1
|
Georgiev NI, Bakov VV, Bojinov VB. A Tutorial Review on the Fluorescent Probes as a Molecular Logic Circuit-Digital Comparator. Molecules 2023; 28:6327. [PMID: 37687156 PMCID: PMC10489932 DOI: 10.3390/molecules28176327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2023] [Revised: 08/25/2023] [Accepted: 08/28/2023] [Indexed: 09/10/2023] Open
Abstract
The rapid progress in the field of fluorescent probes and fluorescent sensing material extended this research area toward more complex molecular logic gates capable of carrying out a variety of sensing functions simultaneously. These molecules are able to calculate a composite result in which the analysis is not performed by a man but by the molecular device itself. Since the first report by de Silva of AND molecular logic gate, all possible logic gates have been achieved at the molecular level, and currently, utilization of more complicated molecular logic circuits is a major task in this field. Comparison between two digits is the simplest logic operation, which could be realized with the simplest logic circuit. That is why the right understanding of the applied principles during the implementation of molecular digital comparators could play a critical role in obtaining logic circuits that are more complicated. Herein, all possible ways for the construction of comparators on the molecular level were discussed, and recent achievements connected with these devices were presented.
Collapse
Affiliation(s)
- Nikolai I. Georgiev
- Department of Organic Synthesis, University of Chemical Technology and Metallurgy, 8 Kliment Ohridsky Str., 1756 Sofia, Bulgaria;
| | - Ventsislav V. Bakov
- Department of Organic Synthesis, University of Chemical Technology and Metallurgy, 8 Kliment Ohridsky Str., 1756 Sofia, Bulgaria;
| | - Vladimir B. Bojinov
- Department of Organic Synthesis, University of Chemical Technology and Metallurgy, 8 Kliment Ohridsky Str., 1756 Sofia, Bulgaria;
- Bulgarian Academy of Sciences, 1040 Sofia, Bulgaria
| |
Collapse
|
2
|
The simplest molecular chemosensor for detecting higher pHs, Cu2+ and S2- in aqueous environment and executing various logic gates. J Photochem Photobiol A Chem 2019. [DOI: 10.1016/j.jphotochem.2018.11.029] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
|
3
|
McKinney BOF, Daly B, Yao C, Schroeder M, de Silva AP. Consolidating Molecular Logic with New Solid-Bound YES and PASS 1 Gates and Their Combinations. Chemphyschem 2017; 18:1760-1766. [DOI: 10.1002/cphc.201700120] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2017] [Indexed: 01/05/2023]
Affiliation(s)
| | - Brian Daly
- School of Chemistry and Chemical Engineering; Queen's University; Belfast BT9 5AG UK
| | - Chaoyi Yao
- School of Chemistry and Chemical Engineering; Queen's University; Belfast BT9 5AG UK
| | - Marc Schroeder
- School of Chemistry and Chemical Engineering; Queen's University; Belfast BT9 5AG UK
| | - A. Prasanna de Silva
- School of Chemistry and Chemical Engineering; Queen's University; Belfast BT9 5AG UK
| |
Collapse
|
4
|
Jiang T, Wang W, Wu X, Wu W, Bai H, Ma Z, Shen Y, Yang K, Li M. Discovery of New Substrates forLuxABBacterial Bioluminescence. Chem Biol Drug Des 2016; 88:197-208. [DOI: 10.1111/cbdd.12747] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2015] [Revised: 11/26/2015] [Accepted: 02/08/2016] [Indexed: 01/04/2023]
Affiliation(s)
- Tianyu Jiang
- Department of Medicinal Chemistry; Key Laboratory of Chemical Biology (MOE); School of Pharmaceutical Sciences; Shandong University; Jinan Shandong 250012 China
| | - Weishan Wang
- State Key Laboratory of Microbial Resources; Institute of Microbiology; Chinese Academy of Sciences; Beijing 100190 China
| | - Xingkang Wu
- Department of Natural Products; Key Laboratory of Chemical Biology (MOE); School of Pharmaceutical Sciences; Shandong University; Jinan Shandong 250012 China
| | - Wenxiao Wu
- Department of Medicinal Chemistry; Key Laboratory of Chemical Biology (MOE); School of Pharmaceutical Sciences; Shandong University; Jinan Shandong 250012 China
| | - Haixiu Bai
- Department of Medicinal Chemistry; Key Laboratory of Chemical Biology (MOE); School of Pharmaceutical Sciences; Shandong University; Jinan Shandong 250012 China
| | - Zhao Ma
- Department of Medicinal Chemistry; Key Laboratory of Chemical Biology (MOE); School of Pharmaceutical Sciences; Shandong University; Jinan Shandong 250012 China
| | - Yuemao Shen
- Department of Natural Products; Key Laboratory of Chemical Biology (MOE); School of Pharmaceutical Sciences; Shandong University; Jinan Shandong 250012 China
| | - Keqian Yang
- State Key Laboratory of Microbial Resources; Institute of Microbiology; Chinese Academy of Sciences; Beijing 100190 China
| | - Minyong Li
- Department of Medicinal Chemistry; Key Laboratory of Chemical Biology (MOE); School of Pharmaceutical Sciences; Shandong University; Jinan Shandong 250012 China
| |
Collapse
|
5
|
Zhang C, Sun C, Lu Y, Wang J, He X, Lu J, Yin S, Qiu H. A dithienosilole-based fluorescent chemosensor for multiple logic operations at the molecular level. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 150:731-736. [PMID: 26099823 DOI: 10.1016/j.saa.2015.06.021] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2015] [Accepted: 06/04/2015] [Indexed: 06/04/2023]
Abstract
A chemosensor consisting of two terpyridines covalently linked to a dithienosilole unit (1) has been synthesized, and its optical and metal sensing properties have been investigated. Due to the metal-organic coordination function, 1 can bind with many transition metal ions and display different fluorescence responses that cause it to function as a "turn-off" fluorescent chemosensor. A significant bathochromic shift in the fluorescence spectra is observed in the presence of Zn(2+). Meanwhile, the emission of 1 is weakened upon exposure to Ag(+) and Fe(2+) and completely quenched by Ni(2+), Co(2+), and Cu(2+). Based on the observed results, several logic gates, such as XNOR, INHIBIT, and IMPLICATION, have been achieved by controlling the chemical inputs.
Collapse
Affiliation(s)
- Chen Zhang
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 310036, PR China
| | - Caixia Sun
- Institute of Quality and Standard for Agro-products, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, PR China
| | - Yahong Lu
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 310036, PR China
| | - Junxing Wang
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 310036, PR China
| | - Xingxing He
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 310036, PR China
| | - Junting Lu
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 310036, PR China
| | - Shouchun Yin
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 310036, PR China.
| | - Huayu Qiu
- College of Material, Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou 310036, PR China.
| |
Collapse
|
6
|
Said AI, Georgiev NI, Bojinov VB. Sensor activity and logic behavior of dihydroxyphenyl hydrazone derivative as a chemosensor for Cu 2+ determination in alkaline aqueous solutions. J Photochem Photobiol A Chem 2015. [DOI: 10.1016/j.jphotochem.2015.05.035] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
|
7
|
Varghese B, Al-Busafi SN, Suliman FO, Al-Kindy SMZ. 3(2H)-Furanone as a promising scaffold for the synthesis of novel fluorescent organic dyes: an experimental and theoretical investigation. NEW J CHEM 2015. [DOI: 10.1039/c5nj00842e] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Novel 3(2H)-furanone compounds have been synthesised and characterized. Experimental and theoretical studies indicated that these compounds exhibit interesting solvatochromic effects.
Collapse
Affiliation(s)
- Beena Varghese
- Department of Chemistry
- College of Science
- Sultan Qaboos University
- Sultanate of Oman
| | - Saleh N. Al-Busafi
- Department of Chemistry
- College of Science
- Sultan Qaboos University
- Sultanate of Oman
| | | | - Salma M. Z. Al-Kindy
- Department of Chemistry
- College of Science
- Sultan Qaboos University
- Sultanate of Oman
| |
Collapse
|
8
|
Georgiev NI, Lyulev MP, Alamry KA, El-Daly SA, Taib LA, Bojinov VB. Synthesis, sensor activity, and logic behavior of a highly water-soluble 9,10-dihydro-7H-imidazo[1,2-b]benz[d,e]isoqionolin-7-one dicarboxylic acid. J Photochem Photobiol A Chem 2015. [DOI: 10.1016/j.jphotochem.2014.09.013] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
|
9
|
Yu F, Wang Y, Zhu W, Huang Y, Yang M, Ai H, Lu Z. A novel fluorescent pH probe with valuable pKabased on a twisted intramolecular charge transfer mechanism, and its applications in cell imaging. RSC Adv 2014. [DOI: 10.1039/c4ra06834c] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A novel TICT-mechanism based pH probe with valuable pKaof 5.32 has been developed. It is a promising visualizing agent for lysosomes in intracellular application.
Collapse
Affiliation(s)
- Fang Yu
- Key Laboratory of Green Chemistry and Technology of Ministry of Education
- College of Chemistry
- Sichuan University
- Chengdu, PR China
| | - Yan Wang
- Key Laboratory of Magnetic Resonance and Atomic and Molecular Systems
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics
- Wuhan Centre for Magnetic Resonance
- Wuhan Institute of Physics and Mathematics
- Chinese Academy of Sciences
| | - Wencheng Zhu
- National Engineering Research Center for Biomaterials
- Sichuan University
- Chengdu, PR China
| | - Yan Huang
- Key Laboratory of Green Chemistry and Technology of Ministry of Education
- College of Chemistry
- Sichuan University
- Chengdu, PR China
| | - Minghui Yang
- Key Laboratory of Magnetic Resonance and Atomic and Molecular Systems
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics
- Wuhan Centre for Magnetic Resonance
- Wuhan Institute of Physics and Mathematics
- Chinese Academy of Sciences
| | - Hua Ai
- National Engineering Research Center for Biomaterials
- Sichuan University
- Chengdu, PR China
| | - Zhiyun Lu
- Key Laboratory of Green Chemistry and Technology of Ministry of Education
- College of Chemistry
- Sichuan University
- Chengdu, PR China
| |
Collapse
|
10
|
Georgiev NI, Bojinov VB, Venkova AI. Design, Synthesis and pH Sensing Properties of Novel PAMAM Light-Harvesting Dendrons Based on Rhodamine 6G and 1,8-naphthalimide. J Fluoresc 2013; 23:459-71. [DOI: 10.1007/s10895-013-1168-z] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2012] [Accepted: 01/31/2013] [Indexed: 10/27/2022]
|
11
|
Li G, Zhu D, Liu Q, Xue L, Jiang H. Rapid Detection of Hydrogen Peroxide Based on Aggregation Induced Ratiometric Fluorescence Change. Org Lett 2013; 15:924-7. [DOI: 10.1021/ol4000845] [Citation(s) in RCA: 87] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Guoping Li
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190 P. R. China, and University of Chinese Academy of Sciences, Beijing, P. R. China
| | - Dongjian Zhu
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190 P. R. China, and University of Chinese Academy of Sciences, Beijing, P. R. China
| | - Qing Liu
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190 P. R. China, and University of Chinese Academy of Sciences, Beijing, P. R. China
| | - Lin Xue
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190 P. R. China, and University of Chinese Academy of Sciences, Beijing, P. R. China
| | - Hua Jiang
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190 P. R. China, and University of Chinese Academy of Sciences, Beijing, P. R. China
| |
Collapse
|
12
|
Georgiev NI, Lyulev MP, Bojinov VB. Sensor activity and logic behaviour of PET based dihydroimidazonaphthalimide diester. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2012; 97:512-520. [PMID: 22842131 DOI: 10.1016/j.saa.2012.06.053] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2011] [Revised: 05/01/2012] [Accepted: 06/05/2012] [Indexed: 06/01/2023]
Abstract
An ester terminated dihydroimidazonaphthalimide as multi-functional logic device is presented. Due to the optical changes as a function of pH this simple molecule is able to act as a molecular pH metre, a digital comparator and a half-adder. It was demonstrated that the dihydroimidazonaphthalimide comparator could be used as a fundamental element of an optical device for control of pH windows. Also, the ability of the device to detect metal ions in DMF and in water/DMF (3:1, v/v) at different pHs has been evaluated by monitoring the changes of its fluorescence intensity. Among the tested metal ions (Cd(2+), Co(2+), Cu(2+), Fe(3+), Ni(2+), Pb(2+), Zn(2+), Bi(3+), Hg(2+) and Ag(+)) only Fe(3+) and Bi(3+) were efficiently detected. In water/DMF (3:1, v/v) XOR and XNOR logic gates are presented using pH and Fe(3+) as chemical inputs based on encoding binary digits of logical conventions.
Collapse
Affiliation(s)
- Nikolai I Georgiev
- Department of Organic Synthesis, University of Chemical Technology and Metallurgy, 8 Kliment Ohridsky Str., 1756 Sofia, Bulgaria
| | | | | |
Collapse
|
13
|
Ma L, Qian J, Tian H, Lan M, Zhang W. A colorimetric and fluorescent dual probe for specific detection of cysteine based on intramolecular nucleophilic aromatic substitution. Analyst 2012; 137:5046-50. [PMID: 22970425 DOI: 10.1039/c2an35624d] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
4-Nitro-1,8-naphthalic anhydride (NNA) was used to distinguish cysteine from homocysteine and other potentially interfering thiols through a novel sequential substitution mechanism. The discrimination involves a blue-fluorescent thioether formation via nucleophilic aromatic substitution of the nitro group by thiol, followed by a second intramolecular nucleophilic aromatic substitution of alkylthio with the amino group to give the green-fluorescent 4-amino derivative. NNA is highly selective towards Cys, and the detection limit of Cys by this method is 0.3 μM.
Collapse
Affiliation(s)
- Limin Ma
- Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, PR China
| | | | | | | | | |
Collapse
|
14
|
Qian X, Xiao Y, Xu Y, Guo X, Qian J, Zhu W. “Alive” dyes as fluorescent sensors: fluorophore, mechanism, receptor and images in living cells. Chem Commun (Camb) 2010; 46:6418-36. [DOI: 10.1039/c0cc00686f] [Citation(s) in RCA: 283] [Impact Index Per Article: 20.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
|