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Soto-Martínez DM, Clements GD, Díaz JE, Becher J, Reynolds RC, Ochsenbauer C, Snowden TS. Preparation of von Hippel-Lindau (VHL) E3 ubiquitin ligase ligands exploiting constitutive hydroxyproline for benzylic amine protection. RSC Adv 2024; 14:17077-17090. [PMID: 38808246 PMCID: PMC11130640 DOI: 10.1039/d4ra01974a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Accepted: 05/16/2024] [Indexed: 05/30/2024] Open
Abstract
The von Hippel-Lindau (VHL) protein serves as the substrate recognition subunit of the multi-subunit Cullin-2 RING E3 ubiquitin ligase (CRL2VHL), which regulates intracellular concentrations of hypoxia inducible factors (HIFs) through a ubiquitin proteasome system (UPS) cascade. Strategic recruitment of CRL2VHL by bi- or trifunctional targeted protein degraders (e.g., PROTACs®) offers the prospect of promoting aberrant polyubiquitination and ensuing proteasomal degradation of disease-related proteins. Non-peptidic, l-hydroxyproline-bearing VHL ligands such as VH032 (1) and its chiral benzylic amine analog Me-VH032 (2), are functional components of targeted protein degraders commonly employed for this purpose. Herein, we compare two approaches for the preparation of 1 and 2 primarily highlighting performance differences between Pd(OAc)2 and Pd-PEPPSI-IPr for the key C-H arylation of 4-methylthiazole. Results from this comparison prompted the development of a unified, five-step route for the preparation of either VH032 (1) or Me-VH032 (2) in multigram quantities, resulting in yields of 56% and 61% for 1 and 2, respectively. Application of N-Boc-l-4-hydroxyproline rather than N-tert-butoxycarbonyl to shield the benzylic amine during the coupling step enhances step economy. Additionally, we identified previously undisclosed minor byproducts generated during arylation steps along with observations from amine deprotection and amidation reaction steps that may prove helpful not only for the preparation of 1 and 2, but for other VHL recruiting ligands, as well.
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Affiliation(s)
- Diana M Soto-Martínez
- Department of Chemistry and Biochemistry, The University of Alabama 250 Hackberry Lane Tuscaloosa AL 35487 USA
| | - Garrett D Clements
- Department of Chemistry and Biochemistry, The University of Alabama 250 Hackberry Lane Tuscaloosa AL 35487 USA
| | - John E Díaz
- Department of Chemistry and Biochemistry, The University of Alabama 250 Hackberry Lane Tuscaloosa AL 35487 USA
| | - Joy Becher
- Department of Chemistry and Biochemistry, The University of Alabama 250 Hackberry Lane Tuscaloosa AL 35487 USA
| | - Robert C Reynolds
- Department of Medicine, Division of Hematology and Oncology, University of Alabama at Birmingham Birmingham AL 35294 USA
| | - Christina Ochsenbauer
- Department of Medicine, Division of Hematology and Oncology, University of Alabama at Birmingham Birmingham AL 35294 USA
| | - Timothy S Snowden
- Department of Chemistry and Biochemistry, The University of Alabama 250 Hackberry Lane Tuscaloosa AL 35487 USA
- Center for Convergent Bioscience and Medicine, The University of Alabama 720 2nd St. Tuscaloosa AL 35401 USA
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Liu J, Zhu Y, Luo J, Zhu Z, Zhao L, Zeng X, Li D, Chen J, Lan X. A Simple and Practical Bis-N-Heterocyclic Carbene as an Efficient Ligand in Cu-Catalyzed Glaser Reaction. Molecules 2023; 28:5083. [PMID: 37446745 DOI: 10.3390/molecules28135083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Revised: 06/17/2023] [Accepted: 06/27/2023] [Indexed: 07/15/2023] Open
Abstract
Conjugated diyne derivatives are important scaffolds in modern organic synthetic chemistry. Using the Glaser reaction involves the coupling of terminal alkynes which can efficiently produce conjugated diyne derivatives, while the use of a stoichiometric amount of copper salts, strong inorganic base, and excess oxidants is generally needed. Developing an environmentally friendly and effective method for the construction of symmetrical 1,3-diynes compounds by Glaser coupling is still highly desirable. In this study, we present an economical method for the production of symmetric diynes starting from various terminal acetylenes in a Glaser reaction. A simple and practical bis-N-heterocyclic carbene ligand has been introduced as efficient ligands for the Cu-catalyzed Glaser reaction. High product yields were obtained at 100 °C for a variety of substrates including aliphatic and aromatic terminal alkynes and differently substituted terminal alkynes including the highly sterically hindered substrate 2-methoxy ethynylbenzene or 2-trifluoromethyl ethynylbenzene and a series of functional groups, such as trifluoromethyl group, ester group, carboxyl group, and nitrile group. The established protocol is carried out in air under base-free condition and is operationally simple. These research work suggest that bis-N-heterocyclic carbene could also an appealing ligand for Glaser reaction and provide a reference for the preparation of symmetric 1,3-diynes in industrial filed.
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Affiliation(s)
- Jie Liu
- Hunan Provincial Key Laboratory of Xiangnan Rare-Precious Metals Compounds Research and Application, School of Chemistry and Environmental Science, Xiangnan University, Chenzhou 423000, China
| | - Yao Zhu
- Hunan Provincial Key Laboratory of Xiangnan Rare-Precious Metals Compounds Research and Application, School of Chemistry and Environmental Science, Xiangnan University, Chenzhou 423000, China
| | - Jun Luo
- Hunan Provincial Key Laboratory of Xiangnan Rare-Precious Metals Compounds Research and Application, School of Chemistry and Environmental Science, Xiangnan University, Chenzhou 423000, China
| | - Ziyi Zhu
- Hunan Provincial Key Laboratory of Xiangnan Rare-Precious Metals Compounds Research and Application, School of Chemistry and Environmental Science, Xiangnan University, Chenzhou 423000, China
| | - Lin Zhao
- Hunan Provincial Key Laboratory of Xiangnan Rare-Precious Metals Compounds Research and Application, School of Chemistry and Environmental Science, Xiangnan University, Chenzhou 423000, China
| | - Xiaoyan Zeng
- Hunan Provincial Key Laboratory of Xiangnan Rare-Precious Metals Compounds Research and Application, School of Chemistry and Environmental Science, Xiangnan University, Chenzhou 423000, China
| | - Dongdong Li
- Hunan Provincial Key Laboratory of Xiangnan Rare-Precious Metals Compounds Research and Application, School of Chemistry and Environmental Science, Xiangnan University, Chenzhou 423000, China
| | - Jun Chen
- Hunan Provincial Key Laboratory of Xiangnan Rare-Precious Metals Compounds Research and Application, School of Chemistry and Environmental Science, Xiangnan University, Chenzhou 423000, China
| | - Xiaobing Lan
- Hunan Provincial Key Laboratory of Xiangnan Rare-Precious Metals Compounds Research and Application, School of Chemistry and Environmental Science, Xiangnan University, Chenzhou 423000, China
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Barboza AA, Dantas JA, Jardim GADM, Ferreira MAB, Costa MO, Chiavegatti A. Recent Advances in Palladium-Catalyzed Oxidative Couplings in the Synthesis/Functionalization of Cyclic Scaffolds Using Molecular Oxygen as the Sole Oxidant. SYNTHESIS-STUTTGART 2022. [DOI: 10.1055/a-1701-7397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
AbstractOver the past years, Pd(II)-catalyzed oxidative couplings have enabled the construction of molecular scaffolds with high structural diversity via C–C, C–N and C–O bond-forming reactions. In contrast to the use of stoichiometric amounts of more common oxidants, such as metal salts (Cu and Ag) and benzoquinone derivatives, the use of molecular oxygen for the direct or indirect regeneration of Pd(II) species presents itself as a more viable alternative in terms of economy and sustainability. In this review, we describe recent advances on the development of Pd-catalyzed oxidative cyclizations/functionalizations, where molecular oxygen plays a pivotal role as the sole stoichiometric oxidant.1 Introduction2 Oxidative C–C and C–Nu Coupling2.1 Intramolecular Oxidative C–Nu Heterocyclization Reactions2.1.1 C–H Activation2.1.2 Wacker/Aza-Wacker-Type Cyclization2.1.3 Tandem Wacker/Aza-Wacker and Cyclization/Cross-Coupling Reactions2.2 Intermolecular Oxidative C–Nu Heterocoupling Reactions2.3 Intramolecular Oxidative (C–C) Carbocyclization Reactions2.4 Intermolecular Oxidative C–C Coupling Reactions2.4.1 Cyclization Reactions2.4.2 Cross-Coupling Reactions2.4.3 Homo-Coupling Reactions3 Aerobic Dehydrogenative Coupling/Functionalization4 Oxidative C–H Functionalization5 Summary
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Kaloğlu M, Şahan MH, Düşünceli SD, Özdemir İ. Synthesis of Quinoxaline-Linked Bis(Benzimidazolium) Salts and Their Catalytic Application in Palladium-Catalyzed Direct Arylation of Heteroarenes. Catal Letters 2021. [DOI: 10.1007/s10562-021-03787-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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Gokanapalli A, Motakatla VKR, Peddiahgari VGR. Investigation of Pd‐PEPPSI catalysts and coupling partners towards direct C2‐arylation/heteroarylation of benzoxazole. Appl Organomet Chem 2021. [DOI: 10.1002/aoc.6296] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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Slimani I, Mansour L, Özdemir I, Gürbüz N, Hamdi N. Synthesis, characterization and catalytic activity of PEPPSI-type palladium–NHC complexes. Inorganica Chim Acta 2021. [DOI: 10.1016/j.ica.2020.120043] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Khan S, Buğday N, Yaşar S, Ullah N, Özdemir İ. Pd-N-heterocyclic carbene complex catalysed C–H bond activation of 2-isobutylthiazole at the C5 position with aryl bromides. NEW J CHEM 2021. [DOI: 10.1039/d1nj00514f] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
An effective and efficient catalytic system has been reported for the synthesis of C5-arylated 2-isobutylthiazoles.
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Affiliation(s)
- Siraj Khan
- Quaid-i-Azam University
- Faculty of Biological Sciences
- Department of Pharmacy
- Islamabad
- Pakistan
| | - Nesrin Buğday
- İnönü University
- Faculty of Science and art
- Department of Chemistry
- Malatya
- Turkey
| | - Sedat Yaşar
- İnönü University
- Faculty of Science and art
- Department of Chemistry
- Malatya
- Turkey
| | - Naseem Ullah
- Quaid-i-Azam University
- Faculty of Biological Sciences
- Department of Pharmacy
- Islamabad
- Pakistan
| | - İsmail Özdemir
- İnönü University
- Faculty of Science and art
- Department of Chemistry
- Malatya
- Turkey
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Facile access to conjugated polymers under aerobic conditions via Pd-Catalyzed direct arylation and aryl amination polycondensation. POLYMER 2020. [DOI: 10.1016/j.polymer.2020.122927] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Kaloğlu M, Düşünceli SD, Özdemir İ. The first used butylene linked bis(N-heterocyclic carbene)-palladium-PEPPSI complexes in the direct arylation of furan and pyrrole. J Organomet Chem 2020. [DOI: 10.1016/j.jorganchem.2020.121236] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Kaloğlu M, Özdemir İ. The direct C4-arylation of 3,5-dimethylisoxazole with aryl bromides catalyzed by imidazolidin-2-ylidene based palladium-PEPPSI complexes. Inorganica Chim Acta 2020. [DOI: 10.1016/j.ica.2020.119454] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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Türker F, Bereket İ, Barut Celepci D, Aktaş A, Gök Y. New Pd-PEPPSI complexes bearing meta-cyanobenzyl-Substituted NHC: Synthesis, characterization, crystal structure and catalytic activity in direct C–H arylation of (Hetero)arenes with aryl bromides. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127608] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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Sun Y, Li T. Fabrication and Application of Graphene Supported Diimine‐Palladium Complex Catalyst for Organic Synthesis. ChemistrySelect 2020. [DOI: 10.1002/slct.201904488] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Yunlong Sun
- School of PharmacyGuangdong Pharmaceutical University School of Pharmacy, Guangdong Pharmaceutical University Guangzhou 510008 China
| | - Tian Li
- School of Chemistry and Chemical EngineeringGuangdong Pharmaceutical University School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University Zhongshan 528458 China
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