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Javidanbardan A, Messerian KO, Zydney AL. Membrane technology for the purification of RNA and DNA therapeutics. Trends Biotechnol 2024; 42:714-727. [PMID: 38212210 DOI: 10.1016/j.tibtech.2023.11.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 11/29/2023] [Accepted: 11/30/2023] [Indexed: 01/13/2024]
Abstract
Nucleic acid therapeutics have the potential to revolutionize the biopharmaceutical industry, providing highly effective vaccines and novel treatments for cancers and genetic disorders. The successful commercialization of these therapeutics will require development of manufacturing strategies specifically tailored to the purification of nucleic acids. Membrane technologies already play a critical role in the downstream processing of nucleic acid therapeutics, ranging from clarification to concentration to selective purification. This review provides an overview of how membrane systems are currently used for nucleic acid purification, while highlighting areas of future need and opportunity, including adoption of membranes in continuous bioprocessing.
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Affiliation(s)
- Amin Javidanbardan
- Department of Chemical Engineering, The Pennsylvania State University, University Park, PA 16802, USA
| | - Kevork Oliver Messerian
- Department of Chemical Engineering, The Pennsylvania State University, University Park, PA 16802, USA
| | - Andrew L Zydney
- Department of Chemical Engineering, The Pennsylvania State University, University Park, PA 16802, USA.
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Agrawal P, Wilkstein K, Guinn E, Mason M, Serrano Martinez CI, Saylae J. A Review of Tangential Flow Filtration: Process Development and Applications in the Pharmaceutical Industry. Org Process Res Dev 2023. [DOI: 10.1021/acs.oprd.2c00291] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/03/2023]
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Katagiri N, Shimokawa D, Suzuki T, Kousai M, Iritani E. Separation Properties of Plasmid DNA Using a Two-Stage Particle Adsorption-Microfiltration Process. MEMBRANES 2023; 13:168. [PMID: 36837671 PMCID: PMC9960540 DOI: 10.3390/membranes13020168] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Revised: 01/27/2023] [Accepted: 01/27/2023] [Indexed: 06/18/2023]
Abstract
Plasmid DNA is used as a vector for gene therapy and DNA vaccination; therefore, the establishment of a mass production method is required. Membrane filtration is widely employed as a separation method suitable for the mass production of plasmid DNA. Furthermore, the separation of plasmid DNA using microfiltration and ultrafiltration membranes is being investigated. Because plasmid DNA has a circular structure, it undergoes significant deformation during filtration and easily permeates the membrane, hindering the selection of separation membranes based on molecular weight. In this study, we applied affinity microfiltration to plasmid DNA purification. α-Fe2O3 with an isoelectric point of approximately 8 and a particle size of 0.5 μm was selected as the ligand for two-stage affinity microfiltration of plasmid DNA. In the first stage of microfiltration, the experiment was conducted at a pH of 5, and a cake of α-Fe2O3 with bound plasmid DNA was obtained. Next, liquid permeation (pH 9 and 10) through the cake was performed to elute the bound plasmid DNA. Plasmid DNA was eluted during the early phase of liquid permeation at pH 10. Furthermore, agarose gel analysis confirmed the usefulness of the two-stage affinity microfiltration method with adsorption and desorption for plasmid DNA purification.
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Affiliation(s)
- Nobuyuki Katagiri
- Department of Environmental Technology, Meijo University, 1-501 Shiogamaguchi, Tempaku-ku, Nagoya 468-8502, Japan
| | - Daisuke Shimokawa
- Department of Chemical Engineering, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8603, Japan
| | - Takayuki Suzuki
- Department of Chemical Engineering, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8603, Japan
| | - Masahito Kousai
- Department of Chemical Engineering, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8603, Japan
| | - Eiji Iritani
- Department of Chemical Engineering, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8603, Japan
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Pereira P, Queiroz JA, Figueiras A, Sousa F. Current progress on microRNAs-based therapeutics in neurodegenerative diseases. WILEY INTERDISCIPLINARY REVIEWS-RNA 2016; 8. [PMID: 27882692 DOI: 10.1002/wrna.1409] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2016] [Revised: 10/07/2016] [Accepted: 10/17/2016] [Indexed: 12/17/2022]
Abstract
MicroRNAs (miRNAs)-based therapy has recently emerged as a promising strategy in the treatments of neurodegenerative diseases. Thus, in this review, the most recent and important challenges and advances on the development of miRNA therapeutics for brain targeting are discussed. In particular, this review highlights current knowledge and progress in the field of manufacturing, recovery, isolation, purification, and analysis of these therapeutic oligonucleotides. Finally, the available miRNA delivery systems are reviewed and an analysis is presented in what concerns to the current challenges that have to be addressed to ensure their specificity and efficacy. Overall, it is intended to provide a perspective on the future of miRNA-based therapeutics, focusing the biotechnological approach to obtain miRNAs. WIREs RNA 2017, 8:e1409. doi: 10.1002/wrna.1409 For further resources related to this article, please visit the WIREs website.
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Affiliation(s)
- Patrícia Pereira
- CICS-UBI - Health Sciences Research Centre, Universidade da Beira Interior, Covilhã, Portugal
| | - João A Queiroz
- CICS-UBI - Health Sciences Research Centre, Universidade da Beira Interior, Covilhã, Portugal
| | - Ana Figueiras
- CICS-UBI - Health Sciences Research Centre, Universidade da Beira Interior, Covilhã, Portugal.,REQUIMTE/LAQV, Group of Pharmaceutical Technology, Faculty of Pharmacy, Universidade de Coimbra, Coimbra, Portugal
| | - Fani Sousa
- CICS-UBI - Health Sciences Research Centre, Universidade da Beira Interior, Covilhã, Portugal
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Borujeni EE, Li Y, Zydney AL. Application of periodic backpulsing to reduce membrane fouling during ultrafiltration of plasmid DNA. J Memb Sci 2015. [DOI: 10.1016/j.memsci.2014.08.059] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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Castilho PH, Correia TR, Pessoa de Amorim MT, Escobar IC, Queiroz JA, Correia IJ, Morão AM. Modification of microfiltration membranes by hydrogel impregnation for pDNA purification. J Appl Polym Sci 2014. [DOI: 10.1002/app.41610] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- Pedro H. Castilho
- CICS-UBI; Health Sciences Research Centre, Faculty of Health Sciences, University of Beira Interior; Covilhã Portugal
| | - Tiago R. Correia
- CICS-UBI; Health Sciences Research Centre, Faculty of Health Sciences, University of Beira Interior; Covilhã Portugal
| | | | - Isabel C. Escobar
- Department of Chemical and Environmental Engineering; University of Toledo; Toledo Ohio 43606
| | - João A. Queiroz
- CICS-UBI; Health Sciences Research Centre, Faculty of Health Sciences, University of Beira Interior; Covilhã Portugal
| | - Ilídio J. Correia
- CICS-UBI; Health Sciences Research Centre, Faculty of Health Sciences, University of Beira Interior; Covilhã Portugal
| | - António M. Morão
- CICS-UBI; Health Sciences Research Centre, Faculty of Health Sciences, University of Beira Interior; Covilhã Portugal
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9
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Plasmid DNA purification by integrating membrane technology with arginine affinity chromatography. N Biotechnol 2014. [DOI: 10.1016/j.nbt.2014.05.1904] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Nunes C, Sousa Â, Nunes JC, Morão AM, Sousa F, Queiroz JA. Supercoiled plasmid DNA purification by integrating membrane technology with a monolithic chromatography. J Sep Sci 2014; 37:1229-36. [DOI: 10.1002/jssc.201301160] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2013] [Revised: 03/05/2014] [Accepted: 03/05/2014] [Indexed: 11/08/2022]
Affiliation(s)
- Catherine Nunes
- CICS-UBI-Centro de Investigação em Ciências da Saúde; Universidade da Beira Interior; Covilhã Portugal
| | - Ângela Sousa
- CICS-UBI-Centro de Investigação em Ciências da Saúde; Universidade da Beira Interior; Covilhã Portugal
| | - José C. Nunes
- CICS-UBI-Centro de Investigação em Ciências da Saúde; Universidade da Beira Interior; Covilhã Portugal
| | - António M. Morão
- CICS-UBI-Centro de Investigação em Ciências da Saúde; Universidade da Beira Interior; Covilhã Portugal
| | - Fani Sousa
- CICS-UBI-Centro de Investigação em Ciências da Saúde; Universidade da Beira Interior; Covilhã Portugal
| | - João A. Queiroz
- CICS-UBI-Centro de Investigação em Ciências da Saúde; Universidade da Beira Interior; Covilhã Portugal
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Caramelo-Nunes C, Almeida P, Marcos J, Tomaz C. Aromatic ligands for plasmid deoxyribonucleic acid chromatographic analysis and purification: An overview. J Chromatogr A 2014; 1327:1-13. [DOI: 10.1016/j.chroma.2013.12.057] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2013] [Revised: 12/19/2013] [Accepted: 12/20/2013] [Indexed: 12/25/2022]
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Correia TR, Antunes BP, Castilho PH, Nunes JC, Pessoa de Amorim MT, Escobar IC, Queiroz JA, Correia IJ, Morão AM. A bi-layer electrospun nanofiber membrane for plasmid DNA recovery from fermentation broths. Sep Purif Technol 2013. [DOI: 10.1016/j.seppur.2013.03.049] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
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