Spatial requirements of jaguars and pumas in Southern Mexico

A review of environmental and anthropogenic variables used to model jaguar occurrence

Jaguars (Panthera onca) are a landscape species of conservation importance and our understanding of environmental and anthropogenic drivers of jaguar occurrence is necessary to improve conservation strategies. We reviewed available literature to simply describe environmental and anthropogenic variables used and found to be significant in occurrence modeling. We reviewed 95 documents published from 1980 to 2021 that focused on jaguar occurrence and that used 39 variable types (21 anthropogenic, 18 environmental) among different techniques, scales, and approaches. In general, these variables included both anthropogenic (roads, land use, human activities, and population) and environmental (climate, vegetation, ecological interactions, topographic, water, and others) factors. Twelve variables were identified as affecting jaguar occurrence overall, eleven at local scale and seven at broad scales (regional and continental). Focusing more specifically on the variables that correlate with occurrence should help researchers to make better predictions in areas without quantitative jaguar data.

Unveiling demographic and mating strategies of Panthera onca in the Pantanal, Brazil

We conducted the first long-term and large-scale study of demographic characteristics and reproductive behavior in a wild jaguar (Panthera onca) population. Data were collected through a combination of direct observations and camera trapping on a study area that operates both as a cattle ranch and ecotourism destination. Jaguars exhibited two birth peaks: April/May and October/November, that are the end and the beginning of the wet season in the Pantanal, respectively. The average litter size was 1.43 ± 0.65. Single cubs made up a total of 65.7% of the births, and we found a slight predominance of females (1.15:1 ratio) in litters. The mean age at independence was 17.6 ± 0.98 months, with sex-biased dispersal, with all males (n = 27) leaving the natal home range and 63.6% of females exhibiting philopatry. The interbirth intervals were 21.8 ± 3.2 months and the mean age at first parturition was 31.8 ± 4.2 months. Our results estimated a lifetime reproductive success for female jaguars of 8.13 cubs. Our observations also indicate that female jaguars can display mating behavior during cub rearing or pregnancy, representing 41.4% of the consorts and copulations recorded. We speculate that this behavior has evolved as a defense against infanticide and physical harm to the female. To our knowledge, this is the first time that such behavior is described for this species. All aggressive interactions between females involved the presence of cubs, following the offspring–defense hypothesis, that lead to territoriality among females in mammals, regardless of food availability. In the face of growing threats to this apex predator, this work unveils several aspects of its natural history, representing a baseline for comparison with future research and providing critical information for population viability analysis and conservation planning in the long term.

The Use of Camera Traps and Auxiliary Satellite Telemetry to Estimate Jaguar Population Density in Northwestern Costa Rica

Simple Summary

We used data from a grid of camera traps, combined with satellite telemetry data from one female jaguar, to estimate jaguar population density in northwestern Costa Rica. Our estimate of 2.6 females and 5.0 males per 100 km² was influenced by camera placement and sex of the jaguar, and indicated the importance of telemetry data to improve field design and parameter estimation. We recommend population assessments of at least 3 consecutive months, expanding the survey area to one several times the size of an individual’s home range, and including sex and camera placement considerations to reduce bias in jaguar density estimates.

Abstract

Regular evaluation of jaguar (Panthera onca) population status is an important part of conservation decision-making. Currently, camera trapping has become the standard method used to estimate jaguar abundance and demographic parameters, though evidence has shown the potential for sex ratio biases and density overestimates. In this study, we used camera trap data combined with satellite telemetry data from one female jaguar to estimate jaguar population density in the dry forest of Santa Rosa National Park in the Guanacaste Conservation Area of northwestern Costa Rica. We analyzed camera trap data collected from June 2016 to June 2017 using spatial capture-recapture methods to estimate jaguar density. In total, 19 individual jaguars were detected (11 males; 8 females) with a resulting estimated population density of 2.6 females (95% [CI] 1.7–4.0) and 5.0 male (95% [CI] 3.4–7.4) per 100 km². Based on telemetry and camera trap data, camera placement might bias individual detections by sex and thus overall density estimates. We recommend population assessments be made at several consecutive 3-month intervals, that larger areas be covered so as not to restrict surveys to one or two individual home ranges, as in our case, and to carry out long-term camera monitoring programs instead of short-term studies to better understand the local population, using auxiliary telemetry data to adjust field designs and density estimations to improve support for jaguar conservation strategies.

Jaguar (Panthera onca) spatial ecology outside protected areas in the Selva Maya

Jaguars (Panthera onca) are endangered in several countries and a priority species for conservation action. Despite extensive research efforts in Mexico most studies have been associated with natural protected areas far from human habitation. Because protected areas are too few to conserve the jaguar population over the long–term, a landscape approach that includes both protected and unprotected lands is needed. This is the case in Quintana Roo State where an ecological corridor linking two protected areas (Yum Balam and Sian Ka'an) is at risk of disappearing due to tourism–driven activities. Between 2013 and 2015, four male jaguars were captured and monitored using satellite telemetry inside the corridor. The mean home range size (± SD) was 101.5 km2 (± 75.9 km2) for the dry season and 172 km2 (± 107.29 km2) for the rainy season. The mean core area size (± SD) was 17.54 km2 (± 16.21 km2) for the dry season and 29.07 km2 (± 16.19 km2) for the rainy season. No significant seasonal differences were found for home ranges or for core areas. As expected, we observed that jaguars preferred forest or young secondary growth over profusely disturbed areas, using whatever vegetation was available in their home ranges. Although it is not protected, a biological corridor linking Yum Balam and Sian Ka'an still holds its own jaguar population, a population that has learned to coexist with human presence. Conservation actions are recommended at landscape level to maintain what remains of tropical mature forest and to promote the development of long–term secondary growth into close tree canopy

Puma concolor potential distribution and connectivity in the Colombian Llanos

Understanding species distribution to target biodiversity conservation actions in countries with high biodiversity, scarce data availability and low study sites accessibility is very challenging. These issues limit management and conservation actions even on charismatic and potentially conflictive species like large carnivores. We developed a geographic assessment of the potential distribution, core patches and connectivity areas for Puma concolor in the Colombian Llanos (Orinoco region). To create this geographic representation, we used methodological approaches that work with scarce information and still provide a spatially-explicit distribution that could be used by stakeholders. Our results show the importance that the Llanos region has for the conservation of the species and the potential role that can have to ensure a resident long-term population. Based on our approach, more than 50,000 km2 (near to 30% of the study area) can be still considered as core habitats for the species, and most of them are still connected, with spatial gaps lower than the estimated dispersal distance of the species and several remaining steppingstones. Further research is required to validate our analysis and we expect our results can target research and conservation priorities within the region.

Not only range, but quality: human influence and protected areas within the distribution of mammal species subject to use in the Department of Cundinamarca, Colombia

Mammal conservation in transformed landscapes depends heavily on the role of protected areas, especially for species used by local communities both within and around these areas. We evaluated the level of representation and the magnitude of the influence of humans, via human footprint, across the range of mammals used by local communities in the Department of Cundinamarca, Colombia. We emphasised the differences of the human influence at a department scale and inside Protected Areas (PA). The definition of species used by local communities refers to using a resource for its economic, religious and/or traditional value. Specifically, we addressed whether there is a difference between the magnitude of human influence inside and outside the PAs and if the impact is greater on threatened species, species with greater or lesser representation or according to their use. We found 43 species subject to use in our analysis, with low values of representation when compared with global targets (X̄ ± CD = 10.69% ± 4.99) and with high values of vulnerability, based on the mean value of the Spatial Human Footprint Index (HSFI) (57 ± 2.74). We found a difference of 10.72 points between the average HSFI of the Department and that of the PAs (X̄ ± CD = 10.73 ± 5.98%). This shows that the status of each species’ habitats is less impacted by human activities within PAs and that the conservation areas for all species depend largely on their presence in largely transformed landscapes. Although this seems an expected outcome, the Department of Cundinamarca is one of the less represented on PAs at a national level and has suffered from severe fragmentation; thus, our results highlight the need for improving and expanding the current PA system as most species, especially those subject to use, will depend on their existence for their conservation on the long run.

Density and habitat use of one of the last jaguar populations of the Brazilian Atlantic Forest: Is there still hope?

The jaguar (Panthera onca) plays an important role in maintaining biodiversity and ecological processes. We evaluated the status of a jaguar population in one of the last stronghold habitats for its conservation in the Atlantic Forest, the Rio Doce State Park (RDSP). We used a random survey design from 2016/17 to estimate jaguar abundance and density as well as its occupancy and detection probabilities in the entire Park's area. To monitor for temporal fluctuations in density and abundance, we used a systematic survey design in the southern portion of the Park where jaguars were more recorded when using the random approach. We then conducted two surveys in 2017/18 and 2020. Our 2016/17 random survey revealed that jaguar density (0.11 ± SE 0.28 individuals/100 km2) was the lowest obtained for the species across the Atlantic Forest. We noticed that jaguar density increased three times from 2017/18 (0.55 ± SE 0.45 individuals/100 km2) to 2020 (1.61 ± SE 0.6 individuals/100 km2). Jaguar occupancy and detection probability were 0.40 and 0.08, respectively. The low jaguar occupancy probability was positively associated with smaller distances from lakes and records of potential prey. The detection probability was positively associated with prey detection, the rainy season, and smaller distances from lakes. Our work contributes to a growing awareness of the potential conservation value of a protected area in a human-dominated landscape as one of the last strongholds for jaguars across the Atlantic Forest.

Environmental and anthropogenic factors synergistically affect space use of jaguars

Large terrestrial carnivores have undergone some of the largest population declines and range reductions of any species, which is of concern as they can have large effects on ecosystem dynamics and function.^1-4 The jaguar (Panthera onca) is the apex predator throughout the majority of the Neotropics; however, its distribution has been reduced by >50% and it survives in increasingly isolated populations.⁵ Consequently, the range-wide management of the jaguar depends upon maintaining core populations connected through multi-national, transboundary cooperation, which requires understanding the movement ecology and space use of jaguars throughout their range.^6-8 Using GPS telemetry data for 111 jaguars from 13 ecoregions within the four biomes that constitute the majority of jaguar habitat, we examined the landscape-level environmental and anthropogenic factors related to jaguar home range size and movement parameters. Home range size decreased with increasing net productivity and forest cover and increased with increasing road density. Speed decreased with increasing forest cover with no sexual differences, while males had more directional movements, but tortuosity in movements was not related to any landscape factors. We demonstrated a synergistic relationship between landscape-scale environmental and anthropogenic factors and jaguars' spatial needs, which has applications to the conservation strategy for the species throughout the Neotropics. Using large-scale collaboration, we overcame limitations from small sample sizes typical in large carnivore research to provide a mechanism to evaluate habitat quality for jaguars and an inferential modeling framework adaptable to the conservation of other large terrestrial carnivores.

Temporal and spatial segregation of top predators (Felidae) in a Mexican tropical Biosphere Reserve

Jaguars, Panthera onca (Linnaeus, 1758), and pumas, Puma concolor (Linnaeus, 1771) are the largest felids in the neotropics. Both can overlap in niche axes (time, space and prey), and are therefore potentially competing species. Segregation mechanisms presented by a low overlap in one of these axes of niche can facilitate the coexistence. Our aim was to analyze jaguar and puma temporal and spatial overlap for understanding their segregation mechanisms. Between 2015 and 2017, twenty-six camera trap stations were located in five habitat types of El Cielo Biosphere Reserve (ECBR) in northeastern Mexico. Temporal activity was analyzed using circular statistics and time overlap analysis. Spatial overlap was calculated with the Pianka index and a selectivity habitat analysis. Our results showed that jaguars and pumas were nocturnal and that the temporal overlap was high (∆4 = 0.77). We found an intermediate spatial overlap (Pianka index = 0.61). Jaguars were more selective and preferred the deciduous forest. In comparison, pumas preferred oak-pine forest, but also used oak and deciduous forest. Our results indicate that spatial segregation best explains the coexistence of jaguars and pumas in our study area, probably due to both habitat diversity in the reserve and the generalist habits of the puma.

Jaguars and pumas exhibit distinct spatiotemporal responses to human disturbances in Colombia’s most imperiled ecoregion

Coexistence of sympatric felids is facilitated by mutual avoidance and the partitioning of habitats, prey, and time. Anthropogenic disturbances disrupt this coexistence in fragmented landscapes, potentially triggering cascading influences in ecological communities. We used photographic data from 8,717 trap nights (November 2014–June 2016) at 87 camera trap sites in Colombia’s middle Magdalena River basin to compare spatiotemporal overlap among jaguars (Panthera onca), pumas (Puma concolor), their prey, and humans, at sites of high and low disturbance, as determined by the human influence index. Human disturbance events (e.g., domestic dogs, livestock, and humans, including armed hunters) comprised 38% of all photographs at high disturbance sites and 29% of all photographs at low disturbance sites. Differential spatiotemporal overlaps were recorded between felids and their prey at high versus low disturbance sites, with jaguars exhibiting only 13% temporal overlap with humans at high disturbance sites. Among prey, temporal overlap was greater than spatial overlap for both felids across the study area. Compared to jaguars, pumas displayed more temporal overlap with all anthropogenic variables and more spatial overlap with most anthropogenic variables, suggesting lesser sensitivity to human disturbances. This study provides the first insights into the responses of a threatened large carnivore, jaguar, to camera trap-derived human disturbance variables in an unprotected landscape. It also highlights the importance of using multiple disturbance types for evaluating human impacts on large carnivores.

Jaguar (Panthera onca) density and tenure in a critical biological corridor

We estimated jaguar density and tenure, and investigated ranging behavior, using camera traps across the Maya Forest Corridor, a human-influenced landscape in central Belize that forms the only remaining connection for jaguar populations inhabiting two regional forest blocks: the Selva Maya and the Maya Mountain Massif. Jaguars were ubiquitous across the study area. Similar to the neighboring Selva Maya, mean density ranged from 1.5 to 3.1 jaguars per 100 km2, estimated by spatial capture-recapture models. Cameras detected almost twice as many males as females, probably reflecting detection bias, and males ranged more widely than females within the camera grid. Both sexes crossed two major rivers, while highway crossings were rare and male-biased, raising concern that the highway could prevent female movement if traffic increases. Jaguars were more transient where the landscape was fragmented with settlements and agriculture than in contiguous forest. Compared with jaguars in the protected forests of the Maya Mountains, jaguars in central Belize displayed a lower potential for investment in intraspecific communication, indicative of a lower quality landscape; however, we did detect mating behavior and juveniles. Tenure of individuals was shorter than in the protected forests, with a higher turnover rate for males than females. At least three-quarters of reported jaguar deaths caused by people were male jaguars, and the majority was retaliation for livestock predation. Jaguars seem relatively tolerant to the human-influenced landscape of central Belize. However, intensification of game hunting and lethal control of predators would threaten population persistence, while increased highway traffic and clear-cutting riparian forest would severely limit the corridor function. Our results show that the viability of the corridor, and thus the long-term survival of jaguar populations in this region, will depend on appropriate land-use planning, nonlethal control of livestock predators, enforcement of game hunting regulations, and wildlife-friendly features in future road developments.

Biospytial: spatial graph-based computing for ecological Big Data

BACKGROUND

The exponential accumulation of environmental and ecological data together with the adoption of open data initiatives bring opportunities and challenges for integrating and synthesising relevant knowledge that need to be addressed, given the ongoing environmental crises.

FINDINGS

Here we present Biospytial, a modular open source knowledge engine designed to import, organise, analyse and visualise big spatial ecological datasets using the power of graph theory. The engine uses a hybrid graph-relational approach to store and access information. A graph data structure uses linkage relationships to build semantic structures represented as complex data structures stored in a graph database, while tabular and geospatial data are stored in an efficient spatial relational database system. We provide an application using information on species occurrences, their taxonomic classification and climatic datasets. We built a knowledge graph of the Tree of Life embedded in an environmental and geographical grid to perform an analysis on threatened species co-occurring with jaguars (Panthera onca).

CONCLUSIONS

The Biospytial approach reduces the complexity of joining datasets using multiple tabular relations, while its scalable design eases the problem of merging datasets from different sources. Its modular design makes it possible to distribute several instances simultaneously, allowing fast and efficient handling of big ecological datasets. The provided example demonstrates the engine's capabilities in performing basic graph manipulation, analysis and visualizations of taxonomic groups co-occurring in space. The example shows potential avenues for performing novel ecological analyses, biodiversity syntheses and species distribution models aided by a network of taxonomic and spatial relationships.

Population genetic structure and habitat connectivity for jaguar (Panthera onca) conservation in Central Belize

BACKGROUND

Connectivity among jaguar (Panthera onca) populations will ensure natural gene flow and the long-term survival of the species throughout its range. Jaguar conservation efforts have focused primarily on connecting suitable habitat in a broad-scale. Accelerated habitat reduction, human-wildlife conflict, limited funding, and the complexity of jaguar behaviour have proven challenging to maintain connectivity between populations effectively. Here, we used non-invasive genetic sampling and individual-based conservation genetic analyses to assess genetic diversity and levels of genetic connectivity between individuals in the Cockscomb Basin Wildlife Sanctuary and the Maya Forest Corridor. We used expert knowledge and scientific literature to develop models of landscape permeability based on circuit theory with fine-scale landscape features as ecosystem types, distance to human settlements and roads to predict the most probable jaguar movement across central Belize.

RESULTS

We used 12 highly polymorphic microsatellite loci to identify 50 individual jaguars. We detected high levels of genetic diversity across loci (HE = 0.61, HO = 0.55, and NA = 9.33). Using Bayesian clustering and multivariate models to assess gene flow and genetic structure, we identified one single group of jaguars (K = 1). We identified critical areas for jaguar movement that fall outside the boundaries of current protected areas in central Belize. We detected two main areas of high landscape permeability in a stretch of approximately 18 km between Sittee River Forest Reserve and Manatee Forest Reserve that may increase functional connectivity and facilitate jaguar dispersal from and to Cockscomb Basin Wildlife Sanctuary. Our analysis provides important insights on fine-scale genetic and landscape connectivity of jaguars in central Belize, an area of conservation concern.

CONCLUSIONS

The results of our study demonstrate high levels of relatively recent gene flow for jaguars between two study sites in central Belize. Our landscape analysis detected corridors of expected jaguar movement between the Cockscomb Basin Wildlife Sanctuary and the Maya Forest Corridor. We highlight the importance of maintaining already established corridors and consolidating new areas that further promote jaguar movement across suitable habitat beyond the boundaries of currently protected areas. Continued conservation efforts within identified corridors will further maintain and increase genetic connectivity in central Belize.

First assessment of the conservation status of the jaguarPanthera oncain the Sierra Madre de Chiapas, Mexico

Although the Near Threatened jaguarPanthera oncaranges from the south-west USA to central Argentina, populations outside Amazonia are generally small and isolated. One such area, the Sierra Madre de Chiapas in the state of Chiapas, Mexico, is potentially an important area for jaguar conservation but information on the species in this region is limited and its conservation status is unknown. In this study we documented the occurrence and abundance of jaguars in the Sierra Madre de Chiapas complex. We compiled all available records of the species within the region and conducted a camera-trap survey during August 2015–December 2016. Interviews were conducted to determine the perception of the jaguar by cattle owners and to obtain information on any livestock predation. We found that jaguars still occur throughout the Sierra Madre de Chiapas landscape, including the plains on the Pacific Coast of Chiapas, but its abundance in the region is low. On the basis of our findings we have incorporated the Sierra Madre de Chiapas in Mexico's National Jaguar Conservation Strategy, and recommend that international organizations include this area in their priorities for jaguar conservation. To improve coexistence between jaguars and the communities of the Sierra Madre de Chiapas, strategies need to be developed, in collaboration with the local communities, to improve livestock practices for reduction of predation by jaguars, to strengthen government conservation policies and to implement educational and communication programmes about the importance of this species in the region.