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Bonyadi F, Kavruk M, Ucak S, Cetin B, Bayramoglu G, Dursun AD, Arica Y, Ozalp VC. Real-Time Biosensing Bacteria and Virus with Quartz Crystal Microbalance: Recent Advances, Opportunities, and Challenges. Crit Rev Anal Chem 2023; 54:2888-2899. [PMID: 37191651 DOI: 10.1080/10408347.2023.2211164] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Continuous monitoring of pathogens finds applications in environmental, medical, and food industry settings. Quartz crystal microbalance (QCM) is one of the promising methods for real-time detection of bacteria and viruses. QCM is a technology that utilizes piezoelectric principles to measure mass and is commonly used in detecting the mass of chemicals adhering to a surface. Due to its high sensitivity and rapid detection times, QCM biosensors have attracted considerable attention as a potential method for detecting infections early and tracking the course of diseases, making it a promising tool for global public health professionals in the fight against infectious diseases. This review first provides an overview of the QCM biosensing method, including its principle of operation, various recognition elements used in biosensor creation, and its limitations and then summarizes notable examples of QCM biosensors for pathogens, focusing on microfluidic magnetic separation techniques as a promising tool in the pretreatment of samples. The review explores the use of QCM sensors in detecting pathogens in various samples, such as food, wastewater, and biological samples. The review also discusses the use of magnetic nanoparticles for sample preparation in QCM biosensors and their integration into microfluidic devices for automated detection of pathogens and highlights the importance of accurate and sensitive detection methods for early diagnosis of infections and the need for point-of-care approaches to simplify and reduce the cost of operation.
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Affiliation(s)
- Farzaneh Bonyadi
- Department of Histology and Embryology, Faculty of Medicine, Baskent University, Ankara, Turkey
| | - Murat Kavruk
- Department of Medical Biology, School of Medicine, Istanbul Aydin University, Istanbul, Turkey
| | - Samet Ucak
- Department of Medical Biology, School of Medicine, Istanbul Aydin University, Istanbul, Turkey
| | - Barbaros Cetin
- Department of Mechanical Engineering, Bilkent University, Ankara, Turkey
| | | | - Ali D Dursun
- Department of Physiology, School of Medicine, Atilim University, Ankara, Turkey
| | - Yakup Arica
- Department of Chemistry, Gazi University, Ankara, Turkey
| | - Veli C Ozalp
- Department of Histology and Embryology, Faculty of Medicine, Baskent University, Ankara, Turkey
- Department of Medical Biology, School of Medicine, Atilim University, 06830, Ankara, Turkey
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Miranda-Martínez A, Sufrate-Vergara B, Fernández-Puntero B, Alcaide-Martin MJ, Buño-Soto A, Serrano-Olmedo JJ. ANN-Based Discernment of Septic and Inflammatory Synovial Fluid: A Novel Method Using Viscosity Data from a QCR Sensor. SENSORS (BASEL, SWITZERLAND) 2022; 22:9413. [PMID: 36502129 PMCID: PMC9740680 DOI: 10.3390/s22239413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Revised: 11/08/2022] [Accepted: 11/30/2022] [Indexed: 06/17/2023]
Abstract
The synovial fluid (SF) analysis involves a series of chemical and physical studies that allow opportune diagnosing of septic, inflammatory, non-inflammatory, and other pathologies in joints. Among the variety of analyses to be performed on the synovial fluid, the study of viscosity can help distinguish between these conditions, since this property is affected in pathological cases. The problem with viscosity measurement is that it usually requires a large sample volume, or the necessary instrumentation is bulky and expensive. This study compares the viscosity of normal synovial fluid samples with samples with infectious and inflammatory pathologies and classifies them using an ANN (Artificial Neural Network). For this purpose, a low-cost, portable QCR-based sensor (10 MHz) was used to measure the viscous responses of the samples by obtaining three parameters: Δf, ΔΓ (parameters associated with the viscoelastic properties of the fluid), and viscosity calculation. These values were used to train the algorithm. Different versions of the ANN were compared, along with other models, such as SVM and random forest. Thirty-three samples of SF were analyzed. Our study suggests that the viscosity characterized by our sensor can help distinguish infectious synovial fluid, and that implementation of ANN improves the accuracy of synovial fluid classification.
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Affiliation(s)
- Andrés Miranda-Martínez
- Centre for Biomedical Technology (CTB), Universidad Politécnica de Madrid (UPM), 28040 Madrid, Spain
| | - Berta Sufrate-Vergara
- Department of Clinical Analysis-Emergency, Hospital Universitario La Paz (HULP), 28046 Madrid, Spain
| | - Belén Fernández-Puntero
- Department of Clinical Analysis-Emergency, Hospital Universitario La Paz (HULP), 28046 Madrid, Spain
| | - María José Alcaide-Martin
- Department of Clinical Analysis-Emergency, Hospital Universitario La Paz (HULP), 28046 Madrid, Spain
| | - Antonio Buño-Soto
- Department of Clinical Analysis-Emergency, Hospital Universitario La Paz (HULP), 28046 Madrid, Spain
| | - José Javier Serrano-Olmedo
- Centre for Biomedical Technology (CTB), Universidad Politécnica de Madrid (UPM), 28040 Madrid, Spain
- Networking Research Center of Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Universidad Politécnica de Madrid (UPM), 28040 Madrid, Spain
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Viscosity Measurement Sensor: A Prototype for a Novel Medical Diagnostic Method Based on Quartz Crystal Resonator. SENSORS 2021; 21:s21082743. [PMID: 33924605 PMCID: PMC8070455 DOI: 10.3390/s21082743] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Revised: 04/08/2021] [Accepted: 04/09/2021] [Indexed: 12/26/2022]
Abstract
Viscosity variation in human fluids, such as Synovial Fluid (SF) or Cerebrospinal Fluid (CSF), can be used as a diagnostic factor; however, the sample volume obtained for analysis is usually small, making it difficult to measure its viscosity. On the other hand, Quartz Crystal Resonators (QCR) have been used widely in sensing applications due to their accuracy, cost, and size. This work provides the design and validation of a new viscosity measurement system based on quartz crystal resonators for low volume fluids, leading to the development of a sensor called “ViSQCT” as a prototype for a new medical diagnostic tool. The proposed method is based on measuring the resonance frequency at the crystal’s maximum conductance point through a frequency sweep, where crystals with 10 MHz fundamental resonance frequency were used. For validation purposes, artificial fluids were developed to simulate SFs and CFs in healthy and pathological conditions as experiment phantoms. A commercial QCR based system was also used for validation since its methodology differs from ours. A conventional rotational viscometer was used as a reference for calibration purposes. ViSQCT demonstrates the capability to measure the sample’s viscosity differentiation between healthy and pathological fluid phantoms and shows that it can be used as a basis for a diagnostic method of several pathologies related to the studied biological fluids. However, some performance differences between both QCR-based systems compared to the reference system deserves further investigation.
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Gravimetric Viral Diagnostics: QCM Based Biosensors for Early Detection of Viruses. CHEMOSENSORS 2017. [DOI: 10.3390/chemosensors5010007] [Citation(s) in RCA: 72] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Ahumada LAC, González MXR, Sandoval OLH, Olmedo JJS. Evaluation of Hyaluronic Acid Dilutions at Different Concentrations Using a Quartz Crystal Resonator (QCR) for the Potential Diagnosis of Arthritic Diseases. SENSORS 2016; 16:s16111959. [PMID: 27879675 PMCID: PMC5134618 DOI: 10.3390/s16111959] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/10/2016] [Revised: 09/30/2016] [Accepted: 10/20/2016] [Indexed: 12/04/2022]
Abstract
The main objective of this article is to demonstrate through experimental means the capacity of the quartz crystal resonator (QCR) to characterize biological samples of aqueous dilutions of hyaluronic acid according to their viscosity and how this capacity may be useful in the potential diagnosis of arthritic diseases. The synovial fluid is viscous due to the presence of hyaluronic acid, synthesized by synovial lining cells (type B), and secreted into the synovial fluid thus making the fluid viscous. In consequence, aqueous dilutions of hyaluronic acid may be used as samples to emulate the synovial fluid. Due to the viscoelastic and pseudo-plastic behavior of hyaluronic acid, it is necessary to use the Rouse model in order to obtain viscosity values comparable with viscometer measures. A Fungilab viscometer (rheometer) was used to obtain reference measures of the viscosity in each sample in order to compare them with the QCR prototype measures.
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Affiliation(s)
- Luis Armando Carvajal Ahumada
- Center for Biomedical Technology (CTB), Technical University of Madrid (UPM), 28040 Madrid, Spain.
- Networking Research Center of Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Technical University of Madrid (UPM), 28040 Madrid, Spain.
- Research and Technological Development Center of Electrical, Electronic and ICT Industry (CIDEI), 111311 Bogotá, Colombia.
- Faculty of Engineering and Basic Sciences, Central University, 111711 Bogotá, Colombia.
| | - Marco Xavier Rivera González
- Center for Biomedical Technology (CTB), Technical University of Madrid (UPM), 28040 Madrid, Spain.
- Networking Research Center of Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Technical University of Madrid (UPM), 28040 Madrid, Spain.
| | - Oscar Leonardo Herrera Sandoval
- Research and Technological Development Center of Electrical, Electronic and ICT Industry (CIDEI), 111311 Bogotá, Colombia.
- Faculty of Engineering and Basic Sciences, Central University, 111711 Bogotá, Colombia.
| | - José Javier Serrano Olmedo
- Center for Biomedical Technology (CTB), Technical University of Madrid (UPM), 28040 Madrid, Spain.
- Networking Research Center of Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Technical University of Madrid (UPM), 28040 Madrid, Spain.
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Sun Y, Xu L, Zhang F, Song Z, Hu Y, Ji Y, Shen J, Li B, Lu H, Yang H. A promising magnetic SERS immunosensor for sensitive detection of avian influenza virus. Biosens Bioelectron 2016; 89:906-912. [PMID: 27818055 DOI: 10.1016/j.bios.2016.09.100] [Citation(s) in RCA: 64] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2016] [Revised: 09/12/2016] [Accepted: 09/27/2016] [Indexed: 10/20/2022]
Abstract
Avian influenza viruses infect a great number of global populations every year and can lead to severe epidemics with high morbidity and mortality. Facile, rapid and sensitive detection of viruses is very crucial to control the viral spread at its early stage. In this work, we developed a novel magnetic immunosensor based on surface enhanced Raman scattering (SERS) spectroscopy to detect intact but inactivated influenza virus H3N2 (A/Shanghai/4084T/2012) by constructing a sandwich complex consisting of SERS tags, target influenza viruses and highly SERS-active magnetic supporting substrates. The procedure of sample pretreatment could be significantly simplified since the magnetic supporting substrates allowed the enrichment and separation of viruses from a complex matrix. With a portable Raman spectrometer, the immunosensor could detect H3N2 down to 102TCID50/mL (TCID50 refers to tissue culture infection dose at 50% end point), with a good linear relationship from 102 to 5×103 TCID50/mL. Considering its time efficiency, portability and sensitivity, the proposed SERS-based magnetic immunoassay is very promising for a point-of-care (POC) test in clinical and diagnostic praxis.
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Affiliation(s)
- Yang Sun
- Department of Infectious Diseases, Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, China; Institute of Arthritis Research, Guanghua Integrative Medicine Hospital, Shanghai 200052, China; Shanghai TargetDrug Ltd., Shanghai 201202, China
| | - Li Xu
- The Education Ministry Key Lab of Resource Chemistry, Shanghai Key Laboratory of Rare Earth Functional Materials, Shanghai Municipal Education Committee Key Laboratory of Molecular Imaging Probes and Sensors and Department of Chemistry, Shanghai Normal University, Shanghai 200234, China
| | - Fengdi Zhang
- Department of Infectious Diseases, Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, China
| | - Zhigang Song
- Department of Pathogen Diagnosis and Biosafety, Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, China
| | - Yunwen Hu
- Department of Pathogen Diagnosis and Biosafety, Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, China
| | - Yongjia Ji
- Department of Infectious Diseases, Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, China
| | - Jiayin Shen
- Department of Infectious Diseases, Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, China
| | - Ben Li
- Shanghai TargetDrug Ltd., Shanghai 201202, China
| | - Hongzhou Lu
- Department of Infectious Diseases, Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, China.
| | - Haifeng Yang
- The Education Ministry Key Lab of Resource Chemistry, Shanghai Key Laboratory of Rare Earth Functional Materials, Shanghai Municipal Education Committee Key Laboratory of Molecular Imaging Probes and Sensors and Department of Chemistry, Shanghai Normal University, Shanghai 200234, China.
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Karash S, Wang R, Kelso L, Lu H, Huang TJ, Li Y. Rapid detection of avian influenza virus H5N1 in chicken tracheal samples using an impedance aptasensor with gold nanoparticles for signal amplification. J Virol Methods 2016; 236:147-156. [PMID: 27452670 DOI: 10.1016/j.jviromet.2016.07.018] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2015] [Revised: 06/03/2016] [Accepted: 07/19/2016] [Indexed: 01/10/2023]
Abstract
Highly pathogenic avian influenza virus H5N1 is a continuous threat to public health and poultry industry. The recurrence of the H5N1 led us to develop a robust, specific, and rapid detection method for the virus. In this study, an impedance aptasensor was developed for the virus detection using specific H5N1 aptamer and a gold interdigitated microelectrode. Streptavidin was immobilized on the microelectrode surface and biotin labeled H5N1 aptamer was bound to the immobilized streptavidin. The microelectrode was blocked with the polyethylene glycol and the bound aptamer captured the virus. The impedance change caused by the captured virus was measured using an impedance analyzer. To enhance impedance signal, a nanoparticle-based amplifier was designed and implemented by forming a network-like gold nanoparticles/H5N1-aptamer/thiocyanuric acid. The detection limit of the impedance aptasensor was 0.25 HAU for the pure virus and 1 HAU for the tracheal chicken swab samples spiked with the H5N1 virus. The detection time of aptasensor without employing the amplifier was less than an hour. The amplifier increased impedance by a 57-fold for the 1 HAU samples. Only negligible impedance change was observed for non-target viruses such as H5N2, H5N3, H7N2, H1N1, and H2N2. This aptasensor provides a foundation for the development of a portable aptasensor instrument.
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Affiliation(s)
- Sardar Karash
- Cell and Molecular Biology Program, University of Arkansas, Fayetteville, AR 72701, USA
| | - Ronghui Wang
- Department of Biological and Agricultural Engineering, University of Arkansas, Fayetteville, AR 72701, USA
| | - Lisa Kelso
- Center of Excellence for Poultry Science, University of Arkansas, Fayetteville, AR 72701, USA
| | - Huaguang Lu
- Animal Diagnostic Laboratory, State University, State College, PA 16802, USA
| | - Tony Jun Huang
- Department of Engineering Science and Mechanics & Material Research Institute, Pennsylvania State University, State College, PA 16802, USA
| | - Yanbin Li
- Cell and Molecular Biology Program, University of Arkansas, Fayetteville, AR 72701, USA; Department of Biological and Agricultural Engineering, University of Arkansas, Fayetteville, AR 72701, USA; Center of Excellence for Poultry Science, University of Arkansas, Fayetteville, AR 72701, USA.
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Kim YK, Lim SI, Choi S, Cho IS, Park EH, An DJ. A novel assay for detecting canine parvovirus using a quartz crystal microbalance biosensor. J Virol Methods 2015; 219:23-27. [PMID: 25813597 PMCID: PMC7119597 DOI: 10.1016/j.jviromet.2015.03.015] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2014] [Revised: 03/12/2015] [Accepted: 03/16/2015] [Indexed: 11/25/2022]
Abstract
ProLinker™ B, Calixcrown derivatives, makes antibody positioned be more regular with the right orientation on gold-coated quartz surface. The ProLinker-coated QCM showed a superior sensitivity and could detect at low CPV concentration than commercial immunochromatography Ag kit. The QCM biosensor described herein is eminently suitable for the rapid diagnosis of CPV infection with high sensitivity and specificity.
Rapid and accurate diagnosis is crucial to reduce both the shedding and clinical signs of canine parvovirus (CPV). The quartz crystal microbalance (QCM) is a new tool for measuring frequency changes associated with antigen–antibody interactions. In this study, the QCM biosensor and ProLinker™ B were used to rapidly diagnosis CPV infection. ProLinker™ B enables antibodies to be attached to a gold-coated quartz surface in a regular pattern and in the correct orientation for antigen binding. Receiver operating characteristics (ROC) curves were used to set a cut-off value using reference CPVs (two groups: one CPV-positive and one CPV-negative). The ROC curves overlapped and the point of intersection was used as the cut-off value. A QCM biosensor with a cut-off value of −205 Hz showed 95.4% (104/109) sensitivity and 98.0% (149/152) specificity when used to test 261 field fecal samples compared to PCR. In conclusion, the QCM biosensor described herein is eminently suitable for the rapid diagnosis of CPV infection with high sensitivity and specificity. Therefore, it is a promising analytical tool that will be useful for clinical diagnosis, which requires rapid and reliable analyses.
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Affiliation(s)
- Yong Kwan Kim
- Viral Disease Division, Animal and Plant Quarantine Agency, Anyang, Gyeonggi-do, 430-757, Republic of Korea
| | - Seong-In Lim
- Viral Disease Division, Animal and Plant Quarantine Agency, Anyang, Gyeonggi-do, 430-757, Republic of Korea
| | - Sarah Choi
- Viral Disease Division, Animal and Plant Quarantine Agency, Anyang, Gyeonggi-do, 430-757, Republic of Korea
| | - In-Soo Cho
- Viral Disease Division, Animal and Plant Quarantine Agency, Anyang, Gyeonggi-do, 430-757, Republic of Korea
| | - Eun-Hye Park
- The Catholic University of Korea, Gyeonggi-do, 420-743, Republic of Korea
| | - Dong-Jun An
- Viral Disease Division, Animal and Plant Quarantine Agency, Anyang, Gyeonggi-do, 430-757, Republic of Korea.
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