1
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Özgen FF, Jorea A, Capaldo L, Kourist R, Ravelli D, Schmidt S. The Synthesis of Chiral γ‐Lactones by Merging Decatungstate Photocatalysis with Biocatalysis. ChemCatChem 2022. [DOI: 10.1002/cctc.202200855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Fatma Feyza Özgen
- Rijksuniversiteit Groningen Chemical and Pharmaceutical Biology Antonius Deusinglaan 1 9713AV Groningen NETHERLANDS
| | - Alexandra Jorea
- University of Pavia: Universita degli Studi di Pavia Department of Chemistry viale Taramelli 12 27100 Pavia ITALY
| | - Luca Capaldo
- University of Pavia: Universita degli Studi di Pavia Department of Chemistry viale Taramelli 12 27100 Pavia ITALY
| | - Robert Kourist
- Graz University of Technology: Technische Universitat Graz Institut of Molecular Biotechnology Petersgass 14 8010 Graz AUSTRIA
| | - Davide Ravelli
- University of Pavia: Universita degli Studi di Pavia Department of Chemistry viale Taramelli 12 27100 Pavia ITALY
| | - Sandy Schmidt
- Rijksuniversiteit Groningen Chemical and Pharmaceutical Biology Antonius Deusinglaan 1 9713AV Groningen NETHERLANDS
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2
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Zhang J, Zhou J, Xu G, Ni Y. Stereodivergent evolution of KpADH for the asymmetric reduction of diaryl ketones with para-substituents. MOLECULAR CATALYSIS 2022. [DOI: 10.1016/j.mcat.2022.112315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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3
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Venturi S, Trajkovic M, Colombo D, Brenna E, Fraaije MW, Gatti FG, Macchi P, Zamboni E. Chemoenzymatic Synthesis of the Most Pleasant Stereoisomer of Jessemal. J Org Chem 2022; 87:6499-6503. [PMID: 35442680 PMCID: PMC9087343 DOI: 10.1021/acs.joc.2c00427] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
![]()
We describe the asymmetric
synthesis of the most pleasant enantiomer
of Jessemal fragrance. The key steps are (i) the one-pot reduction
of an α-chloro-tetrasubstituted cyclohexenone to give the chlorohydrin,
catalyzed by two stereoselective redox enzymes (an ene-reductase and
an alcohol dehydrogenase); (ii) the regioselective epoxide ring-opening
with organocuprate or organolithium nucleophiles. Density functional
theory calculations together with the Curtin–Hammett principle
allowed the rationalization of the regioselectivity.
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Affiliation(s)
- Silvia Venturi
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano, P.zza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Milos Trajkovic
- Molecular Enzymology Group, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Danilo Colombo
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano, P.zza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Elisabetta Brenna
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano, P.zza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Marco W Fraaije
- Molecular Enzymology Group, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Francesco G Gatti
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano, P.zza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Piero Macchi
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano, P.zza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Emilio Zamboni
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano, P.zza Leonardo da Vinci 32, 20133 Milano, Italy
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4
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Wang T, Zhang XY, Zheng YC, Bai YP. Stereoselective synthesis of chiral δ-lactones via an engineered carbonyl reductase. Chem Commun (Camb) 2021; 57:10584-10587. [PMID: 34559867 DOI: 10.1039/d1cc04542c] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A carbonyl reductase variant, SmCRM5, from Serratia marcescens was obtained through structure-guided directed evolution. The variant showed improved specific activity (U mg-1) towards most of the 16 tested substrates and gave high stereoselectivities of up to 99% in the asymmetric synthesis of 13 γ-/δ-lactones. In particular, SmCRM5 showed a 13.8-fold higher specific activity towards the model substrate, i.e., 5-oxodecanoic acid, and gave (R)-δ-decalactone in 99% ee with a space-time yield (STY) of 301 g L-1 d-1. The preparative synthesis of six δ-lactones in high yields and with high enantiopurities showed the feasibility of the biocatalytic synthesis of these high-value-added chemicals, providing a cost-effective and green alternative to noble-metal catalysis.
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Affiliation(s)
- Tao Wang
- State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237, China.
| | - Xiao-Yan Zhang
- State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237, China.
| | - Yu-Cong Zheng
- State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237, China.
| | - Yun-Peng Bai
- State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Center for Biomanufacturing, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237, China.
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5
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Parmeggiani F, Brenna E, Colombo D, Gatti FG, Tentori F, Tessaro D. "A Study in Yellow": Investigations in the Stereoselectivity of Ene-Reductases. Chembiochem 2021; 23:e202100445. [PMID: 34586700 PMCID: PMC9292831 DOI: 10.1002/cbic.202100445] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2021] [Revised: 09/28/2021] [Indexed: 12/11/2022]
Abstract
Ene‐reductases from the Old Yellow Enzyme (OYE) superfamily are a well‐known and efficient biocatalytic alternative for the asymmetric reduction of C=C bonds. Considering the broad variety of substituents that can be tolerated, and the excellent stereoselectivities achieved, it is apparent why these enzymes are so appealing for preparative and industrial applications. Different classes of C=C bonds activated by at least one electron‐withdrawing group have been shown to be accepted by these versatile biocatalysts in the last decades, affording a vast range of chiral intermediates employed in the synthesis of pharmaceuticals, agrochemicals, flavours, fragrances and fine chemicals. In order to access both enantiomers of reduced products, stereodivergent pairs of OYEs are desirable, but their natural occurrence is limited. The detailed knowledge of the stereochemical course of the reaction can uncover alternative strategies to orient the selectivity via mutagenesis, evolution, and substrate engineering. An overview of the ongoing studies on OYE‐mediated bioreductions will be provided, with particular focus on stereochemical investigations by deuterium labelling.
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Affiliation(s)
- Fabio Parmeggiani
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "Giulio Natta", Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133, Milano, Italy
| | - Elisabetta Brenna
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "Giulio Natta", Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133, Milano, Italy
| | - Danilo Colombo
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "Giulio Natta", Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133, Milano, Italy
| | - Francesco G Gatti
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "Giulio Natta", Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133, Milano, Italy
| | - Francesca Tentori
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "Giulio Natta", Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133, Milano, Italy
| | - Davide Tessaro
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "Giulio Natta", Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133, Milano, Italy
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6
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Venturi S, Brenna E, Colombo D, Fraaije MW, Gatti FG, Macchi P, Monti D, Trajkovic M, Zamboni E. Multienzymatic Stereoselective Reduction of Tetrasubstituted Cyclic Enones to Halohydrins with Three Contiguous Stereogenic Centers. ACS Catal 2020. [DOI: 10.1021/acscatal.0c04097] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Silvia Venturi
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica ”G. Natta”, Politecnico di Milano, P.zza Leonardo da Vinci 32, Milano 20133, Italy
| | - Elisabetta Brenna
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica ”G. Natta”, Politecnico di Milano, P.zza Leonardo da Vinci 32, Milano 20133, Italy
| | - Danilo Colombo
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica ”G. Natta”, Politecnico di Milano, P.zza Leonardo da Vinci 32, Milano 20133, Italy
| | - Marco W. Fraaije
- Molecular Enzymology Group, University of Groningen, Nijenborgh 4, Groningen 9747 AG, The Netherlands
| | - Francesco G. Gatti
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica ”G. Natta”, Politecnico di Milano, P.zza Leonardo da Vinci 32, Milano 20133, Italy
| | - Piero Macchi
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica ”G. Natta”, Politecnico di Milano, P.zza Leonardo da Vinci 32, Milano 20133, Italy
| | - Daniela Monti
- Istituto di Scienze e Tecnologie Chimiche “Giulio Natta” (SCITEC), C.N.R., Via Mario Bianco, 9, Milano 20131, Italy
| | - Milos Trajkovic
- Molecular Enzymology Group, University of Groningen, Nijenborgh 4, Groningen 9747 AG, The Netherlands
| | - Emilio Zamboni
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica ”G. Natta”, Politecnico di Milano, P.zza Leonardo da Vinci 32, Milano 20133, Italy
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7
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Brewster RC, Suitor JT, Bennett AW, Wallace S. Transition Metal‐Free Reduction of Activated Alkenes Using a Living Microorganism. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201903973] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Richard C. Brewster
- Institute for Quantitative Biology, Biochemistry and BiotechnologySchool of Biological SciencesUniversity of Edinburgh, King's Buildings Alexander Crum Brown Road Edinburgh EH9 3FF UK
| | - Jack T. Suitor
- Institute for Quantitative Biology, Biochemistry and BiotechnologySchool of Biological SciencesUniversity of Edinburgh, King's Buildings Alexander Crum Brown Road Edinburgh EH9 3FF UK
| | - Adam W. Bennett
- School of ChemistryUniversity of EdinburghJoseph Black Building David Brewster Road, King's Buildings Edinburgh EH9 3FJ UK
| | - Stephen Wallace
- Institute for Quantitative Biology, Biochemistry and BiotechnologySchool of Biological SciencesUniversity of Edinburgh, King's Buildings Alexander Crum Brown Road Edinburgh EH9 3FF UK
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8
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Brewster RC, Suitor JT, Bennett AW, Wallace S. Transition Metal-Free Reduction of Activated Alkenes Using a Living Microorganism. Angew Chem Int Ed Engl 2019; 58:12409-12414. [PMID: 31286626 DOI: 10.1002/anie.201903973] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Revised: 06/26/2019] [Indexed: 01/07/2023]
Abstract
Microorganisms can be programmed to perform chemical synthesis via metabolic engineering. However, despite an increasing interest in the use of de novo metabolic pathways and designer whole-cells for small molecule synthesis, the inherent synthetic capabilities of native microorganisms remain underexplored. Herein, we report the use of unmodified E. coli BL21(DE3) cells for the reduction of keto-acrylic compounds and apply this whole-cell biotransformation to the synthesis of aminolevulinic acid from a lignin-derived feedstock. The reduction reaction is rapid, chemo-, and enantioselective, occurs under mild conditions (37 °C, aqueous media), and requires no toxic transition metals or external reductants. This study demonstrates the remarkable promiscuity of central metabolism in bacterial cells and how these processes can be leveraged for synthetic chemistry without the need for genetic manipulation.
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Affiliation(s)
- Richard C Brewster
- Institute for Quantitative Biology, Biochemistry and Biotechnology, School of Biological Sciences, University of Edinburgh, King's Buildings, Alexander Crum Brown Road, Edinburgh, EH9 3FF, UK
| | - Jack T Suitor
- Institute for Quantitative Biology, Biochemistry and Biotechnology, School of Biological Sciences, University of Edinburgh, King's Buildings, Alexander Crum Brown Road, Edinburgh, EH9 3FF, UK
| | - Adam W Bennett
- School of Chemistry, University of Edinburgh, Joseph Black Building, David Brewster Road, King's Buildings, Edinburgh, EH9 3FJ, UK
| | - Stephen Wallace
- Institute for Quantitative Biology, Biochemistry and Biotechnology, School of Biological Sciences, University of Edinburgh, King's Buildings, Alexander Crum Brown Road, Edinburgh, EH9 3FF, UK
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9
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Toogood HS, Scrutton NS. Discovery, Characterisation, Engineering and Applications of Ene Reductases for Industrial Biocatalysis. ACS Catal 2019; 8:3532-3549. [PMID: 31157123 PMCID: PMC6542678 DOI: 10.1021/acscatal.8b00624] [Citation(s) in RCA: 158] [Impact Index Per Article: 31.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Recent studies of multiple enzyme families collectively referred to as ene-reductases (ERs) have highlighted potential industrial application of these biocatalysts in the production of fine and speciality chemicals. Processes have been developed whereby ERs contribute to synthetic routes as isolated enzymes, components of multi-enzyme cascades, and more recently in metabolic engineering and synthetic biology programmes using microbial cell factories to support chemicals production. The discovery of ERs from previously untapped sources and the expansion of directed evolution screening programmes, coupled to deeper mechanistic understanding of ER reactions, have driven their use in natural product and chemicals synthesis. Here we review developments, challenges and opportunities for the use of ERs in fine and speciality chemicals manufacture. The ER research field is rapidly expanding and the focus of this review is on developments that have emerged predominantly over the last 4 years.
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Affiliation(s)
- Helen S. Toogood
- School of Chemistry, Faculty of Science and Engineering, University of Manchester, 131 Princess Street, Manchester M1 7DN, U.K
| | - Nigel S. Scrutton
- School of Chemistry, Faculty of Science and Engineering, University of Manchester, 131 Princess Street, Manchester M1 7DN, U.K
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10
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Brenna E, Dalla Santa F, Gatti FG, Gatti G, Tessaro D. Exploiting the vicinal disubstituent effect on the diastereoselective synthesis of γ and δ lactones. Org Biomol Chem 2019; 17:813-821. [PMID: 30478459 DOI: 10.1039/c8ob02715c] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Trifluoroacetic acid catalysed lactonization of vicinal disubstituted γ-hydroxyesters was investigated in different solvents. The reaction kinetics, monitored by NMR spectroscopy, showed that: (i) the vic-disubstituent effect is stereoselective since the anti diastereoisomer ring closes substantially more rapidly than the syn isomer ring; (ii) the anti-vic effect is much stronger than the classical Thorpe-Ingold effect (known also as the gem-disubstituent effect), instead the syn diastereoisomers have rate constants comparable to that of the gem-disubstituted ester; (iii) the vic-effect can be enhanced by increasing the steric hindrance of one of the two substituents or carrying out the reaction in non-polar solvents. DFT computations of energy barriers (ΔG‡) were in good agreement with the experimental data. The distortion/interaction-activation strain model together with the Winstein-Holness kinetic scheme gave more insights into the origin of the vic-effect. An application of this effect consists of the diastereomeric resolution of disubstituted γ and δ lactones, among which are the naturally occurring Nicotiana t. lactone, the whisky and cognac oak lactones, and the Aerangis lactone. Both cis and trans diastereoisomers of these lactones were isolated in good yield and with high diastereomeric excess (de >92%). The selectivities of the diastereomeric resolution process, determined by NMR spectroscopy, are reported as well.
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Affiliation(s)
- Elisabetta Brenna
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano, P.zza Leonardo da Vinci 32, 20133 Milano, Italy.
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11
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Kumru C, Classen T, Pietruszka J. Enantioselective, Catalytic One‐Pot Synthesis of
γ
‐Butyrolactone‐Based Fragrances. ChemCatChem 2018. [DOI: 10.1002/cctc.201801040] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Ceyda Kumru
- Institut für Bioorganische ChemieHeinrich-Heine-Universität Düsseldorf im Forschungszentrum Jülich, Stetternicher Forst, Geb. 15.8 Jülich 52426 Germany
- Institut für Bio- und Geowissenschaften, (IBG-1: Bioorganic Chemistry), Forschungszentrum Jülich Jülich 52425 Germany
| | - Thomas Classen
- Institut für Bio- und Geowissenschaften, (IBG-1: Bioorganic Chemistry), Forschungszentrum Jülich Jülich 52425 Germany
| | - Jörg Pietruszka
- Institut für Bioorganische ChemieHeinrich-Heine-Universität Düsseldorf im Forschungszentrum Jülich, Stetternicher Forst, Geb. 15.8 Jülich 52426 Germany
- Institut für Bio- und Geowissenschaften, (IBG-1: Bioorganic Chemistry), Forschungszentrum Jülich Jülich 52425 Germany
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12
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Brenna E, Crotti M, De Pieri M, Gatti FG, Manenti G, Monti D. Chemo-Enzymatic Oxidative Rearrangement of Tertiary Allylic Alcohols: Synthetic Application and Integration into a Cascade Process. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201800299] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Elisabetta Brenna
- Dipartimento CMIC “G. Natta”; Politecnico di Milano; Via Mancinelli 20134 Milan IT
- The Protein Factory; Politecnico di Milano Università degli Studi dell' Insubria; Via Mancinelli 7 20131 Milano IT
| | - Michele Crotti
- Dipartimento CMIC “G. Natta”; Politecnico di Milano; Via Mancinelli 20134 Milan IT
| | - Matteo De Pieri
- Dipartimento CMIC “G. Natta”; Politecnico di Milano; Via Mancinelli 20134 Milan IT
| | - Francesco G. Gatti
- Dipartimento CMIC “G. Natta”; Politecnico di Milano; Via Mancinelli 20134 Milan IT
- The Protein Factory; Politecnico di Milano Università degli Studi dell' Insubria; Via Mancinelli 7 20131 Milano IT
| | - Gabriele Manenti
- Dipartimento CMIC “G. Natta”; Politecnico di Milano; Via Mancinelli 20134 Milan IT
| | - Daniela Monti
- Istituto di Chimica del Riconoscimento Molecolare C.N.R.; Via Mario Bianco 9 20131 Milano IT
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13
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In silico and in vitro studies of the reduction of unsaturated α,β bonds of trans-2-hexenedioic acid and 6-amino-trans-2-hexenoic acid - Important steps towards biobased production of adipic acid. PLoS One 2018; 13:e0193503. [PMID: 29474495 PMCID: PMC5825115 DOI: 10.1371/journal.pone.0193503] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2017] [Accepted: 02/12/2018] [Indexed: 01/31/2023] Open
Abstract
The biobased production of adipic acid, a precursor in the production of nylon, is of great interest in order to replace the current petrochemical production route. Glucose-rich lignocellulosic raw materials have high potential to replace the petrochemical raw material. A number of metabolic pathways have been proposed for the microbial conversion of glucose to adipic acid, but achieved yields and titers remain to be improved before industrial applications are feasible. One proposed pathway starts with lysine, an essential metabolite industrially produced from glucose by microorganisms. However, the drawback of this pathway is that several reactions are involved where there is no known efficient enzyme. By changing the order of the enzymatic reactions, we were able to identify an alternative pathway with one unknown enzyme less compared to the original pathway. One of the reactions lacking known enzymes is the reduction of the unsaturated α,β bond of 6-amino-trans-2-hexenoic acid and trans-2-hexenedioic acid. To identify the necessary enzymes, we selected N-ethylmaleimide reductase from Escherichia coli and Old Yellow Enzyme 1 from Saccharomyces pastorianus. Despite successful in silico docking studies, where both target substrates could fit in the enzyme pockets, and hydrogen bonds with catalytic residues of both enzymes were predicted, no in vitro activity was observed. We hypothesize that the lack of activity is due to a difference in electron withdrawing potential between the naturally reduced aldehyde and the carboxylate groups of our target substrates. Suggestions for protein engineering to induce the reactions are discussed, as well as the advantages and disadvantages of the two metabolic pathways from lysine. We have highlighted bottlenecks associated with the lysine pathways, and proposed ways of addressing them.
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14
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Winkler CK, Faber K, Hall M. Biocatalytic reduction of activated CC-bonds and beyond: emerging trends. Curr Opin Chem Biol 2018; 43:97-105. [PMID: 29275291 DOI: 10.1016/j.cbpa.2017.12.003] [Citation(s) in RCA: 84] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2017] [Revised: 11/02/2017] [Accepted: 12/04/2017] [Indexed: 01/01/2023]
Abstract
The biocatalytic reduction of activated CC-bonds is dominated by ene-reductases from the Old Yellow Enzyme family, which gained broad practical use owing to exquisite stereoselectivity combined with wide substrate scope. Protein diversity is fostered by mining distinct protein classes and by implementing protein engineering techniques. Recent efforts are focusing on expanding the chemical complexity of the product portfolio, either through substrate functionalization or design of multi-step reactions. This review also highlights unusual chemistries catalyzed by ene-reductases and presents emerging methodologies developed to bypass the need of natural nicotinamide cofactors.
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Affiliation(s)
| | - Kurt Faber
- Department of Chemistry, University of Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Mélanie Hall
- Department of Chemistry, University of Graz, Heinrichstrasse 28, 8010 Graz, Austria.
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15
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Rossetti A, Sacchetti A, Bonfanti M, Roda G, Rainoldi G, Silvani A. Biocatalysed olefin reduction of 3-alkylidene oxindoles by baker's yeast. Tetrahedron 2017. [DOI: 10.1016/j.tet.2017.06.022] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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16
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Schrittwieser JH, Velikogne S, Hall M, Kroutil W. Artificial Biocatalytic Linear Cascades for Preparation of Organic Molecules. Chem Rev 2017; 118:270-348. [DOI: 10.1021/acs.chemrev.7b00033] [Citation(s) in RCA: 371] [Impact Index Per Article: 53.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Joerg H. Schrittwieser
- Institute
of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Stefan Velikogne
- ACIB
GmbH, Department of Chemistry, University of Graz, Heinrichstrasse
28, 8010 Graz, Austria
| | - Mélanie Hall
- Institute
of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Wolfgang Kroutil
- Institute
of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, Heinrichstrasse 28, 8010 Graz, Austria
- ACIB
GmbH, Department of Chemistry, University of Graz, Heinrichstrasse
28, 8010 Graz, Austria
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17
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Nett N, Duewel S, Richter AA, Hoebenreich S. Revealing Additional Stereocomplementary Pairs of Old Yellow Enzymes by Rational Transfer of Engineered Residues. Chembiochem 2017; 18:685-691. [PMID: 28107586 DOI: 10.1002/cbic.201600688] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2016] [Indexed: 01/01/2023]
Abstract
Every year numerous protein engineering and directed evolution studies are published, increasing the knowledge that could be used by protein engineers. Here we test a protein engineering strategy that allows quick access to improved biocatalysts with very little screening effort. Conceptually it is assumed that engineered residues previously identified by rational and random methods induce similar improvements when transferred to family members. In an application to ene-reductases from the Old Yellow Enzyme (OYE) family, the newly created variants were tested with three compounds, revealing more stereocomplementary OYE pairs with potent turnover frequencies (up to 660 h-1 ) and excellent stereoselectivities (up to >99 %). Although systematic prediction of absolute enantioselectivity of OYE variants remains a challenge, "scaffold sampling" was confirmed as a promising addition to protein engineers' collection of strategies.
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Affiliation(s)
- Nathalie Nett
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Strasse 4, 35032, Marburg, Germany
| | - Sabine Duewel
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Strasse 4, 35032, Marburg, Germany
| | - Alexandra Annelis Richter
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Strasse 4, 35032, Marburg, Germany
| | - Sabrina Hoebenreich
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Strasse 4, 35032, Marburg, Germany
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Brenna E, Crotti M, Gatti FG, Marinoni L, Monti D, Quaiato S. Exploitation of a Multienzymatic Stereoselective Cascade Process in the Synthesis of 2-Methyl-3-Substituted Tetrahydrofuran Precursors. J Org Chem 2017; 82:2114-2122. [PMID: 28094943 DOI: 10.1021/acs.joc.6b02927] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Enantiopure 2-methyl-3-substituted tetrahydrofurans are key precursors of several biologically active products (drugs, flavors, and agrochemicals). Thus, a stereocontrolled and efficient methodology for the obtainment of these synthons is highly desirable. We exploited a two-step multienzymatic stereoselective cascade reduction of α-bromo-α,β-unsaturated ketones to give the corresponding bromohydrins in good yields, with high ee and de values. The cascade process is catalyzed by an ene-reductase and an alcohol dehydrogenase. Further manipulations of these bromohydrins, by two diastereodivergent routes, allowed the preparation of the tetrahydrofuran synthons. One route is based on a lipase catalyzed cleavage of the protecting group. The second route is characterized by a camphor sulfonic acid mediated isomerization of a β-hydroxyepoxide to give the tetrahydrofuran-2-ol. Finally, the synthesis of the most odorous and pleasant stereoisomer of the roasted meat aroma, i.e., (2S,3R)-2-methyl-3-thioacetate tetrahydrofuran, is reported as well.
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Affiliation(s)
- Elisabetta Brenna
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano , P.zza Leonardo da Vinci 32, 20133 Milano, Italy.,The Protein Factory, Politecnico di Milano and Università degli Studi dell'Insubria , Via Mancinelli 7, 20131 Milano, Italy
| | - Michele Crotti
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano , P.zza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Francesco G Gatti
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano , P.zza Leonardo da Vinci 32, 20133 Milano, Italy.,The Protein Factory, Politecnico di Milano and Università degli Studi dell'Insubria , Via Mancinelli 7, 20131 Milano, Italy
| | - Ludovico Marinoni
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano , P.zza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Daniela Monti
- Istituto di Chimica del Riconoscimento Molecolare C.N.R. , Via Mario Bianco, 9, 20131, Milano, Italy
| | - Sara Quaiato
- Dipartimento di Chimica, Materiali ed Ingegneria Chimica "G. Natta", Politecnico di Milano , P.zza Leonardo da Vinci 32, 20133 Milano, Italy
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19
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Brenna E, Distante F, Gatti FG, Gatti G. Substituent and catalyst effects on GAC lactonization of γ-hydroxy esters. Catal Sci Technol 2017. [DOI: 10.1039/c6cy02177h] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
The effect of catalyst, substituent and leaving group on reactivity was probed experimentally and computationally rationalized.
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Affiliation(s)
- Elisabetta Brenna
- Dipartimento di Chimica
- Materiali ed Ingegneria Chimica “G. Natta”
- Politecnico di Milano
- 20133 Milano
- Italy
| | - Francesco Distante
- Dipartimento di Chimica
- Materiali ed Ingegneria Chimica “G. Natta”
- Politecnico di Milano
- 20133 Milano
- Italy
| | - Francesco G. Gatti
- Dipartimento di Chimica
- Materiali ed Ingegneria Chimica “G. Natta”
- Politecnico di Milano
- 20133 Milano
- Italy
| | - Giuseppe Gatti
- Dipartimento di Scienze Biomolecolari Scuola di Farmacia
- Università degli Studi di Urbino
- 61029 Urbino
- Italy
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20
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Monti D, Forchin MC, Crotti M, Parmeggiani F, Gatti FG, Brenna E, Riva S. Cascade Coupling of Ene-Reductases and ω-Transaminases for the Stereoselective Synthesis of Diastereomerically Enriched Amines. ChemCatChem 2015. [DOI: 10.1002/cctc.201500424] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Daniela Monti
- Istituto di Chimica del Riconoscimento Molecolare; CNR; Via Mario Bianco 9 20131 Milano Italy
| | - Maria Chiara Forchin
- Istituto di Chimica del Riconoscimento Molecolare; CNR; Via Mario Bianco 9 20131 Milano Italy
| | - Michele Crotti
- Politecnico di Milano, Department of Chemistry; Materials and Chemical Engineering “Giulio Natta”; Via Mancinelli 7 20131 Milano Italy
| | - Fabio Parmeggiani
- Politecnico di Milano, Department of Chemistry; Materials and Chemical Engineering “Giulio Natta”; Via Mancinelli 7 20131 Milano Italy
| | - Francesco G. Gatti
- Politecnico di Milano, Department of Chemistry; Materials and Chemical Engineering “Giulio Natta”; Via Mancinelli 7 20131 Milano Italy
| | - Elisabetta Brenna
- Politecnico di Milano, Department of Chemistry; Materials and Chemical Engineering “Giulio Natta”; Via Mancinelli 7 20131 Milano Italy
| | - Sergio Riva
- Istituto di Chimica del Riconoscimento Molecolare; CNR; Via Mario Bianco 9 20131 Milano Italy
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21
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Turrini NG, Hall M, Faber K. Enzymatic Synthesis of Optically Active Lactones via
Asymmetric Bioreduction using Ene-Reductases from the Old Yellow Enzyme Family. Adv Synth Catal 2015. [DOI: 10.1002/adsc.201500094] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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22
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