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Sivaev IB. Bis(Dicarbollide) Complexes of Transition Metals: How Substituents in Dicarbollide Ligands Affect the Geometry and Properties of the Complexes. Molecules 2024; 29:3510. [PMID: 39124915 PMCID: PMC11314212 DOI: 10.3390/molecules29153510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2024] [Revised: 07/23/2024] [Accepted: 07/23/2024] [Indexed: 08/12/2024] Open
Abstract
The interaction between different types of substituents in dicarbollide ligands and their influence on the stabilization of various rotational conformers (rotamers) of transition metal bis(dicarbollide) complexes [3,3'-M(1,2-C2B9H11)2]- are considered. It has been shown that the formation of intramolecular CH···X hydrogen bonds between dicarbollide ligands is determined by the size of the proton acceptor atom X rather than its electronegativity. Due to the stabilization of rotamers with different dipole moments, intramolecular hydrogen bonds between ligands in transition metal bis(dicarbollide) complexes can have a significant impact on the biological properties of their derivatives. In the presence of external complexing metals, weak intramolecular CH···X hydrogen bonds can be broken to form stronger X->M donor-acceptor bonds. This process is accompanied by the mutual rotation of dicarbollide ligands and can be used in sensors and molecular switches based on transition metal bis(dicarbollide) complexes.
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Affiliation(s)
- Igor B Sivaev
- A. N. Nesmeyanov Institute of Organoelement Compounds, 28 Vavilov Str., Moscow 119991, Russia
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2
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Charge-Compensated Derivatives of Nido-Carborane. INORGANICS 2023. [DOI: 10.3390/inorganics11020072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Abstract
This review summarizes data on the main types of charge-compensated nido-carborane derivatives. Compared with organic analogs, onium derivatives of nido-carborane have increased stability due to the stabilizing electron-donor action of the boron cage. Charge-compensated derivatives are considered according to the type of heteroatom bonded to a boron atom.
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3
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Mercury(II) chloride in the synthesis of nido-carborane derivatives with B-N, B-O, and B-S bonds. Russ Chem Bull 2022. [DOI: 10.1007/s11172-022-3381-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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4
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Abstract
Nucleophilic ring-opening reactions of cyclic oxonium derivatives of anionic boron hydrides are a convenient method of their modification which opens practically unlimited prospects for their incorporation into various macro- and biomolecules. This contribution provides an overview of the synthesis and reactivity of cyclic oxonium derivatives of nido-carborane as well as half-sandwich complexes based on it.
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Sisodiya DS, Ali SM, Chattopadhyay A. Exploring the reaction pathway involved in the dibenzo‐18‐crown‐6 synthesis from catechol and bis(2‐chloroethyl) ether in presence of base. J PHYS ORG CHEM 2021. [DOI: 10.1002/poc.4309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Dilawar Singh Sisodiya
- Department of Chemistry Birla Institute of Technology and Science (BITS), Pilani –K.K. Birla Goa Campus Goa India
| | - Sk. Musharaf Ali
- Chemical Engineering Division Bhabha Atomic Research Centre (BARC), Trombay Mumbai India
| | - Anjan Chattopadhyay
- Department of Chemistry Birla Institute of Technology and Science (BITS), Pilani –K.K. Birla Goa Campus Goa India
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Druzina AA, Shmalko AV, Sivaev IB, Bregadze VI. Cyclic oxonium derivatives of cobalt and iron bis(dicarbollides) and their use in organic synthesis. RUSSIAN CHEMICAL REVIEWS 2021. [DOI: 10.1070/rcr5000] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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7
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Asawa Y, Arsent’eva AV, Anufriev SA, Anisimov AA, Suponitsky KY, Filippov OA, Nakamura H, Sivaev IB. Synthesis of Bis(Carboranyl)amides 1,1'-μ-(CH 2NH(O)C(CH 2) n-1,2-C 2B 10H 11) 2 ( n = 0, 1) and Attempt of Synthesis of Gadolinium Bis(Dicarbollide). Molecules 2021; 26:1321. [PMID: 33801248 PMCID: PMC7958119 DOI: 10.3390/molecules26051321] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2021] [Revised: 02/23/2021] [Accepted: 02/25/2021] [Indexed: 11/17/2022] Open
Abstract
Bis(carboranyl)amides 1,1'-μ-(CH2NH(O)C(CH2)n-1,2-C2B10H11)2 (n = 0, 1) were prepared by the reactions of the corresponding carboranyl acyl chlorides with ethylenediamine. Crystal molecular structure of 1,1'-μ-(CH2NH(O)C-1,2-C2B10H11)2 was determined by single crystal X-ray diffraction. Treatment of bis(carboranyl)amides 1,1'-μ-(CH2NH(O)C(CH2)n-1,2-C2B10H11)2 with ammonium or cesium fluoride results in partial deboronation of the ortho-carborane cages to the nido-carborane ones with formation of [7,7'(8')-μ-(CH2NH(O)C(CH2)n-7,8-C2B9H11)2]2-. The attempted reaction of [7,7'(8')-μ-(CH2NH(O)CCH2-7,8-C2B9H11)2]2- with GdCl3 in 1,2-dimethoxy- ethane did not give the expected metallacarborane. The stability of different conformations of Gd-containing metallacarboranes has been estimated by quantum-chemical calculations using [3,3-μ-DME-3,3'-Gd(1,2-C2B9H11)2]- as a model. It was found that in the most stable conformation the CH groups of the dicarbollide ligands are in anti,anti-orientation with respect to the DME ligand, while any rotation of the dicarbollide ligand reduces the stability of the system. This makes it possible to rationalize the design of carborane ligands for the synthesis of gadolinium metallacarboranes on their base.
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Affiliation(s)
- Yasunobu Asawa
- School of Life Science and Technology, Tokyo Institute of Technology, Yokohama 226-8501, Japan;
| | - Aleksandra V. Arsent’eva
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (A.V.A.); (S.A.A.); (A.A.A.); (K.Y.S.); (O.A.F.)
- Faculty of Chemical Pharmaceutical Technologies and Biomedical Products, D.I. Mendeleev Russian Chemical Technological University, 9 Miusskaya Sq., 125047 Moscow, Russia
| | - Sergey A. Anufriev
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (A.V.A.); (S.A.A.); (A.A.A.); (K.Y.S.); (O.A.F.)
| | - Alexei A. Anisimov
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (A.V.A.); (S.A.A.); (A.A.A.); (K.Y.S.); (O.A.F.)
- Higher Chemical College at the Russian Academy of Sciences, D.I. Mendeleev Russian Chemical Technological University, 9 Miusskaya Sq., 125047 Moscow, Russia
| | - Kyrill Yu. Suponitsky
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (A.V.A.); (S.A.A.); (A.A.A.); (K.Y.S.); (O.A.F.)
- N.S. Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, 31 Leninsky Prosp., 119991 Moscow, Russia
| | - Oleg A. Filippov
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (A.V.A.); (S.A.A.); (A.A.A.); (K.Y.S.); (O.A.F.)
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 16/10 Miklukho- Maklay Str., 117997 Moscow, Russia
| | - Hiroyuki Nakamura
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama, Kanagawa 226-8503, Japan;
| | - Igor B. Sivaev
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (A.V.A.); (S.A.A.); (A.A.A.); (K.Y.S.); (O.A.F.)
- Basic Department of Chemistry of Innovative Materials and Technologies, G.V. Plekhanov Russian University of Economics, 36 Stremyannyi Line, 117997 Moscow, Russia
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Druzina AA, Zhidkova OB, Dudarova NV, Kosenko ID, Ananyev IV, Timofeev SV, Bregadze VI. Synthesis and Structure of Nido-Carboranyl Azide and Its "Click" Reactions. Molecules 2021; 26:530. [PMID: 33498488 PMCID: PMC7930967 DOI: 10.3390/molecules26030530] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Revised: 01/15/2021] [Accepted: 01/15/2021] [Indexed: 11/30/2022] Open
Abstract
Novel zwitter-ionic nido-carboranyl azide 9-N3(CH2)3Me2N-nido-7,8-C2B9H11 was prepared by the reaction of 9-Cl(CH2)3Me2N-nido-7,8-C2B9H11 with NaN3. The solid-state molecular structure of nido-carboranyl azide was determined by single-crystal X-ray diffraction. 9-N3(CH2)3Me2N-nido-7,8-C2B9H11 was used for the copper(I)-catalyzed azide-alkyne cycloaddition with phenylacetylene, alkynyl-3β-cholesterol and cobalt/iron bis(dicarbollide) terminal alkynes to form the target 1,2,3-triazoles. The nido-carborane-cholesterol conjugate 9-3β-Chol-O(CH2)C-CH-N3(CH2)3Me2N-nido-7,8-C2B9H11 with charge-compensated group in a linker can be used as a precursor for preparation of liposomes for Boron Neutron Capture Therapy (BNCT). A series of novel zwitter-ionic boron-enriched cluster compounds bearing a 1,2,3-triazol-metallacarborane-carborane conjugated system was synthesized. Prepared conjugates contain a large amount of boron atom in the biomolecule and potentially can be used for BNCT.
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Affiliation(s)
- Anna A. Druzina
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., 119991 Moscow, Russia; (O.B.Z.); (N.V.D.); (I.D.K.); (I.V.A.); (S.V.T.); (V.I.B.)
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Synthesis of C-Methoxy- and C,C’-Dimethoxy-ortho-carboranes. J Organomet Chem 2020. [DOI: 10.1016/j.jorganchem.2020.121523] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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10
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Anufriev SA, Sivaev IB, Nakamura H. Two possible ways to combine boron and gadolinium for Gd-guided BNCT. A concept. PHOSPHORUS SULFUR 2020. [DOI: 10.1080/10426507.2020.1804151] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Sergey A. Anufriev
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, Moscow, Russia
| | - Igor B. Sivaev
- A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, Moscow, Russia
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Bakardjiev M, El Anwar S, Bavol D, Růžičková Z, Grűner B. Focus on Chemistry of the 10-Dioxane- nido-7,8-dicarba-undecahydrido Undecaborate Zwitterion; Exceptionally Easy Abstraction of Hydrogen Bridge and Double-Action Pathways Observed in Ring Cleavage Reactions with OH - as Nucleophile. Molecules 2020; 25:E814. [PMID: 32069968 PMCID: PMC7070711 DOI: 10.3390/molecules25040814] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2020] [Revised: 02/08/2020] [Accepted: 02/11/2020] [Indexed: 12/25/2022] Open
Abstract
Ring cleavage of cyclic ether substituents attached to a boron cage via an oxonium oxygen atom are amongst the most versatile methods for conjoining boron closo-cages with organic functional groups. Here we focus on much less tackled chemistry of the 11-vertex zwitterionic compound [10-(O-(CH2-CH2)2O)-nido-7,8-C2B9H11] (1), which is the only known representative of cyclic ether substitution at nido-cages, and explore the scope for the use of this zwitterion 1 in reactions with various types of nucleophiles including bifunctional ones. Most of the nitrogen, oxygen, halogen, and sulphur nucleophiles studied react via nucleophilic substitution at the C1 atom of the dioxane ring, followed by its cleavage that produces six atom chain between the cage and the respective organic moiety. We also report the differences in reactivity of this nido-cage system with the simplest oxygen nucleophile, i.e., OH-. With compound 1, reaction proceeds in two possible directions, either via typical ring cleavage, or by replacement of the whole dioxane ring with -OH at higher temperatures. Furthermore, an easy deprotonation of the hydrogen bridge in 1 was observed that proceeds even in diluted aqueous KOH. We believe this knowledge can be further applied in the design of functional molecules, materials, and drugs.
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Affiliation(s)
- Mário Bakardjiev
- Institute of Inorganic Chemistry of Czech Academy of Sciences, 25068 Řež, Czech Republic; (M.B.); (S.E.A.); (D.B.)
| | - Suzan El Anwar
- Institute of Inorganic Chemistry of Czech Academy of Sciences, 25068 Řež, Czech Republic; (M.B.); (S.E.A.); (D.B.)
| | - Dmytro Bavol
- Institute of Inorganic Chemistry of Czech Academy of Sciences, 25068 Řež, Czech Republic; (M.B.); (S.E.A.); (D.B.)
| | - Zdeňka Růžičková
- Department of General and Inorganic Chemistry, Faculty of Chemical Technology, University of Pardubice, Studentská 95, 53210 Pardubice, Czech Republic;
| | - Bohumír Grűner
- Institute of Inorganic Chemistry of Czech Academy of Sciences, 25068 Řež, Czech Republic; (M.B.); (S.E.A.); (D.B.)
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Bogdanova EV, Stogniy MY, Chekulaeva LA, Anisimov AA, Suponitsky KY, Sivaev IB, Grin MA, Mironov AF, Bregadze VI. Synthesis and reactivity of propionitrilium derivatives of cobalt and iron bis(dicarbollides). NEW J CHEM 2020. [DOI: 10.1039/d0nj03017a] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
The nucleophilic addition of alcohols and thiols to 8-propionitrilium derivatives of cobalt and iron bis(dicarbollides) gives the corresponding imidates and thioimidates.
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Affiliation(s)
- Ekaterina V. Bogdanova
- A.N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
- M.V. Lomonosov Institute of Fine Chemical Technology
| | - Marina Yu. Stogniy
- A.N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
- M.V. Lomonosov Institute of Fine Chemical Technology
| | - Lyubov A. Chekulaeva
- A.N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Aleksei A. Anisimov
- A.N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
- D.I. Mendeleev Russian Chemical Technological University
| | - Kyrill Yu. Suponitsky
- A.N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
- N.S. Kurnakov Institute of General and Inorganic Chemistry
| | - Igor B. Sivaev
- A.N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
- G.V. Plekhanov Russian University of Economics
| | - Mikhail A. Grin
- M.V. Lomonosov Institute of Fine Chemical Technology
- MIREA - Russian Technological University
- Moscow
- Russia
| | - Andrey F. Mironov
- M.V. Lomonosov Institute of Fine Chemical Technology
- MIREA - Russian Technological University
- Moscow
- Russia
| | - Vladimir I. Bregadze
- A.N. Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
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Stogniy MY, Erokhina SA, Anisimov AA, Suponitsky KY, Sivaev IB, Bregadze VI. 10-NCCH2CH2OCH2CH2C N-7,8-C2B9H11: Synthesis and reactions with various nucleophiles. Polyhedron 2019. [DOI: 10.1016/j.poly.2019.114170] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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14
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Abstract
9-Dimethyloxonium, 10-dimethyloxonium, 9-methoxy and 10-methoxy derivatives of nido-carborane (9-Me2O-7,8-C2B9H11, 10-Me2O-7,8-C2B9H11, [9-MeO-7,8-C2B9H11]−, and [10-MeO-7,8-C2B9H11]−, respectively) were prepared by the reaction of the parent nido-carborane [7,8-C2B9H12]− with mercury(II) chloride in a mixture of benzene and dimethoxymethane. Reactions of the 9 and 10-dimethyloxonium derivatives with triethylamine, pyridine, and 3-methyl-6-nitro-1H-indazole result in their N-methylation with the formation of the corresponding salts with 9 and 10-methoxy-nido-carborane anions. The reaction of the symmetrical methoxy derivative [10-MeO-7,8-C2B9H11]− with anhydrous FeCl2 in tetrahydrofuran in the presence of t-BuOK results in the corresponding paramagnetic iron bis(dicarbollide) complex [8,8′-(MeO)2-3,3′-Fe(1,2-C2B9H10)2]−, whereas the similar reactions of the asymmetrical methoxy derivative [9-MeO-7,8-C2B9H11]− with FeCl2 and CoCl2 presumably produce the 4,7′-isomers [4,7′-(MeO)2-3,3′-M(1,2-C2B9H10)2]− (M = Fe, Co) rather than a mixture of rac-4,7′- and meso-4,4′-isomers.
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Kuvshinova SS, Nelyubina YV, Smol'yakov AF, Kosenko ID, Barakovskaya IG, Loginov DA. Usage of (C5R5)Co(CO)I2 (R = H, Me) for the synthesis of 12-vertex closo-cobaltacarboranes. Unexpected formation of 10-{CpCo(C5H4)}-7,8-Me2-7,8-nido-C2B9H9. J Organomet Chem 2018. [DOI: 10.1016/j.jorganchem.2018.01.045] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Sivaev IB. Ferrocene and Transition Metal Bis(Dicarbollides) as Platform for Design of Rotatory Molecular Switches. Molecules 2017; 22:molecules22122201. [PMID: 29232924 PMCID: PMC6149777 DOI: 10.3390/molecules22122201] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2017] [Revised: 11/27/2017] [Accepted: 12/01/2017] [Indexed: 11/16/2022] Open
Abstract
Design of rotatory molecular switches based on extremely stable sandwich organometallic complexes ferrocene and bis(dicarbollide) complexes of transition metals is reviewed. The "on"-"off" switching in these systems can be controlled by various external stimuli such as change of the solution pH, interactions with coordinating species or redox reactions involving the central atom or substituents in the ligands.
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Affiliation(s)
- Igor B Sivaev
- A. N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov Str., Moscow 119991, Russia.
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Anufriev SA, Erokhina SA, Suponitsky KY, Godovikov IA, Filippov OA, Fabrizi de Biani F, Corsini M, Chizhov AO, Sivaev IB. Methylsulfanyl-Stabilized Rotamers of Cobalt Bis(dicarbollide). Eur J Inorg Chem 2017. [DOI: 10.1002/ejic.201700575] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
- Sergey A. Anufriev
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
| | - Svetlana A. Erokhina
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
| | - Kyrill Yu. Suponitsky
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
| | - Ivan A. Godovikov
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
| | - Oleg A. Filippov
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
| | - Fabrizia Fabrizi de Biani
- Dipartimento di Biotecnologie, Chimica e Farmacia; Università degli Studi di Siena; Via A. Moro 2 53100 Siena Italy
| | - Maddalena Corsini
- Dipartimento di Biotecnologie, Chimica e Farmacia; Università degli Studi di Siena; Via A. Moro 2 53100 Siena Italy
| | - Alexander O. Chizhov
- N.D. Zelinsky Institute of Organic Chemistry; Russian Academy of Sciences; Leninsky Prosp. 47 119991 Moscow Russia
| | - Igor B. Sivaev
- A.N. Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Vavilov Str. 28 119991 Moscow Russia
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