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Üstün E, Şahin N, Özdemir İ, Günal S, Gürbüz N, Özdemir İ, Sémeril D. Design, synthesis, antimicrobial activity and molecular docking study of cationic bis-benzimidazole-silver(I) complexes. Arch Pharm (Weinheim) 2023; 356:e2300302. [PMID: 37541657 DOI: 10.1002/ardp.202300302] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Revised: 07/18/2023] [Accepted: 07/19/2023] [Indexed: 08/06/2023]
Abstract
Two series of bis(1-alkylbenzimidazole)silver(I) nitrate and bis(1-alkyl-5,6-dimethylbenzimidazole)silver(I) nitrate complexes, in which the alkyl substituent is either an allyl, a 2-methylallyl, an isopropyl or a 3-methyloxetan-3-yl-methyl chain, were synthesized and fully characterized. The eight N-coordinated silver(I) complexes were screened for both antimicrobial activities against Gram-negative (Escherichia coli, Pseudomonas aeruginosa, Klebsiella pneumoniae, and Acinetobacter baumannii) and Gram-positive (Staphylococcus aureus, Staphylococcus aureus MRSA, and Enterococcus faecalis) bacteria and antifungal activities against Candida albicans and Candida glabrata strains. Moderate minimal inhibitory concentrations (MIC) of 0.087 μmol/mL were found when the Gram-negative and Gram-positive bacteria were treated with the silver complexes. Nevertheless, MIC values of 0.011 μmol/mL, twice lower than for the well-known fluconazole, against the two fungi were measured. In addition, molecular docking was carried out with the structure of Escherichia coli DNA gyrase and CYP51 from the pathogen Candida glabrata with the eight organometallic complexes, and molecular reactivity descriptors were calculated with the density functional theory-based calculation methods.
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Affiliation(s)
- Elvan Üstün
- Department of Chemistry, Faculty of Art and Science, Ordu University, Ordu, Türkiye
| | - Neslihan Şahin
- Department of Mathematics and Science Education, Cumhuriyet University, Sivas, Türkiye
| | - İlknur Özdemir
- Department of Chemistry, Faculty of Science and Art, İnönü University, Malatya, Türkiye
- Drug Application and Research Center, İnönü University, Malatya, Türkiye
| | - Selami Günal
- Department of Microbiology, Faculty of Pharmacy, İnönü University, Malatya, Türkiye
| | - Nevin Gürbüz
- Department of Chemistry, Faculty of Science and Art, İnönü University, Malatya, Türkiye
- Drug Application and Research Center, İnönü University, Malatya, Türkiye
| | - İsmail Özdemir
- Department of Chemistry, Faculty of Science and Art, İnönü University, Malatya, Türkiye
- Drug Application and Research Center, İnönü University, Malatya, Türkiye
| | - David Sémeril
- Synthèse Organométallique et Catalyse, UMR-CNRS 7177, University of Strasbourg, Strasbourg, France
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2
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Podyacheva E, Afanasyev OI, Vasilyev DV, Chusov D. Borrowing Hydrogen Amination Reactions: A Complex Analysis of Trends and Correlations of the Various Reaction Parameters. ACS Catal 2022. [DOI: 10.1021/acscatal.2c01133] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Evgeniya Podyacheva
- A.N. Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences, Vavilova St. 28, Moscow 119991, Russian Federation
- National Research University Higher School of Economics, Miasnitskaya Str. 20, Moscow 101000, Russian Federation
| | - Oleg I. Afanasyev
- A.N. Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences, Vavilova St. 28, Moscow 119991, Russian Federation
| | - Dmitry V. Vasilyev
- Forschungszentrum Jülich GmbH, Helmholtz Institute Erlangen-Nürnberg for Renewable Energy (IEK-11), Egerlandstr. 3, 91058 Erlangen, Germany
| | - Denis Chusov
- A.N. Nesmeyanov Institute of Organoelement Compounds of the Russian Academy of Sciences, Vavilova St. 28, Moscow 119991, Russian Federation
- National Research University Higher School of Economics, Miasnitskaya Str. 20, Moscow 101000, Russian Federation
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3
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Moutaoukil Z, Serrano-Díez E, Collado IG, Jiménez-Tenorio M, Botubol-Ares JM. N-Alkylation of organonitrogen compounds catalyzed by methylene-linked bis-NHC half-sandwich ruthenium complexes. Org Biomol Chem 2022; 20:831-839. [PMID: 35018948 DOI: 10.1039/d1ob02214h] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
An efficient ruthenium-catalyzed N-alkylation of amines, amides and sulfonamides has been developed employing novel pentamethylcyclopentadienylruthenium(II) complexes bearing the methylene linked bis(NHC) ligand bis(3-methylimidazol-2-ylidene)methane. The acetonitrile complex 2 has proven particularly effective with a broad range of substrates with low catalyst loading (0.1-2.5 mol%) and high functional group tolerance under mild conditions. A total of 52 N-alkylated organonitrogen compounds including biologically relevant scaffolds were synthesized from (hetero)aromatic and aliphatic amines, amides and sulfonamides using alcohols or diols as alkylating agents in up to 99% isolated yield, even on gram-scale reactions. In the case of sulfonamides, it is the first example of N-alkylation employing a transition-metal complex bearing NHC ligands.
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Affiliation(s)
- Zakaria Moutaoukil
- University of Cadiz, Departamento de Química Orgánica-INBIO, Facultad de Ciencias, Torre Sur, 4° planta, 11510, Puerto Real, Cádiz.
| | - Emmanuel Serrano-Díez
- University of Cadiz, Departamento de Química Orgánica-INBIO, Facultad de Ciencias, Torre Sur, 4° planta, 11510, Puerto Real, Cádiz.
| | - Isidro G Collado
- University of Cadiz, Departamento de Química Orgánica-INBIO, Facultad de Ciencias, Torre Sur, 4° planta, 11510, Puerto Real, Cádiz.
| | - Manuel Jiménez-Tenorio
- University of Cadiz, Departamento de Ciencias de los Materiales e Ingeniería Metalúrgica y Química Inorgánica-INBIO, Facultad de Ciencias, Torre Norte, 1° planta, 11510, Puerto Real, Cádiz, Spain
| | - José Manuel Botubol-Ares
- University of Cadiz, Departamento de Química Orgánica-INBIO, Facultad de Ciencias, Torre Sur, 4° planta, 11510, Puerto Real, Cádiz.
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Oueslati Y, El Bakri Y, Valkonen A, Gómez García CJ, Anouar EH, Smirani W. Growth, single crystal investigation, hirshfeld surface analysis, DFT studies, molecular docking, physico-chemical characterization and, in vitro, antioxidant activity of a novel hybrid complex. J SOLID STATE CHEM 2021. [DOI: 10.1016/j.jssc.2021.122319] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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5
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Singh A, Maji A, Joshi M, Choudhury AR, Ghosh K. Designed pincer ligand supported Co(II)-based catalysts for dehydrogenative activation of alcohols: Studies on N-alkylation of amines, α-alkylation of ketones and synthesis of quinolines. Dalton Trans 2021; 50:8567-8587. [PMID: 34075925 DOI: 10.1039/d0dt03748f] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Base-metal catalysts Co1, Co2 and Co3 were synthesized from designed pincer ligands L1, L2 and L3 having NNN donor atoms respectively. Co1, Co2 and Co3 were characterized by IR, UV-Vis. and ESI-MS spectroscopic studies. Single crystal X-ray diffraction studies were investigated to authenticate the molecular structures of Co1 and Co3. Catalysts Co1, Co2 and Co3 were utilized to study the dehydrogenative activation of alcohols for N-alkylation of amines, α-alkylation of ketones and synthesis of quinolines. Under optimized reaction conditions, a broad range of substrates including alcohols, anilines and ketones were exploited. A series of control experiments for N-alkylation of amines, α-alkylation of ketones and synthesis of quinolines were examined to understand the reaction pathway. ESI-MS spectral studies were investigated to characterize cobalt-alkoxide and cobalt-hydride intermediates. Reduction of styrene by evolved hydrogen gas during the reaction was investigated to authenticate the dehydrogenative nature of the catalysts. Probable reaction pathways were proposed for N-alkylation of amines, α-alkylation of ketones and synthesis of quinolines on the basis of control experiments and detection of reaction intermediates.
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Affiliation(s)
- Anshu Singh
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee-247667, Uttarakhand, India.
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6
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Çiçek M, Gürbüz N, Özdemir N, Özdemir İ, İspir E. Half-sandwich Ru( ii) arene complexes bearing benzimidazole ligands for the N-alkylation reaction of aniline with alcohols in a solvent-free medium. NEW J CHEM 2021. [DOI: 10.1039/d1nj01539g] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
In this article, the direct N-alkylation reactions of amines with alcohol derivatives using the borrowing hydrogen methodology have been investigated.
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Affiliation(s)
- Metin Çiçek
- Department of Chemistry
- Faculty of Science and Arts
- Kahramanmaraş Sütçü İmam University
- Kahramanmaraş
- Turkey
| | - Nevin Gürbüz
- Catalysis Research and Application Center
- Inönü University
- 44280 Malatya
- Turkey
- Department of Chemistry
| | - Namık Özdemir
- Ondokuz Mayıs University
- Faculty of Education
- Department of Mathematics and Science Education
- 9055139 Samsun
- Turkey
| | - İsmail Özdemir
- Catalysis Research and Application Center
- Inönü University
- 44280 Malatya
- Turkey
- Department of Chemistry
| | - Esin İspir
- Department of Chemistry
- Faculty of Science and Arts
- Kahramanmaraş Sütçü İmam University
- Kahramanmaraş
- Turkey
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Serdaroğlu G, Şahin-Bölükbaşı S, Barut-Celepci D, Sevinçek R, Şahin N, Gürbüz N, Özdemir İ. Synthesis, in vitro anticancer activities, and quantum chemical investigations on 1,3-bis-(2-methyl-2-propenyl)benzimidazolium chloride and its Ag(I) complex. JOURNAL OF CHEMICAL RESEARCH 2020. [DOI: 10.1177/1747519820950219] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
1,3- Bis-(2-methyl-2-propenyl)benzimidazolium chloride and its Ag(I) complex are synthesized and the structures are elucidated using spectroscopies techniques. The molecular and crystal structures of the benzimidazolium salt are confirmed by X-ray crystallography. The molecular geometries of the benzimidazolium and its Ag(I) salt are analyzed using the B3LYP functional with the 6–311+G(d,p)/LANL2DZ basis set. The observed Fourier transform infrared and nuclear magnetic resonance isotropic shifts are compared with the calculated values. Besides, the quantum chemical identifiers, significant intramolecular interactions, and molecular electrostatic potential plots are used to show the tendency/site of the chemical reactivity behavior. The three-dimensional Hirshfeld surfaces and the associated two-dimensional fingerprint plots are applied to obtain an insight into the behavior of the interactions in the crystal. Both compounds are tested for their in vitro anticancer activities against DU-145 and MCF-7 cancer cells and L-929 non-cancer cells using the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide assay.
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Affiliation(s)
- Goncagül Serdaroğlu
- Department of Science Education, Faculty of Education, Sivas Cumhuriyet University, Sivas, Turkey
| | - Serap Şahin-Bölükbaşı
- Department of Biochemistry, Faculty of Pharmacy, Sivas Cumhuriyet University, Sivas, Turkey
| | - Duygu Barut-Celepci
- Department of Physics, Faculty of Sciences, Dokuz Eylül University, İzmir, Turkey
| | - Resul Sevinçek
- Department of Physics, Faculty of Sciences, Dokuz Eylül University, İzmir, Turkey
| | - Neslihan Şahin
- Department of Basic Education, Faculty of Education, Sivas Cumhuriyet University, Sivas, Turkey
- Department of Chemistry, Faculty of Arts and Sciences, İnönü University, Malatya, Turkey
- Catalysis Research and Application Center, Inönü University, Malatya, Turkey
| | - Nevin Gürbüz
- Department of Chemistry, Faculty of Arts and Sciences, İnönü University, Malatya, Turkey
- Catalysis Research and Application Center, Inönü University, Malatya, Turkey
| | - İsmail Özdemir
- Department of Chemistry, Faculty of Arts and Sciences, İnönü University, Malatya, Turkey
- Catalysis Research and Application Center, Inönü University, Malatya, Turkey
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