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Abstract
Scanning ion conductance microscopy (SICM) has emerged as a versatile tool for studies of interfaces in biology and materials science with notable utility in biophysical and electrochemical measurements. The heart of the SICM is a nanometer-scale electrolyte filled glass pipette that serves as a scanning probe. In the initial conception, manipulations of ion currents through the tip of the pipette and appropriate positioning hardware provided a route to recording micro- and nanoscopic mapping of the topography of surfaces. Subsequent advances in instrumentation, probe design, and methods significantly increased opportunities for SICM beyond recording topography. Hybridization of SICM with coincident characterization techniques such as optical microscopy and faradaic electrodes have brought SICM to the forefront as a tool for nanoscale chemical measurement for a wide range of applications. Modern approaches to SICM realize an important tool in analytical, bioanalytical, biophysical, and materials measurements, where significant opportunities remain for further exploration. In this review, we chronicle the development of SICM from the perspective of both the development of instrumentation and methods and the breadth of measurements performed.
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Affiliation(s)
- Cheng Zhu
- Department of Chemistry, Indiana University, 800 E. Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Kaixiang Huang
- Department of Chemistry, Indiana University, 800 E. Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Natasha P Siepser
- Department of Chemistry, Indiana University, 800 E. Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Lane A Baker
- Department of Chemistry, Indiana University, 800 E. Kirkwood Avenue, Bloomington, Indiana 47405, United States
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Navikas V, Leitao SM, Grussmayer KS, Descloux A, Drake B, Yserentant K, Werther P, Herten DP, Wombacher R, Radenovic A, Fantner GE. Correlative 3D microscopy of single cells using super-resolution and scanning ion-conductance microscopy. Nat Commun 2021; 12:4565. [PMID: 34315910 PMCID: PMC8316521 DOI: 10.1038/s41467-021-24901-3] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2020] [Accepted: 07/14/2021] [Indexed: 02/07/2023] Open
Abstract
High-resolution live-cell imaging is necessary to study complex biological phenomena. Modern fluorescence microscopy methods are increasingly combined with complementary, label-free techniques to put the fluorescence information into the cellular context. The most common high-resolution imaging approaches used in combination with fluorescence imaging are electron microscopy and atomic-force microscopy (AFM), originally developed for solid-state material characterization. AFM routinely resolves atomic steps, however on soft biological samples, the forces between the tip and the sample deform the fragile membrane, thereby distorting the otherwise high axial resolution of the technique. Here we present scanning ion-conductance microscopy (SICM) as an alternative approach for topographical imaging of soft biological samples, preserving high axial resolution on cells. SICM is complemented with live-cell compatible super-resolution optical fluctuation imaging (SOFI). To demonstrate the capabilities of our method we show correlative 3D cellular maps with SOFI implementation in both 2D and 3D with self-blinking dyes for two-color high-order SOFI imaging. Finally, we employ correlative SICM/SOFI microscopy for visualizing actin dynamics in live COS-7 cells with subdiffraction-resolution.
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Affiliation(s)
- Vytautas Navikas
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, Swiss Federal InstSIitute of Technology Lausanne (EPFL), Lausanne, Switzerland
| | - Samuel M Leitao
- Laboratory for Bio- and Nano-Instrumentation, Institute of Bioengineering, School of Engineering, Swiss Federal Institute of Technology Lausanne (EPFL), Lausanne, Switzerland
| | - Kristin S Grussmayer
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, Swiss Federal InstSIitute of Technology Lausanne (EPFL), Lausanne, Switzerland
- Grussmayer Lab, Department of Bionanoscience, Faculty of Applied Science and Kavli Institute for Nanoscience Delft, Delft University of Technology, Delft, Netherlands
| | - Adrien Descloux
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, Swiss Federal InstSIitute of Technology Lausanne (EPFL), Lausanne, Switzerland
| | - Barney Drake
- Laboratory for Bio- and Nano-Instrumentation, Institute of Bioengineering, School of Engineering, Swiss Federal Institute of Technology Lausanne (EPFL), Lausanne, Switzerland
| | - Klaus Yserentant
- College of Medical and Dental Sciences, Medical School & School of Chemistry, University of Birmingham, Birmingham, United Kingdom
| | - Philipp Werther
- Institute of Pharmacy and Molecular Biotechnology, Heidelberg University, Heidelberg, Germany
| | - Dirk-Peter Herten
- College of Medical and Dental Sciences, Medical School & School of Chemistry, University of Birmingham, Birmingham, United Kingdom
| | - Richard Wombacher
- Institute of Pharmacy and Molecular Biotechnology, Heidelberg University, Heidelberg, Germany
- Department of Chemical Biology, Max Planck Institute for Medical Research, Heidelberg, Germany
| | - Aleksandra Radenovic
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, Swiss Federal InstSIitute of Technology Lausanne (EPFL), Lausanne, Switzerland.
| | - Georg E Fantner
- Laboratory for Bio- and Nano-Instrumentation, Institute of Bioengineering, School of Engineering, Swiss Federal Institute of Technology Lausanne (EPFL), Lausanne, Switzerland.
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Large magnitude of force leads to NO-mediated cell shrinkage in single osteocytes implying an initial apoptotic response. J Biomech 2021; 117:110245. [PMID: 33493709 DOI: 10.1016/j.jbiomech.2021.110245] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Revised: 11/06/2020] [Accepted: 01/03/2021] [Indexed: 11/22/2022]
Abstract
Damage accumulation in the bone under continuous daily loading causes local mechanical overloading known to induce osteocyte apoptosis, which promotes bone resorption to repair bone damage. However, only a few studies have investigated the mechanism of apoptosis in mechanically overloaded osteocytes. As mechanically stimulated osteocytes produce nitric oxide (NO), which triggers apoptosis in various cell types, we aimed to elucidate the mechanism underlying apoptosis in mechanically overloaded osteocytes, focusing on intracellular NO. To investigate the effects of force magnitude on apoptosis and intracellular NO production, we isolated osteocytes from DMP1-EGFP mice and subjected them to quantitative local forces via fibronectin-coated micro beads targeting integrin on the cell surface using a magnetic tweezer. Cell shrinkage was microscopically examined, and intracellular NO production was visualized using DAR-4 M. Mechanical stimulation revealed relationships between force magnitude, apoptosis, and intracellular NO production. The application of a smaller force resulted in no significant cell shrinkage or intracellular NO production; however, a larger force caused a rapid increase in intracellular NO production followed by cell shrinkage. Besides, intracellular NOS (NO synthase) inhibition and NO donation revealed the pro-apoptotic roles of NO in osteocytes. L-NAME (NOS inhibitor)-treated cells displayed no significant shrinkage under a larger force, whereas SNP (NO donor)-treated cells showed cell shrinkage and Annexin V fluorescence, indicating apoptosis. Collectively, our study demonstrates that larger force leads to NO production-mediated osteocyte shrinkage, implying an initial apoptotic response and highlighting the importance of NO production in bone damage.
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Bortner CD, Cidlowski JA. Ions, the Movement of Water and the Apoptotic Volume Decrease. Front Cell Dev Biol 2020; 8:611211. [PMID: 33324655 PMCID: PMC7723978 DOI: 10.3389/fcell.2020.611211] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Accepted: 11/04/2020] [Indexed: 12/20/2022] Open
Abstract
The movement of water across the cell membrane is a natural biological process that occurs during growth, cell division, and cell death. Many cells are known to regulate changes in their cell volume through inherent compensatory regulatory mechanisms. Cells can sense an increase or decrease in their cell volume, and compensate through mechanisms known as a regulatory volume increase (RVI) or decrease (RVD) response, respectively. The transport of sodium, potassium along with other ions and osmolytes allows the movement of water in and out of the cell. These compensatory volume regulatory mechanisms maintain a cell at near constant volume. A hallmark of the physiological cell death process known as apoptosis is the loss of cell volume or cell shrinkage. This loss of cell volume is in stark contrast to what occurs during the accidental cell death process known as necrosis. During necrosis, cells swell or gain water, eventually resulting in cell lysis. Thus, whether a cell gains or loses water after injury is a defining feature of the specific mode of cell death. Cell shrinkage or the loss of cell volume during apoptosis has been termed apoptotic volume decrease or AVD. Over the years, this distinguishing feature of apoptosis has been largely ignored and thought to be a passive occurrence or simply a consequence of the cell death process. However, studies on AVD have defined an underlying movement of ions that result in not only the loss of cell volume, but also the activation and execution of the apoptotic process. This review explores the role ions play in controlling not only the movement of water, but the regulation of apoptosis. We will focus on what is known about specific ion channels and transporters identified to be involved in AVD, and how the movement of ions and water change the intracellular environment leading to stages of cell shrinkage and associated apoptotic characteristics. Finally, we will discuss these concepts as they apply to different cell types such as neurons, cardiomyocytes, and corneal epithelial cells.
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Affiliation(s)
- Carl D. Bortner
- Signal Transduction Laboratory, Department of Health and Human Services, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, United States
| | - John A. Cidlowski
- Signal Transduction Laboratory, Department of Health and Human Services, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, United States
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Mugnano M, Memmolo P, Miccio L, Grilli S, Merola F, Calabuig A, Bramanti A, Mazzon E, Ferraro P. In vitro cytotoxicity evaluation of cadmium by label-free holographic microscopy. JOURNAL OF BIOPHOTONICS 2018; 11:e201800099. [PMID: 30079614 DOI: 10.1002/jbio.201800099] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2018] [Revised: 07/17/2018] [Accepted: 08/01/2018] [Indexed: 05/04/2023]
Abstract
Among all environmental pollutants, the toxic heavy metal cadmium is considered as a human carcinogen. Cadmium may induce cell death by apoptosis in various cell types, although the underlying mechanisms are still unclear. In this paper we show how a label-free digital holography (DH)-based technique is able to quantify the evolution of key biophysical parameters of cells during the exposure to cadmium for the first time. Murine embryonic fibroblasts NIH 3T3 are chosen here as cellular model for studying the cadmium effects. The results demonstrate that DH is able to retrieve the temporal evolution of different key parameters such as cell volume, projected area, cell thickness and dry mass, thus providing a full quantitative characterization of the cell physical behaviour during cadmium exposure. Our results show that the label-free character of the technique would allow biologists to perform systematic and reliable studies on cell death process induced by cadmium and we believe that more in general this can be easily extended to others heavy metals, thus avoiding the time-consuming, expensive and invasive label-based procedures used nowadays in the field. In fact, pollution by heavy metals is severe issue that needs rapid and reliable methods to be settled.
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Affiliation(s)
- Martina Mugnano
- Department of Physical Sciences and Technologies of Matter (DSFTM), CNR, Institute of Applied Science & Intelligent Systems (CNR-ISASI), Pozzuoli, Italy
| | - Pasquale Memmolo
- Department of Physical Sciences and Technologies of Matter (DSFTM), CNR, Institute of Applied Science & Intelligent Systems (CNR-ISASI), Pozzuoli, Italy
| | - Lisa Miccio
- Department of Physical Sciences and Technologies of Matter (DSFTM), CNR, Institute of Applied Science & Intelligent Systems (CNR-ISASI), Pozzuoli, Italy
| | - Simonetta Grilli
- Department of Physical Sciences and Technologies of Matter (DSFTM), CNR, Institute of Applied Science & Intelligent Systems (CNR-ISASI), Pozzuoli, Italy
| | - Francesco Merola
- Department of Physical Sciences and Technologies of Matter (DSFTM), CNR, Institute of Applied Science & Intelligent Systems (CNR-ISASI), Pozzuoli, Italy
| | - Alejandro Calabuig
- Department of Physical Sciences and Technologies of Matter (DSFTM), CNR, Institute of Applied Science & Intelligent Systems (CNR-ISASI), Pozzuoli, Italy
| | - Alessia Bramanti
- Department of Physical Sciences and Technologies of Matter (DSFTM), CNR, Institute of Applied Science & Intelligent Systems (CNR-ISASI), Pozzuoli, Italy
- Department of Physical Sciences and Technologies of Matter (DSFTM), IRCCS Centre for Neuroscience Bonino-Pulejo, Messina, Italy
| | - Emanuela Mazzon
- Department of Physical Sciences and Technologies of Matter (DSFTM), IRCCS Centre for Neuroscience Bonino-Pulejo, Messina, Italy
| | - Pietro Ferraro
- Department of Physical Sciences and Technologies of Matter (DSFTM), CNR, Institute of Applied Science & Intelligent Systems (CNR-ISASI), Pozzuoli, Italy
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Scanning ion conductance microscopy for visualizing the three-dimensional surface topography of cells and tissues. Semin Cell Dev Biol 2017; 73:125-131. [PMID: 28939037 DOI: 10.1016/j.semcdb.2017.09.024] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2017] [Revised: 09/17/2017] [Accepted: 09/18/2017] [Indexed: 02/01/2023]
Abstract
Scanning ion conductance microscopy (SICM), which belongs to the family of scanning probe microscopy, regulates the tip-sample distance by monitoring the ion current through the use of an electrolyte-filled nanopipette as the probing tip. Thus, SICM enables "contact-free" imaging of cell surface topography in liquid conditions. In this paper, we applied hopping mode SICM for obtaining topographical images of convoluted tissue samples such as trachea and kidney in phosphate buffered saline. Some of the SICM images were compared with the images obtained by scanning electron microscopy (SEM) after drying the same samples. We showed that the imaging quality of hopping mode SICM was excellent enough for investigating the three-dimensional surface structure of the soft tissue samples. Thus, SICM is expected to be used for imaging a wide variety of cells and tissues - either fixed or alive- at high resolution under physiologically relevant liquid conditions.
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Zhuang J, Jiao Y, Mugabo V. A new scanning mode to improve scanning ion conductance microscopy imaging rate with pipette predicted movement. Micron 2017; 101:177-185. [PMID: 28763735 DOI: 10.1016/j.micron.2017.07.007] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2017] [Revised: 07/15/2017] [Accepted: 07/15/2017] [Indexed: 11/29/2022]
Abstract
Scanning ion conductance microscopy (SICM) is a non-contact surface topography measurement technique that has been increasingly used for soft surfaces such as living biological samples. An approach-retract scanning (ARS) mode is widely used to avoid collision between the SICM probe (i.e., pipette) and an abrupt increase in sample profile. However, the redundant pipette trajectory in the ARS mode lengthens the scan time, thus reducing SICM efficiency and time resolution. To avoid this problem, a new scanning mode is discussed that adds horizontal movement at each measurement point to predict the upcoming sample topography via variation in ion current. The pipette then retracts in response to raised topography, while it raster scans flat or downhill topography. The feasibility was verified by finite element analysis and experimental tests on three kinds of soft samples: polydimethylsiloxane, mice cardiac fibroblasts, and breast cancer cells. The pixel detection frequency during imaging and the mean square error of the sample topography were compared for the two modes. The new scanning mode enhances the SICM imaging rate without loss of imaging quality or scanning stability, while it increases efficiency and time resolution. It thus has an improved performance for characterizing biological samples.
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Affiliation(s)
- Jian Zhuang
- Key Laboratory of Education Ministry for Modern Design Rotor-Bearing System, Xi'an Jiaotong University, Xi'an 710049, China; School of Mechanical Engineering, Xi'an Jiaotong University, Xi'an 710049, China.
| | - Yangbohan Jiao
- Key Laboratory of Education Ministry for Modern Design Rotor-Bearing System, Xi'an Jiaotong University, Xi'an 710049, China; School of Mechanical Engineering, Xi'an Jiaotong University, Xi'an 710049, China
| | - Vincent Mugabo
- Key Laboratory of Education Ministry for Modern Design Rotor-Bearing System, Xi'an Jiaotong University, Xi'an 710049, China; School of Mechanical Engineering, Xi'an Jiaotong University, Xi'an 710049, China
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Calabuig A, Mugnano M, Miccio L, Grilli S, Ferraro P. Investigating fibroblast cells under "safe" and "injurious" blue-light exposure by holographic microscopy. JOURNAL OF BIOPHOTONICS 2017; 10:919-927. [PMID: 27088256 DOI: 10.1002/jbio.201500340] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2015] [Revised: 02/26/2016] [Accepted: 03/18/2016] [Indexed: 05/26/2023]
Abstract
The exposure to visible light has been shown to exert various biological effects, such as erythema and retinal degeneration. However, the phototoxicity mechanisms in living cells are still not well understood. Here we report a study on the temporal evolution of cell morphology and volume during blue light exposure. Blue laser irradiation is switched during the operation of a digital holography (DH) microscope between what we call here "safe" and "injurious" exposure (SE & IE). The results reveal a behaviour that is typical of necrotic cells, with early swelling and successive leakage of the intracellular liquids when the laser is set in the "injurious" operation. In the phototoxicity investigation reported here the light dose modulation is performed through the very same laser light source adopted for monitoring the cell's behaviour by digital holographic microscope. We believe the approach may open the route to a deep investigation of light-cell interactions, with information about death pathways and threshold conditions between healthy and damaged cells when subjected to light-exposure. 3D Morphology and quantitative phase information from late stage of necrosis cell death.
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Affiliation(s)
- Alejandro Calabuig
- National Council of Research, Institute of Applied Science & Intelligent Systems (ISASI) 'E. Caianiello', Via Campi Flegrei 34, 80078, Pozzuoli (NA), Italy
- Department of Chemical, Materials and Industrial Production Engineering, University of Naples Federico II, P. le Tecchio 80, 80125, Napoli, Italy
| | - Martina Mugnano
- National Council of Research, Institute of Applied Science & Intelligent Systems (ISASI) 'E. Caianiello', Via Campi Flegrei 34, 80078, Pozzuoli (NA), Italy
- Department of Chemical, Materials and Industrial Production Engineering, University of Naples Federico II, P. le Tecchio 80, 80125, Napoli, Italy
| | - Lisa Miccio
- National Council of Research, Institute of Applied Science & Intelligent Systems (ISASI) 'E. Caianiello', Via Campi Flegrei 34, 80078, Pozzuoli (NA), Italy
| | - Simonetta Grilli
- National Council of Research, Institute of Applied Science & Intelligent Systems (ISASI) 'E. Caianiello', Via Campi Flegrei 34, 80078, Pozzuoli (NA), Italy
| | - Pietro Ferraro
- National Council of Research, Institute of Applied Science & Intelligent Systems (ISASI) 'E. Caianiello', Via Campi Flegrei 34, 80078, Pozzuoli (NA), Italy
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