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Wang W, Yi J, Zhan J, Luo D, Chen Q, Yu S, Xie L, Chen K. Comparative Genomic Analysis of an Apiotrichum cacaoliposimilis Strain Isolated from a Patient with Urinary Tract Infection. Pol J Microbiol 2024; 73:475-489. [PMID: 39670642 PMCID: PMC11639406 DOI: 10.33073/pjm-2024-038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2024] [Accepted: 09/12/2024] [Indexed: 12/14/2024] Open
Abstract
Opportunistic infections caused by fungi, particularly those occurring in immunocompromised patients, are considered challenging worldwide. Therefore, a comprehensive understanding of pathogenic fungi is necessary. The present study reports the isolation of a strain of Apiotrichum cacaoliposimilis, which is difficult to detect using conventional clinical assays, from the sterile urine samples of a patient with a urinary tract infection. Sanger sequencing of the internal transcribed spacer regions confirmed the genus of the microbe, while whole-genome sequencing yielded the initial genome assembly of A. cacaoliposimilis. A total of 7,161 predicted proteincoding genes were mapped using multiple databases, including Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, non-redundant protein database, Pathogen-Host Interactions Database, and Comprehensive Antibiotic Resistance Database. The phenotypic data, biochemical reactions, and antimicrobial susceptibility analyses were conducted to reveal the metabolic properties, virulence, and drug resistance profile of the isolated A. cacaoliposimilis. The rank-sum test revealed the differences in the intergeneric distribution of the highly virulent genes UgeB and Pem2. In addition, other genes exhibited significant overlap in terms of virulence factors with the clinical isolate Apiotrichum mycotoxinivorans GMU1709. Fortunately, similar to most fungi belonging to the Apiotrichum genus, the isolate investigated in the present study was also sensitive to the drug voriconazole (MIC = 0.06 μg/ml). In summary, the phylogenetic placement, potential pathogenic genes, drug sensitivity patterns, and morphological characteristics of the isolated A. cacaoliposimilis were determined precisely in the present study.
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Affiliation(s)
- Wei Wang
- Department of Clinical Laboratory, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China
- Department of Public Health, Jiangxi Medical College, Nanchang University, Nanchang, China
| | - Jinping Yi
- Department of Clinical Laboratory, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China
| | - Jiahuan Zhan
- Department of Clinical Laboratory, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China
- Department of Public Health, Jiangxi Medical College, Nanchang University, Nanchang, China
| | - Dong Luo
- Department of Clinical Laboratory, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China
| | - Qiang Chen
- Department of Clinical Laboratory, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China
| | - Shengming Yu
- Department of Clinical Laboratory, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China
- Department of Public Health, Jiangxi Medical College, Nanchang University, Nanchang, China
| | - Ling Xie
- Department of Clinical Laboratory, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China
- Department of Public Health, Jiangxi Medical College, Nanchang University, Nanchang, China
| | - Kaisen Chen
- Department of Clinical Laboratory, the First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China
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Subramanian A, Sheela devi, Abraham G, Honnavar P. Trichosporon asahii infection associated with glomerulonephritis in a diabetic patient. Med Mycol Case Rep 2022; 35:15-17. [PMID: 35028282 PMCID: PMC8715133 DOI: 10.1016/j.mmcr.2021.12.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Revised: 11/21/2021] [Accepted: 12/04/2021] [Indexed: 11/30/2022] Open
Abstract
Trichosporon colonizes the skin, vagina, gastrointestinal and respiratory tract of humans. Superficial infections are common, while disseminated trichosporonosis is rare, specifically seen among immunocompromised patients and often associated with high mortality. We report a rare case Trichosporon asahii infection in a 78-year-old diabetic, with associated acute interstitial glomerulonephritis. Molecular identification of the isolate was confirmed by sequencing IGS1 region of rDNA. Our study adds to a rather limited literature on renal complications of Trichosporonosis.
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Affiliation(s)
- Anandhalakshmi Subramanian
- Department of Microbiology, College of Medicine, King Khalid University, Abha, Asir region, 61421, Saudi Arabia
| | - Sheela devi
- Department of Microbiology, Pondicherry Institute of Medical Sciences, Puducherry, 605008, India
| | - Georgi Abraham
- Department of General Medicine, Pondicherry Institute of Medical Sciences, Puducherry, 605008, India
| | - Prasanna Honnavar
- American University of Antigua College of Medicine, Antigua and Barbuda
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First case of bloodstream infection of Trichosporon loubieri in a patient with B-cell lymphocytic leukemia in China. J Infect Chemother 2020; 27:86-89. [PMID: 32933860 DOI: 10.1016/j.jiac.2020.08.023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2020] [Revised: 07/13/2020] [Accepted: 08/27/2020] [Indexed: 11/24/2022]
Abstract
Trichosporon loubieri is an opportunistic pathogenic fungus that could causes invasive infections for human, which rarely been reported. In the present study, we reported a case of bloodstream infection from a patient with Ph-positive B-cell acute lymphocytic leukemia (B-ALL) due to Trichosporon loubieri. Trichosporon loubieri was identified by Internal Transcribed Spacer (ITS) gene sequencing. The patient was treated by intravenous voriconazole (VCZ) and amphotericin B (AmB) according to antifungal susceptibility testing and he was still alive so far. To the best of our knowledge, this is the fourth report of human bloodstream infection due to Trichosporon loubieri and the first survival case of its kind in an immunocompromised patient.
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