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Benikhlef R, Chaouch M, Abid MB, Aoun K, Harrat Z, Bouratbine A, BenAbderrazak S. ITS1
and cpb genetic polymorphisms in Algerian and Tunisian
Leishmania infantum
isolates from humans and dogs. Zoonoses Public Health 2022; 70:201-212. [PMID: 36443904 DOI: 10.1111/zph.13016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 11/18/2022] [Accepted: 11/18/2022] [Indexed: 11/30/2022]
Abstract
Leishmania (L.) infantum strains, isolated from varying hosts and clinical manifestations (cutaneous, visceral and canine leishmaniasis), were investigated in order to understand the genetic polymorphisms within this species in Algeria and Tunisia. Two DNA-based typing methods were tested in order to evaluate their effectiveness against Multilocus enzyme electrophoresis (MLEE), widely considered as the reference method for Leishmania parasite typing. On the other hand, MLEE is cumbersome, high-cost, time consuming and frequently does not detect intra-species genetic polymorphisms. In this work, we used two molecular target regions to discriminate L. infantum strains, Internal transcribed spacer 1 (ITS1) and the cysteine proteinase B (cpb). The ITS1 region offers good resolution for Leishmania discrimination but does not spotlight intra-species polymorphisms. In contrast, cpbE and cpbF PCR-Sequencing demonstrated a certain variability within CL and VL Algerian and Tunisian L. infantum isolates. Following phylogenetic analyses of 44 L. infantum isolates, two main groups were identified, a group with 39 bp deletion in the cpb sequence, composed of cutaneous, visceral and canine isolates from both countries with no significant clinical or geographic distribution; these samples were typed as MON-1, MON-24, and MON-80 zymodemes. A second group which presents a clear clusterization of Tunisian cutaneous strains belonging to the L. infantum MON-24. This group, with no deletion in the mature domain of the cpb gene sequence, should be further explored with a higher number of samples.
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Affiliation(s)
- Razika Benikhlef
- Laboratoire d'Eco‐épidémiologie Parasitaire et Génétique des Populations, Route du Petit Staoueli Institut Pasteur d'Algérie Dely‐Brahim Algeria
- Laboratoire de Recherche Parasitologie Médicale, Biotechnologies et Biomolécules, LR 20‐IPT‐06, Institut Pasteur de Tunis Université Tunis El Manar Tunis Tunisia
| | - Melek Chaouch
- Laboratoire de Recherche Parasitologie Médicale, Biotechnologies et Biomolécules, LR 20‐IPT‐06, Institut Pasteur de Tunis Université Tunis El Manar Tunis Tunisia
- Laboratory of Bioinformatics, Biomathematics and Biostatistics, LR 16 IPT 09 Institut Pasteur de Tunis Tunis Tunisia
| | - Meriem Ben Abid
- Laboratoire de Recherche Parasitologie Médicale, Biotechnologies et Biomolécules, LR 20‐IPT‐06, Institut Pasteur de Tunis Université Tunis El Manar Tunis Tunisia
| | - Karim Aoun
- Laboratoire de Recherche Parasitologie Médicale, Biotechnologies et Biomolécules, LR 20‐IPT‐06, Institut Pasteur de Tunis Université Tunis El Manar Tunis Tunisia
- Laboratoire d'Epidémiologie et d'Ecologie Parasitaires Institut Pasteur de Tunis Tunis Tunisia
| | - Zoubir Harrat
- Laboratoire d'Eco‐épidémiologie Parasitaire et Génétique des Populations, Route du Petit Staoueli Institut Pasteur d'Algérie Dely‐Brahim Algeria
- Laboratoire Biodiversité Et Environnement: Interactions, Génomes USTHB Bab Ezzouar Algeria
| | - Aida Bouratbine
- Laboratoire de Recherche Parasitologie Médicale, Biotechnologies et Biomolécules, LR 20‐IPT‐06, Institut Pasteur de Tunis Université Tunis El Manar Tunis Tunisia
| | - Souha BenAbderrazak
- Laboratoire de Recherche Parasitologie Médicale, Biotechnologies et Biomolécules, LR 20‐IPT‐06, Institut Pasteur de Tunis Université Tunis El Manar Tunis Tunisia
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Laboratory diagnostics for human Leishmania infections: a polymerase chain reaction-focussed review of detection and identification methods. Parasit Vectors 2022; 15:412. [PMID: 36335408 PMCID: PMC9636697 DOI: 10.1186/s13071-022-05524-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2022] [Accepted: 10/02/2022] [Indexed: 11/08/2022] Open
Abstract
Leishmania infections span a range of clinical syndromes and impact humans from many geographic foci, but primarily the world's poorest regions. Transmitted by the bite of a female sand fly, Leishmania infections are increasing with human movement (due to international travel and war) as well as with shifts in vector habitat (due to climate change). Accurate diagnosis of the 20 or so species of Leishmania that infect humans can lead to the successful treatment of infections and, importantly, their prevention through modelling and intervention programs. A multitude of laboratory techniques for the detection of Leishmania have been developed over the past few decades, and although many have drawbacks, several of them show promise, particularly molecular methods like polymerase chain reaction. This review provides an overview of the methods available to diagnostic laboratories, from traditional techniques to the now-preferred molecular techniques, with an emphasis on polymerase chain reaction-based detection and typing methods.
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Kumari D, Perveen S, Sharma R, Singh K. Advancement in leishmaniasis diagnosis and therapeutics: An update. Eur J Pharmacol 2021; 910:174436. [PMID: 34428435 DOI: 10.1016/j.ejphar.2021.174436] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2021] [Revised: 08/10/2021] [Accepted: 08/16/2021] [Indexed: 12/11/2022]
Abstract
Leishmaniasis is regarded as a neglected tropical disease by World Health Organization (WHO) and is ranked next to malaria as the deadliest protozoan disease. The primary causative agents of the disease comprise of diverse leishmanial species sharing clinical features ranging from skin abrasions to lethal infection in the visceral organs. As several Leishmania species are involved in infection, the role of accurate diagnosis becomes pivotal in adding new dimensions to anti-leishmanial therapy. Diagnostic methods must be fast, reliable, easy to perform, highly sensitive, and specific to differentiate among similar parasitic diseases. Herein, we present the conventional and recent approaches impended for the disease diagnosis and their sensitivity, specificity, and clinical application in parasite detection. Furthermore, we have also elaborated various new methods to cure leishmaniasis, which include host-directed therapies, drug repurposing, nanotechnology, and combinational therapy. This review addresses novel techniques and innovations in leishmaniasis, which can aid in unraveling new strategies to fight against the deadly infection.
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Affiliation(s)
- Diksha Kumari
- Infectious Diseases Division, CSIR- Indian Institute of Integrative Medicine, Jammu, 180001, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Summaya Perveen
- Infectious Diseases Division, CSIR- Indian Institute of Integrative Medicine, Jammu, 180001, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Rashmi Sharma
- Infectious Diseases Division, CSIR- Indian Institute of Integrative Medicine, Jammu, 180001, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Kuljit Singh
- Infectious Diseases Division, CSIR- Indian Institute of Integrative Medicine, Jammu, 180001, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
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El Kacem S, Kbaich MA, Daoui O, Charoute H, Mhaidi I, Ejghal R, Barhoumi M, Guizani I, Bennani H, Lemrani M. Multilocus sequence analysis provides new insight into population structure and genetic diversity of Leishmania tropica in Morocco. INFECTION GENETICS AND EVOLUTION 2021; 93:104932. [PMID: 34023510 DOI: 10.1016/j.meegid.2021.104932] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Revised: 05/12/2021] [Accepted: 05/18/2021] [Indexed: 11/29/2022]
Abstract
Cutaneous leishmaniasis (CL) is one of the most neglected tropical diseases, caused by different Leishmania species. Despite its high incidence in Morocco, CL due to Leishmania tropica is poorly understood in terms of its epidemiological status and population structure. In this study, we used multilocus sequence typing (MLST) in order to explore the genetic heterogeneity of L. tropica strains. Samples (N = 48) were collected from CL patients in two localities in Morocco (Foum Jamaa in the Azilal province and Imintanoute in Chichaoua province). PCR-sequencing of 18 strains was carried out for six housekeeping genes (cytb, me, fh, g6pd, pgd and gpi), Genetic diversity indices showed a high population genetic differentiation between and among populations. There was no shared haplotypes between the two localities studied. Our results reveal a considerable degree of differentiation through the relatively high FST value (> 0.4) and remarkable intraspecific polymorphism (S = 29). Imintanoute strains have more polymorphisms (S = 22) than the Foum Jamaa strains despite their small sample size. These results provide crucial background information of epidemiology in Imintanoute which raises questions about animal involvement in L. tropica transmission cycle.
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Affiliation(s)
- Sofia El Kacem
- Laboratory of Parasitology and Vector-Borne-Diseases, Institut Pasteur du Maroc, Casablanca, Morocco; Laboratory of Biology and Health, Faculty of Sciences Ben M'Sik, Hassan II University, Casablanca, Morocco
| | - Mouad Ait Kbaich
- Laboratory of Parasitology and Vector-Borne-Diseases, Institut Pasteur du Maroc, Casablanca, Morocco; Molecular Genetics and Immunophysiopathology research team, Health and Environment Laboratory, Hassan II University of Casablanca, Aïn Chock Faculty of Sciences, Morocco
| | - Othmane Daoui
- Laboratory of Parasitology and Vector-Borne-Diseases, Institut Pasteur du Maroc, Casablanca, Morocco; Molecular Genetics and Immunophysiopathology research team, Health and Environment Laboratory, Hassan II University of Casablanca, Aïn Chock Faculty of Sciences, Morocco
| | - Hicham Charoute
- Bio-Informatics Department, Institut Pasteur du Maroc, Morocco
| | - Idris Mhaidi
- Laboratory of Parasitology and Vector-Borne-Diseases, Institut Pasteur du Maroc, Casablanca, Morocco; Molecular Genetics and Immunophysiopathology research team, Health and Environment Laboratory, Hassan II University of Casablanca, Aïn Chock Faculty of Sciences, Morocco
| | - Rajaa Ejghal
- Laboratory of Parasitology and Vector-Borne-Diseases, Institut Pasteur du Maroc, Casablanca, Morocco
| | - Mourad Barhoumi
- Molecular Epidemiology and Experimental Pathology (MEEP)/ LR16IPT04, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunisia
| | - Ikram Guizani
- Molecular Epidemiology and Experimental Pathology (MEEP)/ LR16IPT04, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunisia
| | - Houda Bennani
- Laboratory of Biology and Health, Faculty of Sciences Ben M'Sik, Hassan II University, Casablanca, Morocco
| | - Meryem Lemrani
- Laboratory of Parasitology and Vector-Borne-Diseases, Institut Pasteur du Maroc, Casablanca, Morocco.
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