1
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Sondag D, Heming JJA, Löwik DWPM, Krivosheeva E, Lejeune D, van Geffen M, van’t Veer C, van Heerde WL, Beens MCJ, Kuijpers BHM, Boltje TJ, Rutjes FPJT. Solid-Phase Synthesis of Caged Luminescent Peptides via Side Chain Anchoring. Bioconjug Chem 2023; 34:2234-2242. [PMID: 38055970 PMCID: PMC10739589 DOI: 10.1021/acs.bioconjchem.3c00381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 11/19/2023] [Accepted: 11/20/2023] [Indexed: 12/08/2023]
Abstract
The synthesis of caged luminescent peptide substrates remains challenging, especially when libraries of the substrates are required. Most currently available synthetic methods rely on a solution-phase approach, which is less suited for parallel synthesis purposes. We herein present a solid-phase peptide synthesis (SPPS) method for the synthesis of caged aminoluciferin peptides via side chain anchoring of the P1 residue. After the synthesis of a preliminary test library consisting of 40 compounds, the synthetic method was validated and optimized for up to >100 g of resin. Subsequently, two separate larger peptide libraries were synthesized either having a P1 = lysine or arginine residue containing in total 719 novel peptide substrates. The use of a more stable caged nitrile precursor instead of caged aminoluciferin rendered our parallel synthetic approach completely suitable for SPPS and serine protease profiling was demonstrated using late-stage aminoluciferin generation.
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Affiliation(s)
- Daan Sondag
- Institute
for Molecules and Materials, Radboud University, Nijmegen 6525 AJ, The Netherlands
| | - Jurriaan J. A. Heming
- Institute
for Molecules and Materials, Radboud University, Nijmegen 6525 AJ, The Netherlands
| | - Dennis W. P. M. Löwik
- Institute
for Molecules and Materials, Radboud University, Nijmegen 6525 AJ, The Netherlands
| | - Elena Krivosheeva
- Enzyre
BV, Novio Tech Campus,
Transistorweg 5-i, Nijmegen 6534 AT, The Netherlands
| | - Denise Lejeune
- Institute
for Molecules and Materials, Radboud University, Nijmegen 6525 AJ, The Netherlands
- Enzyre
BV, Novio Tech Campus,
Transistorweg 5-i, Nijmegen 6534 AT, The Netherlands
| | - Mark van Geffen
- Enzyre
BV, Novio Tech Campus,
Transistorweg 5-i, Nijmegen 6534 AT, The Netherlands
| | - Cornelis van’t Veer
- Enzyre
BV, Novio Tech Campus,
Transistorweg 5-i, Nijmegen 6534 AT, The Netherlands
| | - Waander L. van Heerde
- Enzyre
BV, Novio Tech Campus,
Transistorweg 5-i, Nijmegen 6534 AT, The Netherlands
- Department
of Haematology, Radboud University Medical
Centre, Nijmegen 6525 GA, The Netherlands
- Haemophilia
Treatment Centre, Nijmegen Eindhoven Maastricht
(HTC-NEM), Nijmegen 6525 GA, The Netherlands
| | | | | | - Thomas J. Boltje
- Institute
for Molecules and Materials, Radboud University, Nijmegen 6525 AJ, The Netherlands
| | - Floris P. J. T. Rutjes
- Institute
for Molecules and Materials, Radboud University, Nijmegen 6525 AJ, The Netherlands
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2
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Srisa J, Tankam T, Sukwattanasinitt M, Wacharasindhu S. Micelle-Enabled One-Pot Guanidine Synthesis in Water Directly from Isothiocyanate using Hypervalent Iodine(III) Reagents under Mild Conditions. Chem Asian J 2019; 14:3335-3343. [PMID: 31397526 DOI: 10.1002/asia.201900982] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2019] [Indexed: 02/06/2023]
Abstract
In this work, we developed a one-pot synthesis of guanidine directly from isothiocyanate using DIB (diacetoxyiodobenzene) as a desulfurizing agent under micellar conditions in water. Our optimization study revealed that the use of 1 % TPGS-750-M as a surfactant with NaOH as an additive base at room temperature can convert a variety of isothiocyanates and amines into corresponding guanidines in excellent yields (69-95 %). This synthetic process in water can be applied to prepare guanidine at gram-scale quantity. Our aqueous micellar medium also demonstrated high reusability as the reaction can be performed for several cycles without losing its efficiency. The reaction is metal-free, utilizes water as solvent and practical (room temperature and open flask).
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Affiliation(s)
- Jakkrit Srisa
- Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.,Center of Excellence on Petrochemical and Materials Technology, Chulalongkorn University, Bangkok, Thailand
| | - Theeranon Tankam
- Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand
| | - Mongkol Sukwattanasinitt
- Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.,Nanotec-CU Center of Excellence on Food and Agriculture, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand
| | - Sumrit Wacharasindhu
- Center of Excellence on Petrochemical and Materials Technology, Chulalongkorn University, Bangkok, Thailand.,Nanotec-CU Center of Excellence on Food and Agriculture, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand
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3
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Rong HJ, Yang CF, Chen T, Xu ZG, Su TD, Wang YQ, Ning BK. Iodine-catalyzed guanylation of amines withN,N′-di-Boc-thiourea. Org Biomol Chem 2019; 17:9280-9283. [DOI: 10.1039/c9ob02014d] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Iodine-catalyzed guanylation of amines withN,N′-di-Boc-thiourea is especially useful for both electronically and sterically deactivated primary anilines.
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Affiliation(s)
- Hao-Jie Rong
- Modern Chemistry Research Institute of Xi'an
- Xi'an 710065
- China
- Department of Chemistry & Materials Science
- Northwest University
| | - Cui-Feng Yang
- Modern Chemistry Research Institute of Xi'an
- Xi'an 710065
- China
| | - Tao Chen
- Modern Chemistry Research Institute of Xi'an
- Xi'an 710065
- China
| | - Ze-Gang Xu
- Modern Chemistry Research Institute of Xi'an
- Xi'an 710065
- China
| | - Tian-Duo Su
- Modern Chemistry Research Institute of Xi'an
- Xi'an 710065
- China
| | - Yong-Qiang Wang
- Department of Chemistry & Materials Science
- Northwest University
- Xi'an 710069
- China
| | - Bin-Ke Ning
- Modern Chemistry Research Institute of Xi'an
- Xi'an 710065
- China
- State Key Laboratory of Fluorine & Nitrogen Chemicals
- Xi'an 710065
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4
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Kitamura M, Yuasa R, Van Vranken DL. Synthesis of the cyclic prenylguanidine nitensidine E using a palladium-catalyzed carbenylative amination. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2014.10.140] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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5
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Tahir S, Badshah A, Hussain RA. Guanidines from ‘toxic substances’ to compounds with multiple biological applications – Detailed outlook on synthetic procedures employed for the synthesis of guanidines. Bioorg Chem 2015; 59:39-79. [DOI: 10.1016/j.bioorg.2015.01.006] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2014] [Revised: 01/13/2015] [Accepted: 01/19/2015] [Indexed: 11/25/2022]
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6
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Shaw JW, Grayson DH, Rozas I. Synthesis of Guanidines and Some of Their Biological Applications. TOPICS IN HETEROCYCLIC CHEMISTRY 2015. [DOI: 10.1007/7081_2015_174] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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7
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Chen HM, Li G, Cao LH. An Expedient Synthesis of NovelN,N′-Diglycosylguanidine Derivatives in the Presence of Hg(II). J CHIN CHEM SOC-TAIP 2013. [DOI: 10.1002/jccs.200800071] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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8
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Copper(II) chloride promoted transformation of amines into guanidines and asymmetrical N,N′-disubstituted guanidines. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2013.05.070] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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9
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Zou L, Wang B, Mu H, Zhang H, Song Y, Qu J. Development of Tartaric Acid Derived Chiral Guanidines and Their Application to Catalytic Enantioselective α-Hydroxylation of β-Dicarbonyl Compounds. Org Lett 2013; 15:3106-9. [DOI: 10.1021/ol401306h] [Citation(s) in RCA: 85] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Liwei Zou
- State Key Laboratory of Fine Chemicals, School of Pharmaceutical Science and Technology, Dalian University of Technology, Dalian 116024, P. R. China
| | - Baomin Wang
- State Key Laboratory of Fine Chemicals, School of Pharmaceutical Science and Technology, Dalian University of Technology, Dalian 116024, P. R. China
| | - Hongfang Mu
- State Key Laboratory of Fine Chemicals, School of Pharmaceutical Science and Technology, Dalian University of Technology, Dalian 116024, P. R. China
| | - Huanrui Zhang
- State Key Laboratory of Fine Chemicals, School of Pharmaceutical Science and Technology, Dalian University of Technology, Dalian 116024, P. R. China
| | - Yuming Song
- State Key Laboratory of Fine Chemicals, School of Pharmaceutical Science and Technology, Dalian University of Technology, Dalian 116024, P. R. China
| | - Jingping Qu
- State Key Laboratory of Fine Chemicals, School of Pharmaceutical Science and Technology, Dalian University of Technology, Dalian 116024, P. R. China
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10
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Yeagley AA, Su Z, McCullough KD, Worthington RJ, Melander C. N-substituted 2-aminoimidazole inhibitors of MRSA biofilm formation accessed through direct 1,3-bis(tert-butoxycarbonyl)guanidine cyclization. Org Biomol Chem 2013; 11:130-7. [PMID: 23076976 DOI: 10.1039/c2ob26469b] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Antibiotic resistance is a significant problem and is compounded by the ability of many pathogenic bacteria to form biofilms. A library of N-substituted derivatives of a previously reported 2-aminoimidazole/triazole (2-AIT) biofilm modulator was constructed via α-bromoketone cyclization with 1,3-bis(tert-butoxycarbonyl)guanidine, followed by selective substitution. Several compounds exhibited the ability to inhibit biofilm formation by three strong biofilm forming strains of methicillin resistant Staphylococcus aureus (MRSA). Additionally, a number of members of this library exhibited synergistic activity with oxacillin against planktonic MRSA. Compounds with this type of dual activity have the potential to be used as adjuvants with conventional antibiotics.
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Affiliation(s)
- Andrew A Yeagley
- Department of Chemistry, North Carolina State University, Raleigh, USA
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11
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Preparation and characterization of ortho-biguanidinyl benzoyl chitosan hydrochloride and its antibacterial activities. Polym Bull (Berl) 2012. [DOI: 10.1007/s00289-012-0883-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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12
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Zhao-Sheng C, Yue-Ming S, Chun-Sheng Y, Xue-Mei Z. Preparation, characterization, and antibacterial activities of para-biguanidinyl benzoyl chitosan hydrochloride. J Appl Polym Sci 2012. [DOI: 10.1002/app.33910] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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13
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Hranjec M, Pavlović G, Karminski-Zamola G. Synthesis, crystal structure determination and antiproliferative activity of novel 2-amino-4-aryl-4,10-dihydro[1,3,5]triazino[1,2-a]benzimidazoles. J Mol Struct 2012. [DOI: 10.1016/j.molstruc.2011.10.054] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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14
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Terada M, Nii H. Highly Stereoselective [4+2] Cycloaddition of Azlactones to β,γ-Unsaturated α-Ketoesters Catalyzed by an Axially Chiral Guanidine Base. Chemistry 2011; 17:1760-3. [DOI: 10.1002/chem.201003015] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2010] [Indexed: 11/07/2022]
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15
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Terada M. Axially Chiral Guanidines as Efficient Bronsted Base Catalysts for Enantioselective Transformations. J SYN ORG CHEM JPN 2010. [DOI: 10.5059/yukigoseikyokaishi.68.1159] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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16
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Jarrett S, Brown A, Singh-Wilmot M. The Synthesis, Structure and Reactivity of 1-Thioxotetrahydropyridazino[1,2-a][1,2,4]triazin-4(1H)-one. HETEROCYCLES 2009. [DOI: 10.3987/com-09-11768] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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17
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Liu YH, Cao LH. An expedient one-step synthesis of polysubstituted guanidinoglucosides using HgO–4 Å molecular sieves as catalyst. Carbohydr Res 2008; 343:2376-83. [DOI: 10.1016/j.carres.2008.07.016] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2008] [Revised: 07/11/2008] [Accepted: 07/18/2008] [Indexed: 10/21/2022]
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