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Vañó MS, Nourimand M, MacLean A, Pérez-López E. Getting to the root of a club - Understanding developmental manipulation by the clubroot pathogen. Semin Cell Dev Biol 2023; 148-149:22-32. [PMID: 36792438 DOI: 10.1016/j.semcdb.2023.02.005] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2022] [Revised: 02/06/2023] [Accepted: 02/08/2023] [Indexed: 02/16/2023]
Abstract
Plasmodiophora brassicae Wor., the clubroot pathogen, is the perfect example of an "atypical" plant pathogen. This soil-borne protist and obligate biotrophic parasite infects the roots of cruciferous crops, inducing galls or clubs that lead to wilting, loss of productivity, and plant death. Unlike many other agriculturally relevant pathosystems, research into the molecular mechanisms that underlie clubroot disease and Plasmodiophora-host interactions is limited. After release of the first P. brassicae genome sequence and subsequent availability of transcriptomic data, the clubroot research community have implicated the involvement of phytohormones during the clubroot pathogen's manipulation of host development. Herein we review the main events leading to the formation of root galls and describe how modulation of select phytohormones may be key to modulating development of the plant host to the benefit of the pathogen. Effector-host interactions are at the base of different strategies employed by pathogens to hijack plant cellular processes. This is how we suspect the clubroot pathogen hijacks host plant metabolism and development to induce nutrient-sink roots galls, emphasizing a need to deepen our understanding of this master manipulator.
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Affiliation(s)
- Marina Silvestre Vañó
- Départment de phytologie, Faculté des sciences de l'agriculture et de l'alimentation, Université Laval, Quebec City, Quebec, Canada; Centre de recherche et d'innovation sur les végétaux (CRIV), Université Laval, Quebec City, Quebec, Canada; Institute de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Quebec City, Quebec, Canada
| | - Maryam Nourimand
- Department of Biology, University of Ottawa, Ottawa, ON K1N 6N5, Canada
| | - Allyson MacLean
- Department of Biology, University of Ottawa, Ottawa, ON K1N 6N5, Canada.
| | - Edel Pérez-López
- Départment de phytologie, Faculté des sciences de l'agriculture et de l'alimentation, Université Laval, Quebec City, Quebec, Canada; Centre de recherche et d'innovation sur les végétaux (CRIV), Université Laval, Quebec City, Quebec, Canada; Institute de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Quebec City, Quebec, Canada.
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Jia M, Gong X, Fan M, Liu H, Zhou H, Gu S, Liu Y, Dong J. Identification and analysis of the secretome of plant pathogenic fungi reveals lifestyle adaptation. Front Microbiol 2023; 14:1171618. [PMID: 37152749 PMCID: PMC10156984 DOI: 10.3389/fmicb.2023.1171618] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2023] [Accepted: 03/29/2023] [Indexed: 05/09/2023] Open
Abstract
The secretory proteome plays an important role in the pathogenesis of phytopathogenic fungi. However, the relationship between the large-scale secretome of phytopathogenic fungi and their lifestyle is not fully understood. In the present study, the secretomes of 150 plant pathogenic fungi were predicted and the characteristics associated with different lifestyles were investigated. In total, 94,974 secreted proteins (SPs) were predicted from these fungi. The number of the SPs ranged from 64 to 1,662. Among these fungi, hemibiotrophic fungi had the highest number (average of 970) and proportion (7.1%) of SPs. Functional annotation showed that hemibiotrophic and necrotroph fungi, differ from biotrophic and symbiotic fungi, contained much more carbohydrate enzymes, especially polysaccharide lyases and carbohydrate esterases. Furthermore, the core and lifestyle-specific SPs orthogroups were identified. Twenty-seven core orthogroups contained 16% of the total SPs and their motif function annotation was represented by serine carboxypeptidase, carboxylesterase and asparaginase. In contrast, 97 lifestyle-specific orthogroups contained only 1% of the total SPs, with diverse functions such as PAN_AP in hemibiotroph-specific and flavin monooxygenases in necrotroph-specific. Moreover, obligate biotrophic fungi had the largest number of effectors (average of 150), followed by hemibiotrophic fungi (average of 120). Among these effectors, 4,155 had known functional annotation and pectin lyase had the highest proportion in the functionally annotated effectors. In addition, 32 sets of RNA-Seq data on pathogen-host interactions were collected and the expression levels of SPs were higher than that of non-SPs, and the expression level of effector genes was higher in biotrophic and hemibiotrophic fungi than in necrotrophic fungi, while secretase genes were highly expressed in necrotrophic fungi. Finally, the secretory activity of five predicted SPs from Setosphearia turcica was experimentally verified. In conclusion, our results provide a foundation for the study of pathogen-host interaction and help us to understand the fungal lifestyle adaptation.
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Affiliation(s)
- Mingxuan Jia
- State Key Laboratory of North China Crop Improvement and Regulation, Baoding, China
- College of Life Sciences, Hebei Agricultural University, Baoding, China
| | - Xiaodong Gong
- State Key Laboratory of North China Crop Improvement and Regulation, Baoding, China
- College of Life Sciences, Hebei Agricultural University, Baoding, China
- Hebei Bioinformatic Utilization and Technological Innovation Center for Agricultural Microbes, Baoding, China
| | - Mengmeng Fan
- State Key Laboratory of North China Crop Improvement and Regulation, Baoding, China
- College of Life Sciences, Hebei Agricultural University, Baoding, China
| | - Haoran Liu
- State Key Laboratory of North China Crop Improvement and Regulation, Baoding, China
- College of Life Sciences, Hebei Agricultural University, Baoding, China
| | - He Zhou
- State Key Laboratory of North China Crop Improvement and Regulation, Baoding, China
- College of Life Sciences, Hebei Agricultural University, Baoding, China
| | - Shouqin Gu
- State Key Laboratory of North China Crop Improvement and Regulation, Baoding, China
- College of Life Sciences, Hebei Agricultural University, Baoding, China
- Hebei Bioinformatic Utilization and Technological Innovation Center for Agricultural Microbes, Baoding, China
- *Correspondence: Shouqin Gu, ; Yuwei Liu, ; Jingao Dong,
| | - Yuwei Liu
- State Key Laboratory of North China Crop Improvement and Regulation, Baoding, China
- College of Life Sciences, Hebei Agricultural University, Baoding, China
- Hebei Bioinformatic Utilization and Technological Innovation Center for Agricultural Microbes, Baoding, China
- *Correspondence: Shouqin Gu, ; Yuwei Liu, ; Jingao Dong,
| | - Jingao Dong
- State Key Laboratory of North China Crop Improvement and Regulation, Baoding, China
- College of Plant Protection, Hebei Agricultural University, Baoding, China
- *Correspondence: Shouqin Gu, ; Yuwei Liu, ; Jingao Dong,
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Li X, He Q, Liu Y, Xu X, Xie Q, Li Z, Lin C, Liu W, Chen D, Li X, Miao W. Ectopic Expression of HbRPW8-a from Hevea brasiliensis Improves Arabidopsis thaliana Resistance to Powdery Mildew Fungi (Erysiphe cichoracearum UCSC1). Int J Mol Sci 2022; 23:ijms232012588. [PMID: 36293447 PMCID: PMC9603905 DOI: 10.3390/ijms232012588] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2022] [Revised: 10/15/2022] [Accepted: 10/18/2022] [Indexed: 11/23/2022] Open
Abstract
The RPW8s (Resistance to Powdery Mildew 8) are atypical broad-spectrum resistance genes that provide resistance to the powdery mildew fungi. Powdery mildew of rubber tree is one of the serious fungal diseases that affect tree growth and latex production. However, the RPW8 homologs in rubber tree and their role of resistance to powdery mildew remain unclear. In this study, four RPW8 genes, HbRPW8-a, b, c, d, were identified in rubber tree, and phylogenetic analysis showed that HbRPW8-a was clustered with AtRPW8.1 and AtRPW8.2 of Arabidopsis. The HbRPW8-a protein was localized on the plasma membrane and its expression in rubber tree was significantly induced upon powdery mildew infection. Transient expression of HbRPW8-a in tobacco leaves induced plant immune responses, including the accumulation of reactive oxygen species and the deposition of callose in plant cells, which was similar to that induced by AtRPW8.2. Consistently, overexpression of HbRPW8-a in Arabidopsis thaliana enhanced plant resistance to Erysiphe cichoracearum UCSC1 and Pseudomonas syringae pv. tomato DC30000 (PstDC3000). Moreover, such HbRPW8-a mediated resistance to powdery mildew was in a salicylic acid (SA) dependent manner. Taken together, we demonstrated a new RPW8 member in rubber tree, HbRPW8-a, which could potentially contribute the resistance to powdery mildew.
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Affiliation(s)
- Xiaoli Li
- School of Plant Protection/Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests, Ministry of Education, Hainan University, Haikou 570228, China
| | - Qiguang He
- Hainan Provincial Key Laboratory of Tropical Crops Cultivation and Physiology, Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou 571101, China
| | - Yuhan Liu
- School of Plant Protection/Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests, Ministry of Education, Hainan University, Haikou 570228, China
| | - Xinze Xu
- School of Plant Protection/Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests, Ministry of Education, Hainan University, Haikou 570228, China
| | - Qingbiao Xie
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Institute of Tropical Crops, Hainan University, Haikou 570228, China
| | - Zhigang Li
- School of Plant Protection/Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests, Ministry of Education, Hainan University, Haikou 570228, China
| | - Chunhua Lin
- School of Plant Protection/Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests, Ministry of Education, Hainan University, Haikou 570228, China
| | - Wenbo Liu
- School of Plant Protection/Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests, Ministry of Education, Hainan University, Haikou 570228, China
| | - Daipeng Chen
- School of Plant Protection/Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests, Ministry of Education, Hainan University, Haikou 570228, China
| | - Xiao Li
- School of Plant Protection/Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests, Ministry of Education, Hainan University, Haikou 570228, China
| | - Weiguo Miao
- School of Plant Protection/Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests, Ministry of Education, Hainan University, Haikou 570228, China
- Correspondence:
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Li X, Liu M, Liu Y, Zhao W, Li S, Liu W, Lin C, Miao W. A putative effector of the rubber-tree powdery mildew fungus has elicitor activity that can trigger plant immunity. PLANTA 2022; 255:33. [PMID: 34997357 DOI: 10.1007/s00425-021-03818-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2021] [Accepted: 12/29/2021] [Indexed: 06/14/2023]
Abstract
A putative powdery mildew effector can elicit defense responses including reactive oxygen species and callose accumulations in model plants Nicotiana benthamiana and Arabidopsis thaliana and host plant Hevea brasiliensis. Powdery mildew fungi cause severe diseases in many agricultural plants, such as the mildew fungus Erysiphe quercicola infecting the rubber tree (Hevea brasiliensis), causing latex yield losses. However, effectors of E. quercicola were rarely functionally characterized. In this study, we identified a highly specific candidate-secreted effector protein, EqCSEP04187, from E. quercicola. This putative effector is expressed at the late stage but not the early stage during infection. The constitutive expression of EqCSEP04187 in model plants Nicotiana benthamiana and Arabidopsis thaliana elicited defense responses, as did transient expression of EqCSEP04187 in protoplasts of H. brasiliensis. Introducing EqCSEP04187 into another H. brasiliensis-associated fungal pathogen, Colletotrichum gloeosporioides, inhibited H. brasiliensis infection, and infection by E. quercicola was decreased in the A. thaliana eds1 mutant expressing EqCSEP04187. Further analysis suggests that these reductions in infection were the consequences of EqCSEP04187 eliciting defense responses. Our study suggests that this putative effector has elicitor activity that can improve plant resistance.
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Affiliation(s)
- Xiao Li
- School of Plant Protection, Hainan University, Haikou, 570228, China
- Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, 570228, China
| | - Mengyao Liu
- School of Plant Protection, Hainan University, Haikou, 570228, China
- Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, 570228, China
| | - Yuhan Liu
- School of Plant Protection, Hainan University, Haikou, 570228, China
- Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, 570228, China
| | - Wenyuan Zhao
- School of Plant Protection, Hainan University, Haikou, 570228, China
- Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, 570228, China
| | - Sipeng Li
- School of Plant Protection, Hainan University, Haikou, 570228, China
- Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, 570228, China
| | - Wenbo Liu
- School of Plant Protection, Hainan University, Haikou, 570228, China
- Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, 570228, China
| | - Chunhua Lin
- School of Plant Protection, Hainan University, Haikou, 570228, China
- Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, 570228, China
| | - Weiguo Miao
- School of Plant Protection, Hainan University, Haikou, 570228, China.
- Key Laboratory of Green Prevention and Control of Tropical Plant Diseases and Pests (Hainan University), Ministry of Education, Haikou, 570228, China.
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