Genetic relationships of wild boars highlight the importance of Southern Iran in forming a comprehensive picture of the species’ phylogeography

Introduced, Mixed, and Peripheral: Conservation of Mitochondrial-DNA Lineages in the Wild Boar (Sus scrofa L.) Population in the Urals

Translocations and introductions are important events that allow organisms to overcome natural barriers. The genetic background of colonization success and genetic consequences of the establishment of populations in new environments are of great interest for predicting species’ colonization success. The wild boar has been introduced into many parts of the world. We analyzed sequences of the mitochondrial-DNA control region in the wild boars introduced into the Ural region and compared them with sequences from founder populations (from Europe, the Caucasus, Central Asia, and the Far East). We found that the introduced population has high genetic diversity. Haplotypes from all the major phylogenetic clades were detected in the analyzed group of the animals from the Urals. In this group, no haplotypes identical to Far Eastern sequences were detectable despite a large number of founders from that region. The contribution of lineages originating from Eastern Europe was greater than expected from the proportions (%) of European and Asian animals in the founder populations. This is the first study on the genetic diversity and structure of a wild boar population of mixed origin at the northern periphery of this species’ geographical range.

Modeling habitat suitability of bats to identify high priority areas for field monitoring and conservation

Bats provide important ecosystem services but face severe threats due to land and climate changes. Although bats are an important component of mammal diversity in Iran, the ecology of many species remains virtually unstudied in the country. Here we applied the maximum entropy approach to model habitat suitability of bat species in Iran, identify the most important variables for their distribution, predict high priority areas for field monitoring and conservation, and estimate the coverage of the bat species' suitable habitats by the existing protected areas. We created a richness map for the twelve species to identify high priority areas for field monitoring and conservation. The results of species distribution modeling showed that Pipistrellus kuhlii (828,977.2 km²) and Miniopterus pallidus (646,581.9 km²) had the largest distribution ranges and Rhinopoma microphyllum (211,202.7 km²) and Rousettus aegyptiacus (218,278.6 km²) had the smallest distribution ranges in Iran. By averaging the importance of each ecological variable across the 12 species, we found that distance to forests (with a negative association) is the most important ecological driver of bat distribution in Iran. The Zagros Mountains were identified as a hotspot of bats based on the distribution of the 12 species. Our findings showed that small proportions of each species suitable habitats were covered by protected areas and protected suitable habitats varied from 3.2%for Pipistrellus kuhlii to15.9% for Tadarida teniotis. This study highlights the importance of forests for bat conservation showing that forest conservation is a high priority in the country. Areas which have the highest richness should be prioritized for field monitoring and conservation.

Reptile species richness associated to ecological and historical variables in Iran

Spatial gradients of species richness can be shaped by the interplay between historical and ecological factors. They might interact in particularly complex ways in heterogeneous mountainous landscapes with strong climatic and geological contrasts. We mapped the distribution of 171 lizard species to investigate species richness patterns for all species (171), diurnal species (101), and nocturnal species (70) separately. We related species richness with the historical (past climate change, mountain uplifting) and ecological variables (climate, topography and vegetation). We found that assemblages in the Western Zagros Mountains, north eastern and north western parts of Central Iranian Plateau have the highest number of lizard species. Among the investigated variables, annual mean temperature explained the largest variance for all species (10%) and nocturnal species (31%). For diurnal species, temperature change velocity shows strongest explained variance in observed richness pattern (26%). Together, our results reveal that areas with annual temperature of 15–20 °C, which receive 400–600 mm precipitation and experienced moderate level of climate change since the Last Glacial Maximum (LGM) have highest number of species. Documented patterns of our study provide a baseline for understanding the potential effect of ongoing climate change on lizard diversity in Iran.

Asia-wide phylogeography of wild boar (Sus scrofa) based on mitochondrial DNA and Y-chromosome: Revising the migration routes of wild boar in Asia

Genetics of pigs has been well studied in Europe and Asia, but most of previous studies of molecular phylogeny of Sus scrofa have been based on sequences of both wild and domestic forms. In this study we analysed genetic traits of Sus scrofa from 13 regions in Asia (including previously undisclosed Eastern Caucasus and Trans-Baikal regions) using purely wild boar samples. Mitochondrial control region and Y-chromosome genes (AMELY & USP9Y) were employed to resolve phylogeographic relationships. We discussed spatio-temporal dynamics of wild boar distribution and compared molecular data to morphological and cytogenetic data on wild boar variability and taxonomy. A total of 51 haplotypes were detected in mtDNA control region and five haplotypes were found in combined sequences of Y-chromosome genes. The phylogeography of Asia-wide wild boars supported a hypothesis of migration from South-East Asia to South Asia, followed by migration to East and West Asia. We present a hypothesis about independent dispersal of wild boars into West Asia from South and North-East Asia. Mitochondrial DNA phylogeny generally fits the morphologically based intraspecies taxonomy. Distribution of chromosomal variants of wild boar presently does not show clear correlation with mtDNA clades.