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Unveiling the Secretome of the Fungal Plant Pathogen Neofusicoccum parvum Induced by In Vitro Host Mimicry. J Fungi (Basel) 2022; 8:jof8090971. [PMID: 36135697 PMCID: PMC9505667 DOI: 10.3390/jof8090971] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Revised: 09/10/2022] [Accepted: 09/14/2022] [Indexed: 11/16/2022] Open
Abstract
Neofusicoccum parvum is a fungal plant pathogen of a wide range of hosts but knowledge about the virulence factors of N. parvum and host-pathogen interactions is rather limited. The molecules involved in the interaction between N. parvum and Eucalyptus are mostly unknown, so we used a multi-omics approach to understand pathogen-host interactions. We present the first comprehensive characterization of the in vitro secretome of N. parvum and a prediction of protein-protein interactions using a dry-lab non-targeted interactomics strategy. We used LC-MS to identify N. parvum protein profiles, resulting in the identification of over 400 proteins, from which 117 had a different abundance in the presence of the Eucalyptus stem. Most of the more abundant proteins under host mimicry are involved in plant cell wall degradation (targeting pectin and hemicellulose) consistent with pathogen growth on a plant host. Other proteins identified are involved in adhesion to host tissues, penetration, pathogenesis, or reactive oxygen species generation, involving ribonuclease/ribotoxin domains, putative ricin B lectins, and necrosis elicitors. The overexpression of chitosan synthesis proteins during interaction with the Eucalyptus stem reinforces the hypothesis of an infection strategy involving pathogen masking to avoid host defenses. Neofusicoccum parvum has the molecular apparatus to colonize the host but also actively feed on its living cells and induce necrosis suggesting that this species has a hemibiotrophic lifestyle.
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Eucalypt Recruitment and Invasion Potential in Protected Areas of the Iberian Peninsula under Current and Future Climate Conditions. FORESTS 2022. [DOI: 10.3390/f13081199] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Eucalyptus globulus Labill. stands have been expanding in protected areas (sites) of the Natura 2000 network in the Iberian Peninsula (Iberia). This expansion is mostly human-driven, but there is increasing evidence of plant recruitment and escape from cultivation areas. Therefore, it is important to assess the recruitment and invasion potential of sites and associated habitats and how future climate may change this potential. Here, we use SDMs to project current and future climatic suitability for E. globulus recruitment in Iberia and combine this suitability with local factors to rate the current recruitment potential of eucalypt stands. This potential is then extrapolated to neighbour areas in Natura 2000 sites to assess the invasion potential. The results show a wide recruitment range along coastal regions of western and northern Iberia (83,275 km2) and a northward contraction under climate change, similar to the trend projected for plantation suitability. Recruitment potential of any level was identified in 989 km2, while invasion potential was identified in 878 km2 across 176 Natura 2000 sites. Heathlands and riparian forests were associated with the largest recruitment and invasion potential areas. This study may help in preventing further negative impacts in protected areas and habitats already affected by E. globulus expansion.
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Figueiredo-Vázquez C, Lourenço A, Velo-Antón G. Riverine barriers to gene flow in a salamander with both aquatic and terrestrial reproduction. Evol Ecol 2021. [DOI: 10.1007/s10682-021-10114-z] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Modelling Maritime Pine (Pinus pinaster Aiton) Spatial Distribution and Productivity in Portugal: Tools for Forest Management. FORESTS 2021. [DOI: 10.3390/f12030368] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Research Highlights: Modelling species’ distribution and productivity is key to support integrated landscape planning, species’ afforestation, and sustainable forest management. Background and Objectives: Maritime pine (Pinus pinaster Aiton) forests in Portugal were lately affected by wildfires and measures to overcome this situation are needed. The aims of this study were: (1) to model species’ spatial distribution and productivity using a machine learning (ML) regression approach to produce current species’ distribution and productivity maps; (2) to model the species’ spatial productivity using a stochastic sequential simulation approach to produce the species’ current productivity map; (3) to produce the species’ potential distribution map, by using a ML classification approach to define species’ ecological envelope thresholds; and (4) to identify present and future key factors for the species’ afforestation and management. Materials and Methods: Spatial land cover/land use data, inventory, and environmental data (climate, topography, and soil) were used in a coupled ML regression and stochastic sequential simulation approaches to model species’ current and potential distributions and productivity. Results: Maritime pine spatial distribution modelling by the ML approach provided 69% fitting efficiency, while species productivity modelling achieved only 43%. The species’ potential area covered 60% of the country’s area, where 78% of the species’ forest inventory plots (1995) were found. The change in the Maritime pine stands’ age structure observed in the last decades is causing the species’ recovery by natural regeneration to be at risk. Conclusions: The maps produced allow for best site identification for species afforestation, wood production regulation support, landscape planning considering species’ diversity, and fire hazard mitigation. These maps were obtained by modelling using environmental covariates, such as climate attributes, so their projection in future climate change scenarios can be performed.
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Abstract
Several eucalypt species are known for their capacity to massively regenerate through seeds in recently burned areas, becoming an ecological problem in regions where the species is not native. Here we study the demography and the development of highly dense Eucalyptus globulus wildling populations established one year after a fire and test two methods to control these populations. We monitored five mixed E. globulus stands across one year, in Central Portugal. We established a set of plots in each stand, with three treatments: mechanical cutting, herbicide spraying and no disturbance (control plots). Herbicide was applied in four concentrations. We tagged randomly selected plants in the control plots to monitor their growth. The initial mean wildling density was 322,000 plants ha−1, the highest ever recorded in the introduced range. Wildling density was significantly dependent on the density of surrounding adult E. globulus trees. Wildling density in control plots decreased 30% in one year, although showing positive variations over time because of new recruitment. Despite seasonal growth differences, wildlings showed a high growth rate throughout the year, reaching 15.6 cm month−1 in the summer. The growth rate of tagged wildings was positively affected by solar radiation and negatively affected by evapotranspiration and maximum temperature. Mechanical cutting reduced wildling density by 97% while herbicide treatment reduced density between 80% (for the lowest concentration) and 99% (for the highest concentration). Herbicide-treated plants were more likely to resprout than cut plants. Regardless of the control method adopted (cutting or herbicide), management strategies should include the follow-up of the treated areas, to detect the establishment of new recruits and resprouting.
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Ecological corridors for the amphibians and reptiles in the Natura 2000 sites of Romania. Sci Rep 2020; 10:19464. [PMID: 33173154 PMCID: PMC7655805 DOI: 10.1038/s41598-020-76596-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Accepted: 10/30/2020] [Indexed: 11/08/2022] Open
Abstract
Landscape heterogeneity and fragmentation are key challenges for biodiversity conservation. As Earth’s landscape is increasingly dominated by anthropogenic land use, it is clear that broad-scale systems of nature reserves connected by corridors are needed to enable the dispersal of flora and fauna. The European Union currently supports a continent-wide network of protected areas, the Natura 2000 program, but this program lacks the necessary connectivity component. To examine whether a comprehensive network could be built in order to protect amphibians and reptiles, two taxonomic groups sensitive to environmental changes due to their physiological constrains and low dispersal capacity, we used species’ distribution maps, the sites of community interest (SCIs) in Romania, and landscape resistance rasters. Except Vipera ursinii rakosiensis, all amphibians and reptiles had corridors mapped that, when assembled, provided linkages for up to 27 species. Natura 2000 species were not good candidates for umbrella species as these linkages covered only 17% of the corridors for all species. Important Areas for Connectivity were identified in the Carpathian Mountains and along the Danube River, further confirming these regions as hot spots for biodiversity in Europe, where successful linkages are most likely. In the end, while such corridors may not be created just for amphibians and reptiles, they can easily be incorporated into more complex linkages with corridors for more charismatic species, therefore enhancing the corridors’ value in terms of quality and structure.
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Biber P, Felton A, Nieuwenhuis M, Lindbladh M, Black K, Bahýl' J, Bingöl Ö, Borges JG, Botequim B, Brukas V, Bugalho MN, Corradini G, Eriksson LO, Forsell N, Hengeveld GM, Hoogstra-Klein MA, Kadıoǧulları Aİ, Karahalil U, Lodin I, Lundholm A, Makrickienė E, Masiero M, Mozgeris G, Pivoriūnas N, Poschenrieder W, Pretzsch H, Sedmák R, Tuček J. Forest Biodiversity, Carbon Sequestration, and Wood Production: Modeling Synergies and Trade-Offs for Ten Forest Landscapes Across Europe. Front Ecol Evol 2020. [DOI: 10.3389/fevo.2020.547696] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Species Ecological Envelopes under Climate Change Scenarios: A Case Study for the Main Two Wood-Production Forest Species in Portugal. FORESTS 2020. [DOI: 10.3390/f11080880] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Species ecological envelope maps were obtained for the two main Portuguese wood-production species (Eucalyptus globulus Labill. and Pinus pinaster Aiton) and projected future climate change scenarios. A machine learning approach was used to understand the most influential environmental variables that may explain current species distribution and productivity. Background and Objectives: The aims of the study were: (1) to map species potential suitability areas using ecological envelopes in the present and to project them in the future under climate change scenarios; (2) to map species current distributions; (3) to map species current productivity; and (4) to explore the most influential environmental variables on species current distribution and productivity. Materials and Methods: Climate, elevation data, and soil data sets were used to obtain present and future species ecological envelopes under two climate change scenarios. The official land cover maps were used to map species distributions. Forest inventory data were used to map the species productivity by geostatistical techniques. A Bayesian machine learning approach, supported by species distributions and productivity data, was used to explore the most influential environmental variables on species distribution and productivity and to validate species ecological envelopes. Results: The species ecological envelope methodology was found to be robust. Species’ ecological envelopes showed a high potential for both species’ afforestation. In the future, a decrease in the country’s area potentiality was forecasted for both species. The distribution of maritime pine was found to be mainly determined by precipitation-related variables, but the elevation and temperature-related variables were very important to differentiate species productivity. For eucalypts, species distribution was mainly explained by temperature-related variables, as well as the species productivity. Conclusions: These findings are key to support recommendations for future afforestation and will bring value to policy-makers and environmental authorities in policy formulation under climate change scenarios.
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Pereira P. Ecosystem services in a changing environment. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 702:135008. [PMID: 31733548 DOI: 10.1016/j.scitotenv.2019.135008] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2019] [Accepted: 10/14/2019] [Indexed: 05/22/2023]
Affiliation(s)
- Paulo Pereira
- Environmental Management Center, Mykolas Romeris University, Ateities g. 20, LT-08303 Vilnius, Lithuania.
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Fernandes PM, Guiomar N, Rossa CG. Analysing eucalypt expansion in Portugal as a fire-regime modifier. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 666:79-88. [PMID: 30797129 DOI: 10.1016/j.scitotenv.2019.02.237] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2019] [Revised: 02/13/2019] [Accepted: 02/15/2019] [Indexed: 06/09/2023]
Abstract
Eucalypts, especially blue gum (Eucalyptus globulus), have been extensively planted in Portugal and nowadays dominate most of its forest landscapes. Large-scale forestation programs can intensify fire activity, and blue gum plantations are often viewed as highly flammable due to the nature and structure of the fuel complex. The role of eucalypt plantations in the fire regime of Mediterranean climate regions is increasingly debated following the recent catastrophic wildfires in Portugal and elsewhere. In this study we examined the effects of eucalypt forestation on burned area (BA), fire size, and fire severity in Portugal. This was based on fire and vegetation mapping and statistics, fire weather data, satellite imagery, and national forest inventory data. Eucalypt BA comprised an average of 12.5% of total BA (1980-2017) and did not increase over time and with eucalypt expansion. Eucalypt metrics did not explain interannual BA variability after accounting for the effects of other variables. Forest fires started within eucalypt stands were the least likely to become large, and large fire size was irresponsive to forest composition. Likewise, forest type was a generally minor influence in mega-fire severity and accounted for just 1.4-8.6% of surface fuel-hazard metrics variation. In general, large-scale conversion of maritime pine to eucalypt stands (1970-2015) implied lower fuel accumulation. Fire activity results are consistent with fuel hazard results and express trade-offs between short-rotation forestry and fire behaviour in blue gum stands, with high spotting potential versus modest crown fire likelihood. We found no support for the contention of a modified fire regime as a result of eucalypt forestation in Portugal, but the rising undermanaged and abandoned blue gum estate, especially after large-fire seasons, is a concern for the future. However, it remains to be determined whether post-fire eucalypt regrowth is a higher fire threat than native vegetation in the same context.
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Affiliation(s)
- Paulo M Fernandes
- Centro de Investigação e de Tecnologias Agroambientais e Biológicas (CITAB), Universidade de Trás-os-Montes e Alto Douro, Quinta dos Prados, 5001-801 Vila Real, Portugal.
| | - Nuno Guiomar
- ICAAM-Instituto de Ciências Agrárias e Ambientais Mediterrânicas, Universidade de Évora, Ap. 94, 7002-554 Évora, Portugal.
| | - Carlos G Rossa
- Centro de Investigação e de Tecnologias Agroambientais e Biológicas (CITAB), Universidade de Trás-os-Montes e Alto Douro, Quinta dos Prados, 5001-801 Vila Real, Portugal
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Deus E, Silva JS, Larcombe MJ, Catry FX, Queirós L, dos Santos P, Matias H, Águas A, Rego FC. Investigating the invasiveness of Eucalyptus globulus in Portugal: site-scale drivers, reproductive capacity and dispersal potential. Biol Invasions 2019. [DOI: 10.1007/s10530-019-01954-6] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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