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Yong JRJ, Kupče Ē, Claridge TDW. The NOAH HSQC-COSY module revisited: A theoretical and practical comparison of pulse sequences. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2024; 367:107759. [PMID: 39216461 DOI: 10.1016/j.jmr.2024.107759] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2024] [Revised: 08/19/2024] [Accepted: 08/21/2024] [Indexed: 09/04/2024]
Abstract
NMR supersequences, as exemplified by the NOAH (NMR by Ordered Acquisition using 1H detection) technique, are a powerful way of acquiring multiple 2D data sets in much shorter durations. This is accomplished through targeted excitation and detection of the magnetisation belonging to specific isotopologues ('magnetisation pools'). Separately, the HSQC-COSY experiment has recently seen an increase in popularity due to the high signal dispersion in the indirect dimension and the removal of ambiguity traditionally associated with HSQC-TOCSY experiments. Here, we describe how the HSQC-COSY experiment can be integrated as a 'module' within NOAH supersequences. The benefits and drawbacks of several different pulse sequence implementations are discussed, with a particular focus on how sensitivities of other modules in the same supersequence are affected.
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Affiliation(s)
- Jonathan R J Yong
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom; The Alan Turing Institute, The British Library, 96 Euston Road, London NW1 2DB, United Kingdom(1)
| | - Ēriks Kupče
- Bruker UK Ltd, R&D, Coventry CV4 9GH, United Kingdom; Latvian Academy of Sciences, Akadēmijas Laukums 1, Riga LV-1050, Latvia(1)
| | - Tim D W Claridge
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom; Exscientia, The Schrödinger Building, Oxford Science Park, Oxford OX4 4GE, United Kingdom(1).
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2
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Sengupta S, Schüler P, Liebing P, Westerhausen M. Synthesis of Sterically Encumbered Alkaline-Earth Metal Amides Applying the In Situ Grignard Reagent Formation. Chemistry 2023; 29:e202300035. [PMID: 36734181 DOI: 10.1002/chem.202300035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Revised: 02/01/2023] [Accepted: 02/02/2023] [Indexed: 02/04/2023]
Abstract
Magnesium and calcium are too inert to deprotonate amines directly. For the synthesis of bulky amides alternative strategies are required and in the past, N-bound trialkylsilyl groups have been used to ease metalation reactions. The in situ Grignard reagent formation in stirred suspensions of magnesium or calcium with hydryl halide and imine in THF allows the synthesis of a plethora of amides with bulky silyl-free substituents. Ball milling protocols partially favor competitive side reactions such as aza-pinacol coupling reactions. Calcium is the advantageous choice for the in situ Grignard reagent formation and subsequent addition onto the imines yielding bulky calcium bis(amides) whereas the stronger reducing heavier alkaline-earth metals strontium and barium are less selective and hence, the aza-pinacol coupling reaction becomes competitive. Exemplary, the solid-state molecular structures of [(Et2 O)Mg(N(Ph)(CHPh2 )2 ] and [(Et2 O)2 Ca(N(Ph)(CHPh2 )2 ] have been determined.
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Affiliation(s)
- Simon Sengupta
- Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Humboldtstraße 8, 07743, Jena, Germany
| | - Philipp Schüler
- Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Humboldtstraße 8, 07743, Jena, Germany
| | - Phil Liebing
- Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Humboldtstraße 8, 07743, Jena, Germany
| | - Matthias Westerhausen
- Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Humboldtstraße 8, 07743, Jena, Germany
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Sengupta S, Schüler P, Görls H, Liebing P, Krieck S, Westerhausen M. In Situ Grignard Metalation Method for the Synthesis of Hauser Bases. Chemistry 2022; 28:e202201359. [PMID: 35686618 PMCID: PMC9546396 DOI: 10.1002/chem.202201359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Indexed: 12/03/2022]
Abstract
The in situ Grignard Metalation Method (iGMM) is a straightforward one-pot procedure to quickly produce multigram amounts of Hauser bases R2 N-MgBr which are valuable and vastly used metalation reagents and novel electrolytes for magnesium batteries. During addition of bromoethane to a suspension of Mg metal and secondary amine at room temperature in an ethereal solvent, a smooth reaction yields R2 N-MgBr under evolution of ethane within a few hours. A Schlenk equilibrium is operative, interconverting the Hauser bases into their solvated homoleptic congeners Mg(NR2 )2 and MgBr2 depending on the solvent. Scope and preconditions are studied, and side reactions limiting the yield have been investigated. DOSY NMR experiments and X-ray crystal structures of characteristic examples clarify aggregation in solution and the solid state.
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Affiliation(s)
- Simon Sengupta
- Institute of Inorganic and Analytical ChemistryFriedrich Schiller University JenaHumboldtstraße 807743JenaGermany
| | - Philipp Schüler
- Institute of Inorganic and Analytical ChemistryFriedrich Schiller University JenaHumboldtstraße 807743JenaGermany
| | - Helmar Görls
- Institute of Inorganic and Analytical ChemistryFriedrich Schiller University JenaHumboldtstraße 807743JenaGermany
| | - Phil Liebing
- Institute of Inorganic and Analytical ChemistryFriedrich Schiller University JenaHumboldtstraße 807743JenaGermany
| | - Sven Krieck
- Institute of Inorganic and Analytical ChemistryFriedrich Schiller University JenaHumboldtstraße 807743JenaGermany
| | - Matthias Westerhausen
- Institute of Inorganic and Analytical ChemistryFriedrich Schiller University JenaHumboldtstraße 807743JenaGermany
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Timári I, Nagy TM, Kövér KE, Sørensen OW. Synergy and sensitivity-balance in concatenating experiments in NO relaxation delay NMR (NORD). Chem Commun (Camb) 2022; 58:2516-2519. [PMID: 35094037 DOI: 10.1039/d1cc06663c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The NMR experiment design strategy of NO Relaxation Delay (NORD), introduced mostly as an idealized theoretical approach, is extended and put to practical use by considering synergy and sensitivity-balance in concatenation of experiments. It is illustrated by a novel experiment, NORD {HMBC}-{HSQC}-{TOCSY}, where magnetization of non-13C attached protons effectively is channeled from the TOCSY spectrum toward primarily the least sensitive spectrum of HMBC. The experiment is expected to find its place as a full-package NMR method for metabolomics, carbohydrates, peptides and small-molecules in general.
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Affiliation(s)
- István Timári
- Department of Organic Chemistry, University of Debrecen, Egyetem tér 1, Debrecen H-4032, Hungary
| | - Tamás Milán Nagy
- Department of Inorganic and Analytical Chemistry, University of Debrecen, Egyetem tér 1, Debrecen H-4032, Hungary.,MTA-DE Molecular Recognition and Interaction Research Group, University of Debrecen, Egyetem tér 1, Debrecen H-4032, Hungary.
| | - Katalin E Kövér
- Department of Inorganic and Analytical Chemistry, University of Debrecen, Egyetem tér 1, Debrecen H-4032, Hungary.,MTA-DE Molecular Recognition and Interaction Research Group, University of Debrecen, Egyetem tér 1, Debrecen H-4032, Hungary.
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Abstract
![]()
NMR
supersequences allow multiple 2D NMR data sets to be acquired
in greatly reduced experiment durations through tailored detection
of NMR responses within concatenated modules. In NOAH (NMR by Ordered
Acquisition using 1H detection) experiments, up to five
modules can be combined (or even more when parallel modules are employed),
which in theory leads to thousands of plausible supersequences. However,
constructing a pulse program for a supersequence is highly time-consuming,
requires specialized knowledge, and is error-prone due to its complexity;
this has prevented the true potential of the NOAH concept from being
fully realized. We introduce here an online tool named GENESIS (GENEration
of Supersequences In Silico), available via https://nmr-genesis.co.uk,
which systematically generates pulse programs for arbitrary NOAH supersequences
compatible with Bruker spectrometers. The GENESIS website provides
a unified “one-stop” interface where users may obtain
customized supersequences for specific applications, together with
all associated acquisition and processing scripts, as well as detailed
instructions for running NOAH experiments. Furthermore, it enables
the rapid dissemination of new developments in NOAH sequences, such
as new modules or improvements to existing modules. Here, we present
several such enhancements, including options for solvent suppression,
new modules based on pure shift NMR, and improved artifact reduction
in HMBC and HMQC modules.
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Affiliation(s)
- Jonathan R J Yong
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - E Riks Kupče
- Bruker UK Ltd, R&D, Coventry CV4 9GH, United Kingdom
| | - Tim D W Claridge
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
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Kupče Ē, Yong JRJ, Widmalm G, Claridge TDW. Parallel NMR Supersequences: Ten Spectra in a Single Measurement. JACS AU 2021; 1:1892-1897. [PMID: 34841408 PMCID: PMC8611666 DOI: 10.1021/jacsau.1c00423] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2021] [Indexed: 05/05/2023]
Abstract
The principles employed in parallel NMR and MRI are applied to NMR supersequences yielding as many as ten 2D NMR spectra in one measurement. We present a number of examples where two NOAH (NMR by Ordered Acquisition using 1H-detection) supersequences are recorded in parallel, thus dramatically increasing the information content obtained in a single NMR experiment. The two parallel supersequences entangled by time-sharing schemes (IPAP-seHSQC, HSQC-COSY, and HSQC-TOCSY) incorporate also modified (sequential and/or interleaved) conventional pulse schemes (modules), including HMBC, TOCSY, COSY, CLIP-COSY, NOESY, and ROESY. Such parallel supersequences can be tailored for specific applications, for instance, the analysis and characterization of molecular structure of complex organic molecules from a single measurement. In particular, the CASPER software was used to establish the structure of a tetrasaccharide, β-LNnTOMe, with a high degree of confidence from a single measurement involving a parallel NOAH-5 supersequence.
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Affiliation(s)
- Ēriks Kupče
- Bruker
UK Ltd, R&D, Banner
Lane, Coventry CV4 9GH, United Kingdom
| | - Jonathan R. J. Yong
- Department
of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United
Kingdom
| | - Göran Widmalm
- Department
of Organic Chemistry, Arrhenius Laboratory, Stockholm University, S-106 91 Stockholm, Sweden
| | - Tim D. W. Claridge
- Department
of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, United
Kingdom
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