1
|
Huseynov EZ, Akkurt M, Brito I, Bhattarai A, Rzayev RM, Asadov KA, Maharramov AM. Crystal structure and Hirshfeld surface analysis of 1-(2-amino-4-methyl-1,3-thia-zol-5-yl)ethan-1-one. Acta Crystallogr E Crystallogr Commun 2023; 79:890-894. [PMID: 37817958 PMCID: PMC10561208 DOI: 10.1107/s2056989023007181] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Accepted: 08/16/2023] [Indexed: 10/12/2023]
Abstract
In the title compound, C6H8N2OS, all atoms except for the methyl H atoms are coplanar, with a maximum deviation of 0.026 (4) Å. In the crystal, pairs of mol-ecules are linked by N-H⋯N hydrogen bonds, forming R 2 2(8) ring motifs. Dimers are connected by N-H⋯O hydrogen bonds, forming layers parallel to the (102) plane. Consolidating the mol-ecular packing, these layers are connected by C-H⋯π inter-actions between the center of the 1,3-thia-zole ring and the H atom of the methyl group attached to it, as well as C=O⋯π inter-actions between the center of the 1,3-thia-zole ring and the O atom of the carboxyl group. According to a Hirshfeld surface study, H⋯H (37.6%), O⋯H/H⋯O (16.8%), S⋯H/H⋯S (15.4%), N⋯H/H⋯N (13.0%) and C⋯H/H⋯C (7.6%) inter-actions are the most significant contributors to the crystal packing.
Collapse
Affiliation(s)
- Elnur Z. Huseynov
- Department of Chemistry, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| | - Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Türkiye
| | - Ivan Brito
- Departamento de Química, Facultad de Ciencias Básicas, Universidad de Antofagasta, Avenida Angamos 601, Casilla 170, Antofagasta 1240000, Chile
| | - Ajaya Bhattarai
- Department of Chemistry, M.M.A.M.C. (Tribhuvan University) Biratnagar, Nepal
| | - Rovnag M. Rzayev
- "Composite Materials" Scientific Research Center, Azerbaijan State Economic University (UNEC), H. Aliyev str. 135, Az1063, Baku, Azerbaijan
| | - Khammed A. Asadov
- Department of Chemistry, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| | - Abel M. Maharramov
- Department of Chemistry, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| |
Collapse
|
2
|
Huseynov EZ, Akkurt M, Brito I, Bhattarai A, Naghiyev FN, Asadov KA, Maharramov AM. Crystal structure and Hirshfeld surface analysis of 2-amino-5-{(1 E)-1-[(carbamo-thioyl-amino)-imino]eth-yl}-4-methyl-1,3-thia-zol-3-ium chloride monohydrate. Acta Crystallogr E Crystallogr Commun 2023; 79:808-812. [PMID: 37693676 PMCID: PMC10483551 DOI: 10.1107/s2056989023007090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Accepted: 08/11/2023] [Indexed: 09/12/2023]
Abstract
In the hydrated title salt, C7H12N5S2 +·Cl-·H2O, the asymmetric unit comprises one 2-amino-5-{(1E)-1-[(carbamo-thioyl-amino)-imino]-eth-yl}-4-methyl-1,3-thia-zol-3-ium cation, one chloride anion and one water mol-ecule of crystallization. The cation is nearly flat (r.m.s. deviation of non-H atoms is 0.0814 Å), with the largest deviation of 0.1484 (14) Å observed for one of the methyl C atoms. In the crystal, the cations are linked by O-H⋯Cl, N-H⋯Cl, N-H⋯O, N-H⋯S and C-H⋯S hydrogen bonds, forming a tri-periodic network. The most important contributions to the crystal packing are from H⋯H (35.4%), S⋯H/H⋯S (24.4%), N⋯H/H⋯N (8.7%), Cl⋯H/H⋯Cl (8.2%) and C⋯H/H⋯C (7.7%) inter-actions.
Collapse
Affiliation(s)
- Elnur Z. Huseynov
- Department of Chemistry, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| | - Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Türkiye
| | - Ivan Brito
- Departamento de Química, Facultad de Ciencias Básicas, Universidad de Antofagasta, Avenida Angamos 601, Casilla 170, Antofagasta 1240000, Chile
| | - Ajaya Bhattarai
- Department of Chemistry, M.M.A.M.C (Tribhuvan University) Biratnagar, Nepal
| | - Farid N. Naghiyev
- Department of Chemistry, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| | - Khammed A. Asadov
- Department of Chemistry, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| | - Abel M. Maharramov
- Department of Chemistry, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| |
Collapse
|
3
|
Sharma D, Kumar M, Kumar S, Basu A, Bhattacherjee D, Chaudhary A, Das P. Application of Cyclohexane‐1,3‐diones in the Synthesis of Six‐Membered Nitrogen‐Containing Heterocycles. ChemistrySelect 2022. [DOI: 10.1002/slct.202200622] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/08/2022]
Affiliation(s)
- Dharminder Sharma
- Department of Chemistry Jagdish Chandra DAV College Dasuya Punjab 144205 India
| | - Manish Kumar
- Department of Chemistry Govt. College Seraj at Lambathach 175048 HP Mandi India
- Chemical Technology Department CSIR-Institute of Himalayan Bioresource Technology Palampur 176061, HP India
| | - Sandeep Kumar
- Department of Chemistry DAV University Jalandhar 144012 Punjab India
- Chemical Technology Department CSIR-Institute of Himalayan Bioresource Technology Palampur 176061, HP India
| | - Amartya Basu
- Department of General Medicine Kalinga Institute of Medical Sciences Bhubaneswar 751024 Odisha India
| | - Dhananjay Bhattacherjee
- Chemical Technology Department CSIR-Institute of Himalayan Bioresource Technology Palampur 176061, HP India
| | - Abha Chaudhary
- Chemical Technology Department CSIR-Institute of Himalayan Bioresource Technology Palampur 176061, HP India
- Department of Chemistry Government Post Graduate College Ambala Cantt Haryana 133001 India
| | - Pralay Das
- Chemical Technology Department CSIR-Institute of Himalayan Bioresource Technology Palampur 176061, HP India
| |
Collapse
|
4
|
Dikusar EA, Akishina EA, Petkevich SK, Zhukouskaya NA, Alekseyev RS, Bumagin NA, Shahab SN, Filippovich LN, Potkin VI. Synthesis of Bisacridine Derivatives with Pyridine and 1,2-Azole Fragments. RUSS J GEN CHEM+ 2022. [DOI: 10.1134/s1070363222010078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
|
5
|
Naghiyev FN, Tereshina TA, Khrustalev VN, Akkurt M, Rzayev RM, Akobirshoeva AA, Mamedov İG. Crystal structure and Hirshfeld surface analysis of 6-amino-8-(2,6-di-chloro-phen-yl)-1,3,4,8-tetra-hydro-2 H-pyrido[1,2- a]pyrimidine-7,9-dicarbo-nitrile. Acta Crystallogr E Crystallogr Commun 2021; 77:516-521. [PMID: 34026256 PMCID: PMC8100256 DOI: 10.1107/s2056989021003583] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Accepted: 04/02/2021] [Indexed: 11/20/2022]
Abstract
In the mol-ecular structure of the title compound, C16H13Cl2N5, the 1,4-di-hydro-pyridine ring of the 1,3,4,8-tetra-hydro-2H-pyrido[1,2-a]pyrimidine ring system adopts a screw-boat conformation, while the 1,3-diazinane ring is puckered. In the crystal, inter-molecular N-H⋯N and C-H⋯N hydrogen bonds form mol-ecular sheets parallel to the (110) and (10) planes, crossing each other. Adjacent mol-ecules are further linked by C-H⋯π inter-actions, which form zigzag chains propagating parallel to [100]. A Hirshfeld surface analysis indicates that the most significant contributions to the crystal packing are from N⋯H/H⋯N (28.4%), H⋯H (24.5%), C⋯H/H⋯C (21.4%) and Cl⋯H/H⋯Cl (16.1%) contacts.
Collapse
Affiliation(s)
- Farid N. Naghiyev
- Department of Chemistry, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| | - Tatiana A. Tereshina
- Peoples’ Friendship University of Russia (RUDN University), Miklukho-Maklay St. 6, Moscow, 117198, Russian Federation
| | - Victor N. Khrustalev
- Peoples’ Friendship University of Russia (RUDN University), Miklukho-Maklay St. 6, Moscow, 117198, Russian Federation
- N. D. Zelinsky Institute of Organic Chemistry RAS, Leninsky Prosp. 47, Moscow, 119991, Russian Federation
| | - Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Turkey
| | - Rovnag M. Rzayev
- "Composite Materials" Scientific Research Center, Azerbaijan State Economic University (UNEC), H. Aliyev str. 135, Az 1063, Baku, Azerbaijan
| | - Anzurat A. Akobirshoeva
- Acad. Sci. Republ. Tadzhikistan, Kh. Yu. Yusufbekov Pamir Biol. Inst., 1 Kholdorova St, Khorog 736002, Gbao, Tajikistan
| | - İbrahim G. Mamedov
- Department of Chemistry, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| |
Collapse
|
6
|
Sahiba N, Sethiya A, Soni J, Agarwal S. Acridine‐1,8‐diones: Synthesis and Biological Applications. ChemistrySelect 2021. [DOI: 10.1002/slct.202004536] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Nusrat Sahiba
- Synthetic Organic Chemistry Laboratory Department of Chemistry, MLSU Udaipur 313001 India
| | - Ayushi Sethiya
- Synthetic Organic Chemistry Laboratory Department of Chemistry, MLSU Udaipur 313001 India
| | - Jay Soni
- Synthetic Organic Chemistry Laboratory Department of Chemistry, MLSU Udaipur 313001 India
| | - Shikha Agarwal
- Synthetic Organic Chemistry Laboratory Department of Chemistry, MLSU Udaipur 313001 India
| |
Collapse
|
7
|
Duruskari GS, Khalilov AN, Mammadova GZ, Çelikesir ST, Akkurt M, Akobirshoeva AA, Maharramov AM. Crystal structure and Hirshfeld surface analysis of ( E)-3-[(4-methyl-benzyl-idene)amino]-5-phenylthiazolidin-2-iminium bromide N, N-di-methyl-formamide monosolvate. ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS 2020; 76:1694-1698. [PMID: 33117592 PMCID: PMC7534233 DOI: 10.1107/s2056989020012712] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Accepted: 09/18/2020] [Indexed: 11/25/2022]
Abstract
In the crystal, each cation is connected to two anions by N—H⋯ Br hydrogen bonds, forming an (8) motif parallel to the (10) plane, while the N,N-dimethylformamide molecules are linked to the cations by C—H⋯O contacts. In the cation of the title salt, C17H18N3S+·Br−·C3H7NO, the central thiazolidine ring adopts an envelope conformation with puckering parameters Q(2) = 0.310 (3) Å and φ(2) = 42.2 (6)°. In the crystal, each cation is connected to two anions by N—H⋯ Br hydrogen bonds, forming an R42(8) motif parallel to the (10) plane. van der Waals interactions between the cations, anions and N,N-dimethylformamide molecules further stabilize the crystal structure in three dimensions. The most important contributions to the surface contacts are from H⋯H (55.6%), C⋯H/H⋯C (17.9%) and Br⋯H/H⋯Br (7.0%) interactions, as concluded from a Hirshfeld analysis.
Collapse
Affiliation(s)
- Gulnara Sh Duruskari
- Organic Chemistry Department, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| | - Ali N Khalilov
- Organic Chemistry Department, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan.,Department of Physics and Chemistry, "Composite Materials" Scientific Research Center, Azerbaijan State Economic University (UNEC), H. Aliyev str. 135, Az 1063, Baku, Azerbaijan
| | - Gunay Z Mammadova
- Organic Chemistry Department, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| | | | - Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Turkey
| | - Anzurat A Akobirshoeva
- Academy of Science of the Republic of Tadzhikistan, Kh. Yu. Yusufbekov Pamir Biology Institute, 1 Kholdorova St, Khorog 736002, Gbao, Tajikistan
| | - Abel M Maharramov
- Organic Chemistry Department, Baku State University, Z. Khalilov str. 23, Az, 1148 Baku, Azerbaijan
| |
Collapse
|
8
|
Mohareb RM, Megally Abdo NY, Gamaan MS. Uses of cyclohexan‐1,3‐dione for the synthesis of tetrahydrochromeno[3,4‐
c
]chromen derivatives with anti‐tumor activities. J Heterocycl Chem 2020. [DOI: 10.1002/jhet.3966] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Rafat M. Mohareb
- Department of Chemistry, Faculty of ScienceCairo University Giza Egypt
| | | | - Marwa S. Gamaan
- Department of Chemistry, Faculty of ScienceCairo University Giza Egypt
| |
Collapse
|
9
|
Uses of dimedone for the synthesis of new heterocyclic derivatives with anti-tumor, c-Met, tyrosine, and Pim-1 kinases inhibitions. Med Chem Res 2018. [DOI: 10.1007/s00044-018-2208-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
|
10
|
Aqua-mediated synthesis of acridinediones with reusable silica-supported sulfuric acid as an efficient catalyst. JOURNAL OF TAIBAH UNIVERSITY FOR SCIENCE 2018. [DOI: 10.1016/j.jtusci.2014.03.003] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|
11
|
Mallu L, Thirumalai D, Asharani IV. One-pot cascade synthesis and in vitro evaluation of anti-inflammatory and antidiabetic activities of S-methylphenyl substituted acridine-1,8-diones. Chem Biol Drug Des 2017; 90:520-526. [PMID: 28294548 DOI: 10.1111/cbdd.12973] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2016] [Revised: 01/28/2017] [Accepted: 02/28/2017] [Indexed: 11/27/2022]
Abstract
Various S-methylphenyl substituted acridine-1,8-dione series (4a-i) were synthesized through a one-pot cascade synthetic approach involving the reaction of 4-(methylthio)benzaldehyde and dimedone with a variety of amines as nitrogen source under reflux in ethanol. All the synthesized derivatives were characterized by using spectroscopic methods. In vitro evaluations of anti-inflammatory and antidiabetic efficacies of all the synthesized compounds were investigated. The anti-inflammatory results infer that the compounds 4c and 4d are showing excellent activity with an inhibition percentage of 80.58 ± 0.42, 81.72 ± 1.72 by membrane stabilization and 77.72 ± 0.76, 78.76 ± 0.81 by albumin denaturation methods, which is comparable with the standard diclofenac at a concentration of 100 μg/ml. Further, the antidiabetic assay revealed the moderate activity for the synthesized compounds at a concentration of 100 μg/ml with respect to their standard drug, acarbose.
Collapse
Affiliation(s)
- Lavanya Mallu
- Department of Chemistry, School of Advanced Sciences, VIT University, Vellore, Tamil Nadu, India
| | | | | |
Collapse
|
12
|
Green and efficient synthesis of acridine-1,8-diones and hexahydroquinolines via a KH2PO4 catalyzed Hantzsch-type reaction in aqueous ethanol. RESEARCH ON CHEMICAL INTERMEDIATES 2016. [DOI: 10.1007/s11164-016-2814-2] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
13
|
Pugazhenthi I, Ghouse SM, Nawaz Khan FR, Jeong ED, Bae JS, Kim JP, Chung EH, Kumar YS, Dasaradhan C. Water mediated reactions: TiO2and ZnO nanoparticle catalyzed multi component domino reaction in the synthesis of tetrahydroacridinediones, acridindiones, xanthenones and xanthenes. RSC Adv 2015. [DOI: 10.1039/c4ra13045f] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Tetrahydroacridine-1,8-(2H,5H,9H,10H)-diones4from 1,3-cyclohexanedione and/or dimedone 1,2-chloro-3-formylquinoline2and anilines3in water at 90 °C were obtained by domino reaction approach.
Collapse
Affiliation(s)
- Ilangovan Pugazhenthi
- Organic and Medicinal Chemistry Research Laboratory
- Organic Chemistry Division
- School of Advanced Sciences
- VIT-University
- Vellore 632 014
| | - Shaik Mohammed Ghouse
- Organic and Medicinal Chemistry Research Laboratory
- Organic Chemistry Division
- School of Advanced Sciences
- VIT-University
- Vellore 632 014
| | - Fazlur-Rahman Nawaz Khan
- Organic and Medicinal Chemistry Research Laboratory
- Organic Chemistry Division
- School of Advanced Sciences
- VIT-University
- Vellore 632 014
| | - Euh Duck Jeong
- Korea Basic Science Institute
- Busan Center
- Busan 618 230
- South Korea
| | - Jong Seong Bae
- Korea Basic Science Institute
- Busan Center
- Busan 618 230
- South Korea
| | - Jong-Pil Kim
- Korea Basic Science Institute
- Busan Center
- Busan 618 230
- South Korea
| | - Eun Hyuk Chung
- Korea Basic Science Institute
- Busan Center
- Busan 618 230
- South Korea
| | - Yadavalli Suneel Kumar
- Organic and Medicinal Chemistry Research Laboratory
- Organic Chemistry Division
- School of Advanced Sciences
- VIT-University
- Vellore 632 014
| | - Changalraya Dasaradhan
- Organic and Medicinal Chemistry Research Laboratory
- Organic Chemistry Division
- School of Advanced Sciences
- VIT-University
- Vellore 632 014
| |
Collapse
|
14
|
Poly(4-Vinylpyridinium)Hydrogen Sulfate Catalyzed an Efficient and Ecofriendly Protocol for the One-Pot Multicomponent Synthesis of 1,8-Acridinediones in Aqueous Medium. J CHEM-NY 2013. [DOI: 10.1155/2013/850254] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Highly efficient, ecofriendly, and improved protocol for the synthesis of 1,8-acridinediones has been developedviaone-pot multicomponent condensation of 1,3-cyclohexanedione/dimedone, aromatic aldehydes, and ammonium acetate utilizing poly(4-vinylpyridinium)hydrogen sulfate as catalyst in aqueous medium. Excellent yields in shorter reaction time, simple work-up procedure, easy recovery, and reusability of the catalyst are attractive features of this green protocol.
Collapse
|