1
|
Jeong K, Kim H, Min S, Yoon YW, Cho Y, Park CH, Ryu TI, Hwang SR, Namgoong SK. DFT-Spectroscopy Integrated Identification Method on Unknown Terrorist Chemical Mixtures by Incorporating Experimental and Theoretical GC-MS, NMR, IR, and DFT-NMR/IR Data. Anal Chem 2024; 96:694-700. [PMID: 38153912 DOI: 10.1021/acs.analchem.3c03647] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2023]
Abstract
In the event of a chemical attack, the rapid identification of unknown chemical agents is critical for an effective emergency response and treatment of victims. However, identifying unknown compounds is difficult, particularly when relying on traditional methods such as gas and liquid chromatography-mass spectrometry (GC-MS, LC-MS). In this study, we developed a density functional theory and spectroscopy integrated identification method (D-SIIM) for the possible detection of unknown or unidentified terrorist materials, specifically chemical warfare agents (CWAs). The D-SIIM uses a combination of GC-MS, nuclear magnetic resonance (NMR) spectroscopy, infrared (IR) spectroscopy, and quantum chemical calculation-based NMR/IR predictions to identify potential CWA candidates based on their chemical signatures. Using D-SIIM, we successfully verified the presence of blister and nerve agent simulants in samples by excluding other compounds (ethyl propyl sulfide and methylphosphonic acid), which were predicted to be candidates with high probability by GC-MS. The findings of this study demonstrate that the D-SIIM can detect substances that are likely present in CWA mixtures and can be used to identify unknown terrorist chemicals.
Collapse
Affiliation(s)
- Keunhong Jeong
- Department of Physics and Chemistry, Korea Military Academy, Seoul 01805, South Korea
| | - Honghyun Kim
- Department of Civil Engineering and Environmental Sciences, Korea Military Academy, Seoul 01805, South Korea
| | - Sein Min
- Department of Chemistry, Seoul Women's University, Seoul 01797, South Korea
| | - Young Wook Yoon
- Department of Chemistry, Seoul Women's University, Seoul 01797, South Korea
| | - Yoonjae Cho
- Accident Coordination and Training Division, National Institute of Chemical Safety, 90 Gajeongbuk-ro, Yuseong-gu, Daejeon 34114, South Korea
| | - Choon Hwa Park
- Accident Coordination and Training Division, National Institute of Chemical Safety, 90 Gajeongbuk-ro, Yuseong-gu, Daejeon 34114, South Korea
| | - Tae In Ryu
- Accident Coordination and Training Division, National Institute of Chemical Safety, 90 Gajeongbuk-ro, Yuseong-gu, Daejeon 34114, South Korea
| | - Seung-Ryul Hwang
- Accident Coordination and Training Division, National Institute of Chemical Safety, 90 Gajeongbuk-ro, Yuseong-gu, Daejeon 34114, South Korea
| | - Sung Keon Namgoong
- Department of Chemistry, Seoul Women's University, Seoul 01797, South Korea
| |
Collapse
|
2
|
Ahmad MAB, Lee LC, Mohd Rosdi NAN, Abd Hamid NB, Ishak AA, Sino H. Comparing baseline correction algorithms in discriminating brownish soils from five proximity locations based on UPLC and PLS-DA methods. Forensic Sci Res 2023; 8:313-320. [PMID: 38405627 PMCID: PMC10894064 DOI: 10.1093/fsr/owad045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 09/26/2023] [Indexed: 02/27/2024] Open
Abstract
Soil is commonly collected from an outdoor crime scene, and thus it is helpful in linking a suspect and a victim to a crime scene. The chemical profiles of soils can be acquired via chemical instruments such as Ultra-Performance Liquid Chromatography (UPLC). However, the UPLC chromatogram often interferes with an unstable baseline. In this paper, we compared the performance of five baseline correction (BC) algorithms, i.e. asymmetric least squares (AsLS), fill peak, iterative restricted least squares, median window (MW), and modified polynomial fitting, in discriminating 30 chromatograms of brownish soils by five locations of origin, i.e. PP, HK, KU, BL, and KB. The performances of the preprocessed sub-datasets were first visually inspected through the mean chromatograms and then further explored via scores plots of principal component analysis (PCA). Eventually, the predictive performances of the partial least squares-discriminant analysis (PLS-DA) models estimated from 1 000 pairs of training and testing samples (i.e. prepared via iterative random resampling split at 75:25) were studied to identify the best BC method. Mean raw chromatograms of the 10 soil samples were different from each other, with evident fluctuated baselines. AsLS and MW corrected chromatograms demonstrated the most significant improvement compared with the raw counterpart. Meanwhile, the scores plot of PCA revealed that most of the sub-datasets produced three separate clusters. Then, the sub-datasets were modelled via the PLS-DA technique. MW emerged as the excellent BC method based on the mean prediction accuracy estimated using 1 000 pairs of training and testing samples. In conclusion, MW outperformed the other BC methods in correcting the UPLC data of soil. Key points UPLC data of soil interfere with baseline drifts.BC can improve the quality of the pixel-level UPLC data.MW emerges as the most desired algorithm in improving the quality of UPLC data of soil.
Collapse
Affiliation(s)
- Muhamad Adib bin Ahmad
- Forensic Science Program, CODTIS, Faculty of Health Sciences, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| | - Loong Chuen Lee
- Forensic Science Program, CODTIS, Faculty of Health Sciences, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
- Institute of IR 4.0, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| | - Nur Ain Najihah Mohd Rosdi
- Forensic Science Program, CODTIS, Faculty of Health Sciences, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| | - Nadirah Binti Abd Hamid
- Forensic Science Program, CODTIS, Faculty of Health Sciences, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| | - Ab Aziz Ishak
- Forensic Science Program, CODTIS, Faculty of Health Sciences, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| | - Hukil Sino
- Forensic Science Program, CODTIS, Faculty of Health Sciences, Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia
| |
Collapse
|
3
|
Maidodou L, Clarot I, Leemans M, Fromantin I, Marchioni E, Steyer D. Unraveling the potential of breath and sweat VOC capture devices for human disease detection: a systematic-like review of canine olfaction and GC-MS analysis. Front Chem 2023; 11:1282450. [PMID: 38025078 PMCID: PMC10646374 DOI: 10.3389/fchem.2023.1282450] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Accepted: 10/16/2023] [Indexed: 12/01/2023] Open
Abstract
The development of disease screening methods using biomedical detection dogs relies on the collection and analysis of body odors, particularly volatile organic compounds (VOCs) present in body fluids. To capture and analyze odors produced by the human body, numerous protocols and materials are used in forensics or medical studies. This paper provides an overview of sampling devices used to collect VOCs from sweat and exhaled air, for medical diagnostic purposes using canine olfaction and/or Gas Chromatography-Mass spectrometry (GC-MS). Canine olfaction and GC-MS are regarded as complementary tools, holding immense promise for detecting cancers and infectious diseases. However, existing literature lacks guidelines for selecting materials suitable for both canine olfaction and GC-MS. Hence, this review aims to address this gap and pave the way for efficient body odor sampling materials. The first section of the paper describes the materials utilized in training sniffing dogs, while the second section delves into the details of sampling devices and extraction techniques employed for exhaled air and sweat analysis using GC-MS. Finally, the paper proposes the development of an ideal sampling device tailored for detection purposes in the field of odorology. By bridging the knowledge gap, this study seeks to advance disease detection methodologies, harnessing the unique abilities of both dogs and GC-MS analysis in biomedical research.
Collapse
Affiliation(s)
- Laetitia Maidodou
- Twistaroma, Illkirch Graffenstaden, France
- CITHEFOR, EA 3452, Université de Lorraine, Nancy, France
- DSA, IPHC UMR7178, Université de Strasbourg, Strasbourg, France
| | - Igor Clarot
- CITHEFOR, EA 3452, Université de Lorraine, Nancy, France
| | - Michelle Leemans
- Clinical Epidemiology and Ageing, IMRB—Paris Est Créteil University /Inserm U955, Créteil, France
| | - Isabelle Fromantin
- Clinical Epidemiology and Ageing, IMRB—Paris Est Créteil University /Inserm U955, Créteil, France
- Wound Care and Research Unit, Curie Institute, Paris, France
| | - Eric Marchioni
- DSA, IPHC UMR7178, Université de Strasbourg, Strasbourg, France
| | | |
Collapse
|
4
|
Mohd Rosdi NANB, Abd Hamid N, Mohd Ali SF, Sino H, Lee LC. A Critical Review of Soil Sampling and Data Analysis Strategies for Source Tracing of Soil in Forensic Investigations. Crit Rev Anal Chem 2023; 54:3520-3558. [PMID: 37672265 DOI: 10.1080/10408347.2023.2253473] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/07/2023]
Abstract
Soil is one type of Earth material demonstrating a wide range of physical, chemical, and biological properties. As the compositional profile of soil is a product of interaction between numerous abiotic and biotic components, it tends to be unique by its geographic origin. Hence, soil is paramount for predicting source or origin in forensic provenance and intelligence, food provenance, biosecurity, and archaeology. In the context of forensic investigation, source tracing of soil could be executed by a comparison or provenance analysis. Soil compositional fingerprints acquired using analytical methods must be carefully interpreted via suitable mathematical and statistical tools since multiple sources can contribute to the variability of soil other than its provenance. This article reviews recent trends in soil sampling and data interpretation strategies proposed for source tracing of soil evidence. Performances of soil provenance indicators are also described. Then, perspectives on possible research directions guiding forensic soil provenance are proposed. This timely critical review reveals the essential idea and gap in forensic soil provenance for stimulating the development of more efficient and effective provenance strategies.
Collapse
Affiliation(s)
| | - Nadirah Abd Hamid
- Forensic Science Program, CODTIS, Faculty of Health Sciences, Universiti Kebangsaan Malaysia, Malaysia
| | | | - Hukil Sino
- Forensic Science Program, CODTIS, Faculty of Health Sciences, Universiti Kebangsaan Malaysia, Malaysia
| | - Loong Chuen Lee
- Forensic Science Program, CODTIS, Faculty of Health Sciences, Universiti Kebangsaan Malaysia, Malaysia
| |
Collapse
|
5
|
Md Ghazi MGB, Chuen Lee L, Samsudin AS, Sino H. Comparison of decision tree and naïve Bayes algorithms in detecting trace residue of gasoline based on gas chromatography-mass spectrometry data. Forensic Sci Res 2023; 8:249-255. [PMID: 38221967 PMCID: PMC10785596 DOI: 10.1093/fsr/owad031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Accepted: 03/16/2023] [Indexed: 01/16/2024] Open
Abstract
Fire debris analysis aims to detect and identify any ignitable liquid residues in burnt residues collected at a fire scene. Typically, the burnt residues are analysed using gas chromatography-mass spectrometry (GC-MS) and are manually interpreted. The interpretation process can be laborious due to the complexity and high dimensionality of the GC-MS data. Therefore, this study aims to compare the potential of classification and regression tree (CART) and naïve Bayes (NB) algorithms in analysing the pixel-level GC-MS data of fire debris. The data comprise 14 positive (i.e. fire debris with traces of gasoline) and 24 negative (i.e. fire debris without traces of gasoline) samples. The differences between the positive and negative samples were first inspected based on the mean chromatograms and scores plots of the principal component analysis technique. Then, CART and NB algorithms were independently applied to the GC-MS data. Stratified random resampling was applied to prepare three sets of 200 pairs of training and testing samples (i.e. split ratio of 7:3, 8:2, and 9:1) for estimating the prediction accuracies. Although both the positive and negative samples were hardly differentiated based on the mean chromatograms and scores plots of principal component analysis, the respective NB and CART predictive models produced satisfactory performances with the normalized GC-MS data, i.e. majority achieved prediction accuracy >70%. NB consistently outperformed CART based on the prediction accuracies of testing samples and the corresponding risk of overfitting except when evaluated using only 10% of samples. The accuracy of CART was found to be inversely proportional to the number of testing samples; meanwhile, NB demonstrated rather consistent performances across the three split ratios. In conclusion, NB seems to be much better than CART based on the robustness against the number of testing samples and the consistent lower risk of overfitting.
Collapse
Affiliation(s)
- Md Gezani Bin Md Ghazi
- Forensic Science Program, CODTIS, Faculty of Health Science, Universiti Kebangsaan Malaysia, Selangor, Malaysia
- Fire Investigation Division, Fire and Rescue Department of Malaysia, Putrajaya, Malaysia
| | - Loong Chuen Lee
- Forensic Science Program, CODTIS, Faculty of Health Science, Universiti Kebangsaan Malaysia, Selangor, Malaysia
- Institute of IR 4.0, Universiti Kebangsaan Malaysia, Selangor, Malaysia
| | - Aznor S Samsudin
- Fire Investigation Laboratory, Fire Investigation Division, Fire and Rescue Department of Selangor, Selangor, Malaysia
| | - Hukil Sino
- Forensic Science Program, CODTIS, Faculty of Health Science, Universiti Kebangsaan Malaysia, Selangor, Malaysia
| |
Collapse
|
6
|
Md Ghazi MGB, Lee LC, Samsudin ASB, Sino H. Evaluation of ensemble data preprocessing strategy on forensic gasoline classification using untargeted GC–MS data and classification and regression tree (CART) algorithm. Microchem J 2022. [DOI: 10.1016/j.microc.2022.107911] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|