Biochemistry, Biophysics & Structural Biology, Washington University in St. Louis, St. Louis, MO 63110, USA
| | - Erika L Sesti
- Department of Chemistry, Washington University in St. Louis, One Brookings Drive, St. Louis, MO 63130, USA
| | - Edward P Saliba
- Department of Chemistry, Washington University in St. Louis, One Brookings Drive, St. Louis, MO 63130, USA
| | - Nicholas Alaniva
- Department of Chemistry, Washington University in St. Louis, One Brookings Drive, St. Louis, MO 63130, USA
| | - Thomas Halbritter
- Department of Chemistry, University of Iceland, Science Institute, Dunhaga 3, 107 Reykjavik, Iceland
| | - Snorri Th Sigurdsson
- Department of Chemistry, University of Iceland, Science Institute, Dunhaga 3, 107 Reykjavik, Iceland
| | - Alexander B Barnes
- Department of Chemistry, Washington University in St. Louis, One Brookings Drive, St. Louis, MO 63130, USA.
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11
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Jaudzems K, Polenova T, Pintacuda G, Oschkinat H, Lesage A. DNP NMR of biomolecular assemblies. J Struct Biol 2018; 206:90-98. [PMID: 30273657 DOI: 10.1016/j.jsb.2018.09.011] [Citation(s) in RCA: 58] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2018] [Revised: 09/13/2018] [Accepted: 09/27/2018] [Indexed: 11/30/2022]
Abstract
Dynamic Nuclear Polarization (DNP) is an effective approach to alleviate the inherently low sensitivity of solid-state NMR (ssNMR) under magic angle spinning (MAS) towards large-sized multi-domain complexes and assemblies. DNP relies on a polarization transfer at cryogenic temperatures from unpaired electrons to adjacent nuclei upon continuous microwave irradiation. This is usually made possible via the addition in the sample of a polarizing agent. The first pioneering experiments on biomolecular assemblies were reported in the early 2000s on bacteriophages and membrane proteins. Since then, DNP has experienced tremendous advances, with the development of extremely efficient polarizing agents or with the introduction of new microwaves sources, suitable for NMR experiments at very high magnetic fields (currently up to 900 MHz). After a brief introduction, several experimental aspects of DNP enhanced NMR spectroscopy applied to biomolecular assemblies are discussed. Recent demonstration experiments of the method on viral capsids, the type III and IV bacterial secretion systems, ribosome and membrane proteins are then described.
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Affiliation(s)
- Kristaps Jaudzems
- Centre de RMN à Très Hauts Champs, Institut des Sciences Analytiques (UMR 5280 - CNRS, ENS Lyon, UCB Lyon 1), Université de Lyon, 5 rue de la Doua, 69100 Villeurbanne, France
| | - Tatyana Polenova
- Department of Chemistry and Biochemistry, University of Delaware, 163 The Green, DE 19716, USA
| | - Guido Pintacuda
- Centre de RMN à Très Hauts Champs, Institut des Sciences Analytiques (UMR 5280 - CNRS, ENS Lyon, UCB Lyon 1), Université de Lyon, 5 rue de la Doua, 69100 Villeurbanne, France
| | - Hartmut Oschkinat
- Leibniz-Forschungsinstitut für Molekulare Pharmakologie im Forschungsverbund Berlin e.V. (FMP), Campus Berlin-Buch Robert-Roessle-Str. 10 13125 Berlin, Germany
| | - Anne Lesage
- Centre de RMN à Très Hauts Champs, Institut des Sciences Analytiques (UMR 5280 - CNRS, ENS Lyon, UCB Lyon 1), Université de Lyon, 5 rue de la Doua, 69100 Villeurbanne, France
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